| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is pabB [H]
Identifier: 53720434
GI number: 53720434
Start: 3376582
End: 3378600
Strand: Reverse
Name: pabB [H]
Synonym: BPSL2825
Alternate gene names: 53720434
Gene position: 3378600-3376582 (Counterclockwise)
Preceding gene: 53720435
Following gene: 53720427
Centisome position: 82.92
GC content: 72.26
Gene sequence:
>2019_bases GTGAGAGGCAGGATGACTGACGAAGCGGGCGCGGTTTTCGCGCTCTTCGACGATTGCGACTCGACCGCGGCGGCGCGCTC GAGTCGTTTGTATTCGGGCTTCTCGCACGAGCGGGCCTGCGCCGATCCGGCCGGCCTCGACGCGGTGTGCGCGGCCGTCG CCGACGACGCGCGGCGCGGGCTGCACGCCGTCGTGCTCGGCGACTACGAGTTCGGGCGCGACCTGCAGCTCGGCAAGCGC GGCGGCGGCGCGTTGCGGTTCCTGCTGTTCGCCGAATGCAGGATGCTCTCGCGCGAGGAGGCCGACGCGTGGCTCGCGTC GCGCGACGGCGGCTCGGCCGAGCCGTCGGCGGCGGGCGTCGCGCACGTGACGAAGAGCGTCGCGCGCGACGCGTTCGACG CGGCGATCGCCGCCGTGCACGATGCGCTGCGCGCGGGCGATTCGTATCAGATCAACTACACGTACCGGCTGCATTTCGAT GCGTTCGGCGCGCCGCTCGCGCTGTATCGCCGCCTGCGGGCGCGCCAGCCGGTGCGCTACGGCGCGCTCGTCGCGCTGCC GGGCGGCGCGTGGATCGTATCGTGCTCGCCCGAGCTGTTCGTCGAGAAGACGGGCGCGTTGCTGCGCGCGCGGCCGATGA AAGGCACCGCGCCTCGCTCGGACGATCCGCGCGAGGATGCGGCCGCCGCGCGCTTTCTCGCGAACGATGCGAAGAATCGC GCCGAGAACGTGATGATCGTCGATCTGCTGCGCAACGATCTCGCGCGCATCGCGCGCACCGGATCGGTGACGGTGCCGGC GTTGTTCTCGGTCGAGCCGTATGCGTCGGTGTGGCAGATGACGTCGACGGTCGAGGCGGGCATCGTCGAAGGCGCGACGT TCGCCGACGTGCTGCGCGCGCTCTTTCCGTGCGGCTCGATCACGGGCGCGCCGAAGCACAGGACGATGCAACTGATCGAT GCGCTCGAGACGACGCCGCGCGGACTCTATACGGGCGCGATCGGCTGGCTCGATGCGGAGGCGCGTGCGGACGGCGCCGA GCCTGCCGCAGGCGCGTTCGCGCCGGAGCGTGCGGCGAGCTCGTCCCCAGGCACGGCGTCGGATGGCGCATGCGCGGGCG AAACCGCGTCGAAGCAGGCGTCGAAGCGTGCCGGCGCGACAAGCCCGGCCGGCGCGTGCGGCGATTTCTGCCTGTCGGTC GCGATCCGCACGCTGACGCTCGACGCGCCGTCGGCCGGCGGCGAGCGGCGCGGCACGATGGGCGTCGGCGCGGGCATCGT GCTCGACAGCGTTGCCGCCGACGAATACGCGGAGTGCGAATTGAAGGCGCGTTTCCTGACCGACGCCGAGCCCGGCTTCC AGTTGTTCGAGACGATGCTCGCCACGCGTGACGCCGGCGTGCGCCATCTCGACCGCCATGTCGCGCGGCTGCGCGCGAGT GCCGACGCGCTCGGCTTCGCGTTCGACGAAGCGGCGGCCAGGCAGCGCATCGGCGCGCGCTGCGTGCAGCTCGGCGACGG CGAGCATCGCTTGCGCGTCGCGCTCGCGAAGGACGGCGTGCTCGACATCGTGGCCGCGCCGCTCGCGCCGCTCGCGGGCG CCGCGGTGGCCGTGTTGCTCGCGCCCGAGCACGGGTTCGCGCCGATGCGCTCGGGCGACTTCCTGCTCGCGCACAAGACG ACGCGCCGCGCCGATTACGATCGCGCGTGGAAAGCCGCGCAGGCGTGCGGTGCGTTCGACATGCTGTTCTTCAACGAACG CGGCGAATTGACCGAAGGCGGGCGCACGAGCGTATTCGTGAAGCTGGCCGGGCGCTGGTTCACGCCGCCGCTGTCGTCGG GCGTGTTGCCGGGCGTGATGCGCGGCGCGCTGCTCGACGATCCGGCATGGCAGGCGTCCGAGCGTGTAATGACGCTGGAC GACGTGCTGCGCGCCGACGCGCTGATGCTGACGAACGCGTTGCGCGGCGCGATGCCCGCGCAACTCGTGCGGGCCGCCGG CGCGGCGGCACCGCGATAG
Upstream 100 bases:
>100_bases GTCGCTCGCGGAAGGCGGCCCGCGTCACAGCCCGCAGAGCAAGAGCTGGTTCGACCGCGTGAAGAGCTTCTTCGAGTGAC GCCCGGCGTGCGGCCCGCAG
Downstream 100 bases:
>100_bases GCGCGCGAAGAGCGGCCGGGCGGCCGGGCGGCCGCACGCATCGCCCTCGCGCTTCGGCTCGCAAAAAGCGGCATCCCGCA CGTGCGGGATGCCGCTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 672; Mature: 672
Protein sequence:
