| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is phnI [H]
Identifier: 53720463
GI number: 53720463
Start: 3417193
End: 3418407
Strand: Reverse
Name: phnI [H]
Synonym: BPSL2855
Alternate gene names: 53720463
Gene position: 3418407-3417193 (Counterclockwise)
Preceding gene: 53720464
Following gene: 53720462
Centisome position: 83.9
GC content: 71.44
Gene sequence:
>1215_bases ATGTACGTGGCAGTCAAGGGCGGCGAGCGGGCGATCGAGGCGTCGTGGCGTTTGCTCGACCAAGCGCGGCGCGGCGACCC CGCCGTGCCCGAGCTGAGCGTCGAGCAGATTCGCGAGCAGCAGCGCCTCGCGGTCGCGCGCGTGATGACGGAAGGCTCGC TGTACGACGAGGCGCTGGCGGCGCTCGCGATCAAGCAGGCGGCGGGCGATCTCGTCGAGGCGATCTTCCTGCTGCGCGCA TACCGGACGACGCTGCCGCGCTTCGGCTACACCGCGCCGATCGATACCGGCGCGATGCGGCTCGAGCGACGGATCTCGGC AACGTTCAAGGACATCCCGGGCGGCCAGTTGCTCGGCCCGACCTACGATTACACGCAGCGGCTGCTCGATTTCGCGCTGC TCGCCGAAGGCGGCGCAGCGCGGCACGAGCCGCACGAGGCCGAATCGGCGCGCGCCGCGGCCGACGCAGGCTCGCCGCCG CCGCATGCGACGCATGCGCCGCCGCCCGCGGCTGCGCGCGTGATCGCGCTCCTGAACGACGAAGGCCTGATCGAAGAGGA GCGGCCGACGGCGGTCGGCGCCGAGCCGGGCGACCTGTCGCGCGAGCCGCTCGCGTTTCCGGCCGATCGCGCGACGCGCC TGCAGAATCTCGCACGCGGCGACGAAGGTTTTCTGCTCGCGATGGGCTACGCGACGCAGCGCGGCTACGGTCATTCGCAT CCGTTCGCGGGCGAGCTGCGCTTTGGCGCCGTCGCCGTCGAAATGGCGCTCGACGAGCTCGACGGCGAGACGATCGAGAT CGGCGAGCTCGACGTGACCGAGTGCCAGATGATCAACCATTTTTCCGGCGGCGACGGCGAGCCGCCTCGCTTCACGCAGG GCTACGGCCTCGCGTTCGGCCATTCGGAGCGCAAGGCGATCGCGATGGCGCTCGTCGATCGCGCGCTGCGCGCGTCCGAG CTCGGCGAAGCCGCGCACTCGCCGCCGCAGGATCAGGAGTTCGTGCTGTCGCACAGCGACAACGTCGAGGCGTCCGGCTT CGTCCAGCACCTGAAGCTGCCGCACTACGTCGATTTCCAGTCCGAGCTCGAGCTCGTGCGCCGCCTGCGCGCCGGGCATG CGGCGCAGGCGGGAGCGGGCGCGGGCGCGAACGCGCACGAGAACGCGCCCGCCCGTGCCGAACGCGCCGACACGCACACC GAGGAGTCCCGATGA
Upstream 100 bases:
>100_bases CGCAATTCGCCCCGCGCTTTCCGTGCGGAATCGATTGCTACCTGGTGTGCGGCGACATGCTGATCGGCCTGCCGCGCACG ACGATCGTGGAGGCAGGCTG
Downstream 100 bases:
>100_bases ACGCGCCCGACCATTGCGCGGCCGCCGCGCCCGACACGCACGCCGCCGAAGGCTACAACTTCGCGTACCTCGACGAGCAG ACGAAGCGGATGATCCGCCG
Product: putative phosphonate metabolism PhnI protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MYVAVKGGERAIEASWRLLDQARRGDPAVPELSVEQIREQQRLAVARVMTEGSLYDEALAALAIKQAAGDLVEAIFLLRA YRTTLPRFGYTAPIDTGAMRLERRISATFKDIPGGQLLGPTYDYTQRLLDFALLAEGGAARHEPHEAESARAAADAGSPP PHATHAPPPAAARVIALLNDEGLIEEERPTAVGAEPGDLSREPLAFPADRATRLQNLARGDEGFLLAMGYATQRGYGHSH PFAGELRFGAVAVEMALDELDGETIEIGELDVTECQMINHFSGGDGEPPRFTQGYGLAFGHSERKAIAMALVDRALRASE LGEAAHSPPQDQEFVLSHSDNVEASGFVQHLKLPHYVDFQSELELVRRLRAGHAAQAGAGAGANAHENAPARAERADTHT EESR
Sequences:
>Translated_404_residues MYVAVKGGERAIEASWRLLDQARRGDPAVPELSVEQIREQQRLAVARVMTEGSLYDEALAALAIKQAAGDLVEAIFLLRA YRTTLPRFGYTAPIDTGAMRLERRISATFKDIPGGQLLGPTYDYTQRLLDFALLAEGGAARHEPHEAESARAAADAGSPP PHATHAPPPAAARVIALLNDEGLIEEERPTAVGAEPGDLSREPLAFPADRATRLQNLARGDEGFLLAMGYATQRGYGHSH PFAGELRFGAVAVEMALDELDGETIEIGELDVTECQMINHFSGGDGEPPRFTQGYGLAFGHSERKAIAMALVDRALRASE LGEAAHSPPQDQEFVLSHSDNVEASGFVQHLKLPHYVDFQSELELVRRLRAGHAAQAGAGAGANAHENAPARAERADTHT EESR >Mature_404_residues MYVAVKGGERAIEASWRLLDQARRGDPAVPELSVEQIREQQRLAVARVMTEGSLYDEALAALAIKQAAGDLVEAIFLLRA YRTTLPRFGYTAPIDTGAMRLERRISATFKDIPGGQLLGPTYDYTQRLLDFALLAEGGAARHEPHEAESARAAADAGSPP PHATHAPPPAAARVIALLNDEGLIEEERPTAVGAEPGDLSREPLAFPADRATRLQNLARGDEGFLLAMGYATQRGYGHSH PFAGELRFGAVAVEMALDELDGETIEIGELDVTECQMINHFSGGDGEPPRFTQGYGLAFGHSERKAIAMALVDRALRASE LGEAAHSPPQDQEFVLSHSDNVEASGFVQHLKLPHYVDFQSELELVRRLRAGHAAQAGAGAGANAHENAPARAERADTHT EESR
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3626
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnI family [H]
Homologues:
Organism=Escherichia coli, GI1790537, Length=370, Percent_Identity=59.4594594594595, Blast_Score=419, Evalue=1e-118,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008773 [H]
Pfam domain/function: PF05861 PhnI [H]
EC number: NA
Molecular weight: Translated: 43527; Mature: 43527
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVAVKGGERAIEASWRLLDQARRGDPAVPELSVEQIREQQRLAVARVMTEGSLYDEALA CEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH ALAIKQAAGDLVEAIFLLRAYRTTLPRFGYTAPIDTGAMRLERRISATFKDIPGGQLLGP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC TYDYTQRLLDFALLAEGGAARHEPHEAESARAAADAGSPPPHATHAPPPAAARVIALLND CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEEEECC EGLIEEERPTAVGAEPGDLSREPLAFPADRATRLQNLARGDEGFLLAMGYATQRGYGHSH CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECHHHCCCCCCC PFAGELRFGAVAVEMALDELDGETIEIGELDVTECQMINHFSGGDGEPPRFTQGYGLAFG CCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEC HSERKAIAMALVDRALRASELGEAAHSPPQDQEFVLSHSDNVEASGFVQHLKLPHYVDFQ CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCHH SELELVRRLRAGHAAQAGAGAGANAHENAPARAERADTHTEESR HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC >Mature Secondary Structure MYVAVKGGERAIEASWRLLDQARRGDPAVPELSVEQIREQQRLAVARVMTEGSLYDEALA CEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH ALAIKQAAGDLVEAIFLLRAYRTTLPRFGYTAPIDTGAMRLERRISATFKDIPGGQLLGP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC TYDYTQRLLDFALLAEGGAARHEPHEAESARAAADAGSPPPHATHAPPPAAARVIALLND CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEEEECC EGLIEEERPTAVGAEPGDLSREPLAFPADRATRLQNLARGDEGFLLAMGYATQRGYGHSH CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECHHHCCCCCCC PFAGELRFGAVAVEMALDELDGETIEIGELDVTECQMINHFSGGDGEPPRFTQGYGLAFG CCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEC HSERKAIAMALVDRALRASELGEAAHSPPQDQEFVLSHSDNVEASGFVQHLKLPHYVDFQ CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCHH SELELVRRLRAGHAAQAGAGAGANAHENAPARAERADTHTEESR HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]