>672_residues MRGRMTDEAGAVFALFDDCDSTAAARSSRLYSGFSHERACADPAGLDAVCAAVADDARRGLHAVVLGDYEFGRDLQLGKR GGGALRFLLFAECRMLSREEADAWLASRDGGSAEPSAAGVAHVTKSVARDAFDAAIAAVHDALRAGDSYQINYTYRLHFD AFGAPLALYRRLRARQPVRYGALVALPGGAWIVSCSPELFVEKTGALLRARPMKGTAPRSDDPREDAAAARFLANDAKNR AENVMIVDLLRNDLARIARTGSVTVPALFSVEPYASVWQMTSTVEAGIVEGATFADVLRALFPCGSITGAPKHRTMQLID ALETTPRGLYTGAIGWLDAEARADGAEPAAGAFAPERAASSSPGTASDGACAGETASKQASKRAGATSPAGACGDFCLSV AIRTLTLDAPSAGGERRGTMGVGAGIVLDSVAADEYAECELKARFLTDAEPGFQLFETMLATRDAGVRHLDRHVARLRAS ADALGFAFDEAAARQRIGARCVQLGDGEHRLRVALAKDGVLDIVAAPLAPLAGAAVAVLLAPEHGFAPMRSGDFLLAHKT TRRADYDRAWKAAQACGAFDMLFFNERGELTEGGRTSVFVKLAGRWFTPPLSSGVLPGVMRGALLDDPAWQASERVMTLD DVLRADALMLTNALRGAMPAQLVRAAGAAAPR
Sequences:
>Translated_672_residues MRGRMTDEAGAVFALFDDCDSTAAARSSRLYSGFSHERACADPAGLDAVCAAVADDARRGLHAVVLGDYEFGRDLQLGKR GGGALRFLLFAECRMLSREEADAWLASRDGGSAEPSAAGVAHVTKSVARDAFDAAIAAVHDALRAGDSYQINYTYRLHFD AFGAPLALYRRLRARQPVRYGALVALPGGAWIVSCSPELFVEKTGALLRARPMKGTAPRSDDPREDAAAARFLANDAKNR AENVMIVDLLRNDLARIARTGSVTVPALFSVEPYASVWQMTSTVEAGIVEGATFADVLRALFPCGSITGAPKHRTMQLID ALETTPRGLYTGAIGWLDAEARADGAEPAAGAFAPERAASSSPGTASDGACAGETASKQASKRAGATSPAGACGDFCLSV AIRTLTLDAPSAGGERRGTMGVGAGIVLDSVAADEYAECELKARFLTDAEPGFQLFETMLATRDAGVRHLDRHVARLRAS ADALGFAFDEAAARQRIGARCVQLGDGEHRLRVALAKDGVLDIVAAPLAPLAGAAVAVLLAPEHGFAPMRSGDFLLAHKT TRRADYDRAWKAAQACGAFDMLFFNERGELTEGGRTSVFVKLAGRWFTPPLSSGVLPGVMRGALLDDPAWQASERVMTLD DVLRADALMLTNALRGAMPAQLVRAAGAAAPR >Mature_672_residues MRGRMTDEAGAVFALFDDCDSTAAARSSRLYSGFSHERACADPAGLDAVCAAVADDARRGLHAVVLGDYEFGRDLQLGKR GGGALRFLLFAECRMLSREEADAWLASRDGGSAEPSAAGVAHVTKSVARDAFDAAIAAVHDALRAGDSYQINYTYRLHFD AFGAPLALYRRLRARQPVRYGALVALPGGAWIVSCSPELFVEKTGALLRARPMKGTAPRSDDPREDAAAARFLANDAKNR AENVMIVDLLRNDLARIARTGSVTVPALFSVEPYASVWQMTSTVEAGIVEGATFADVLRALFPCGSITGAPKHRTMQLID ALETTPRGLYTGAIGWLDAEARADGAEPAAGAFAPERAASSSPGTASDGACAGETASKQASKRAGATSPAGACGDFCLSV AIRTLTLDAPSAGGERRGTMGVGAGIVLDSVAADEYAECELKARFLTDAEPGFQLFETMLATRDAGVRHLDRHVARLRAS ADALGFAFDEAAARQRIGARCVQLGDGEHRLRVALAKDGVLDIVAAPLAPLAGAAVAVLLAPEHGFAPMRSGDFLLAHKT TRRADYDRAWKAAQACGAFDMLFFNERGELTEGGRTSVFVKLAGRWFTPPLSSGVLPGVMRGALLDDPAWQASERVMTLD DVLRADALMLTNALRGAMPAQLVRAAGAAAPR
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=235, Percent_Identity=41.7021276595745, Blast_Score=177, Evalue=2e-45, Organism=Escherichia coli, GI1787518, Length=223, Percent_Identity=31.8385650224215, Blast_Score=90, Evalue=5e-19, Organism=Escherichia coli, GI1786809, Length=177, Percent_Identity=27.1186440677966, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6320935, Length=213, Percent_Identity=31.924882629108, Blast_Score=107, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6324361, Length=240, Percent_Identity=29.5833333333333, Blast_Score=96, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 70785; Mature: 70785
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRMTDEAGAVFALFDDCDSTAAARSSRLYSGFSHERACADPAGLDAVCAAVADDARRG CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC LHAVVLGDYEFGRDLQLGKRGGGALRFLLFAECRMLSREEADAWLASRDGGSAEPSAAGV EEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH AHVTKSVARDAFDAAIAAVHDALRAGDSYQINYTYRLHFDAFGAPLALYRRLRARQPVRY HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCC GALVALPGGAWIVSCSPELFVEKTGALLRARPMKGTAPRSDDPREDAAAARFLANDAKNR CEEEEECCCCEEEECCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AENVMIVDLLRNDLARIARTGSVTVPALFSVEPYASVWQMTSTVEAGIVEGATFADVLRA HCCEEEHHHHHHHHHHHHHCCCEEECEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHH LFPCGSITGAPKHRTMQLIDALETTPRGLYTGAIGWLDAEARADGAEPAAGAFAPERAAS HCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCEEECCHHCCCCCCCCCCCCCCHHHCC SSPGTASDGACAGETASKQASKRAGATSPAGACGDFCLSVAIRTLTLDAPSAGGERRGTM CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCC GVGAGIVLDSVAADEYAECELKARFLTDAEPGFQLFETMLATRDAGVRHLDRHVARLRAS CCCCHHHHHHHHCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADALGFAFDEAAARQRIGARCVQLGDGEHRLRVALAKDGVLDIVAAPLAPLAGAAVAVLL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEEEEE APEHGFAPMRSGDFLLAHKTTRRADYDRAWKAAQACGAFDMLFFNERGELTEGGRTSVFV CCCCCCCCCCCCCEEEEECCHHCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEE KLAGRWFTPPLSSGVLPGVMRGALLDDPAWQASERVMTLDDVLRADALMLTNALRGAMPA EECCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHCCEECHHHHHHHHHHHHHHHHHCCHHH QLVRAAGAAAPR HHHHHHCCCCCC >Mature Secondary Structure MRGRMTDEAGAVFALFDDCDSTAAARSSRLYSGFSHERACADPAGLDAVCAAVADDARRG CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC LHAVVLGDYEFGRDLQLGKRGGGALRFLLFAECRMLSREEADAWLASRDGGSAEPSAAGV EEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH AHVTKSVARDAFDAAIAAVHDALRAGDSYQINYTYRLHFDAFGAPLALYRRLRARQPVRY HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCC GALVALPGGAWIVSCSPELFVEKTGALLRARPMKGTAPRSDDPREDAAAARFLANDAKNR CEEEEECCCCEEEECCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AENVMIVDLLRNDLARIARTGSVTVPALFSVEPYASVWQMTSTVEAGIVEGATFADVLRA HCCEEEHHHHHHHHHHHHHCCCEEECEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHH LFPCGSITGAPKHRTMQLIDALETTPRGLYTGAIGWLDAEARADGAEPAAGAFAPERAAS HCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCEEECCHHCCCCCCCCCCCCCCHHHCC SSPGTASDGACAGETASKQASKRAGATSPAGACGDFCLSVAIRTLTLDAPSAGGERRGTM CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCC GVGAGIVLDSVAADEYAECELKARFLTDAEPGFQLFETMLATRDAGVRHLDRHVARLRAS CCCCHHHHHHHHCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADALGFAFDEAAARQRIGARCVQLGDGEHRLRVALAKDGVLDIVAAPLAPLAGAAVAVLL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEEEEE APEHGFAPMRSGDFLLAHKTTRRADYDRAWKAAQACGAFDMLFFNERGELTEGGRTSVFV CCCCCCCCCCCCCEEEEECCHHCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEE KLAGRWFTPPLSSGVLPGVMRGALLDDPAWQASERVMTLDDVLRADALMLTNALRGAMPA EECCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHCCEECHHHHHHHHHHHHHHHHHCCHHH QLVRAAGAAAPR HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2123867; 7584024; 9384377 [H]