| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is wcbI
Identifier: 53720408
GI number: 53720408
Start: 3345661
End: 3346599
Strand: Reverse
Name: wcbI
Synonym: BPSL2799
Alternate gene names: NA
Gene position: 3346599-3345661 (Counterclockwise)
Preceding gene: 53720409
Following gene: 53720407
Centisome position: 82.13
GC content: 52.5
Gene sequence:
>939_bases TTGATGGCACAACGAAAGAAATATTCGGTGTACGGCTCGTGTCAGGCGCCGGCGTTAGCCAAGATGCTGAACAGTTGTCC GACATTCGCCCGCGACTGGGAACTGGTGGAGATGGAGCCGTGCTTTGTCGCCAGCGAAGAGCAAATCGATCGTCATCTCG CGGAAACGATACCGAAGCTCGATCTATTTCTTTATCAACCTGTTTCGGAGGGGTATCGAGGAGAAAAGTACTCGTCGGTA TTTCTGAGGAATAGCATGCCGCCGGGAGGGAACGCCTTGTCGGTGCAATACATGCATTGGGAAGGCTATCATCCCACCGT CAATTCACCATACGGTTTGCCGCCGCATCCGGAAGGTTATGTTGATGCCTTGATCGCGGGAGCCGTCGTCATGGATGTGG ACAAGGAAACCTATCTCCGGCACTTGGAGGAGATCGGCGCGTCTCTACGCATCGATATCGACGAGATCGAAAGCTGGTGC GTCGACGAGCTGAAGACTCGGGAAGTCGGTGAAAACGACGGTGGGAAGCAGATCGACATTTCCGTTACCGATTTTATTTT GGCTAACTGTCGTCAGAAGCGACTGTTCTACACGATGAATCATCCGACCGCGGCATTGATGCGCGAAATCGCGGCACGAT GCATGCTGGCGCTCGGCTATACCTATTCGGATATCAGCTTTGATCAGAATCTCGATCCTCTGGATGTGACCAAGATGTCC TTGTATCCGATATATCGAGATTGCTTCGATTTTTCAGAATTGAACAGGATGAACGAGTATCAGGTGCTTTACAAGAAGAA GGCCTACGAACCGTATCTCCTGGAGCAGTTCGAGTGGTTTGAGCGCTCGCCGAAGGCCGACGTTTCCGCGTTCTTCGATC GTGTCGCCGCAAATCGTCGCTGGGTTCGAACGGCGTTGCGCAGGGCTTTTGAATCATGA
Upstream 100 bases:
>100_bases CCGAGTTTGCGGAGCGCTTTGGCGACATTCGGAAAAGCAGCGACTACGTCAGCCTTATCCGCTGGGCAGGCGCTCAAGTT GCCTAACGTACGGAGATCGT
Downstream 100 bases:
>100_bases AGGTATTTCTGGTGGGCAGCACGGGCTACATCGGCAAGACATTGTTCGATGCATGCAGCCGGCGCTGGAGAACGCTGGGA ACTTCGACGCGCGATGGCGC
Product: putative capsular polysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MMAQRKKYSVYGSCQAPALAKMLNSCPTFARDWELVEMEPCFVASEEQIDRHLAETIPKLDLFLYQPVSEGYRGEKYSSV FLRNSMPPGGNALSVQYMHWEGYHPTVNSPYGLPPHPEGYVDALIAGAVVMDVDKETYLRHLEEIGASLRIDIDEIESWC VDELKTREVGENDGGKQIDISVTDFILANCRQKRLFYTMNHPTAALMREIAARCMLALGYTYSDISFDQNLDPLDVTKMS LYPIYRDCFDFSELNRMNEYQVLYKKKAYEPYLLEQFEWFERSPKADVSAFFDRVAANRRWVRTALRRAFES
Sequences:
>Translated_312_residues MMAQRKKYSVYGSCQAPALAKMLNSCPTFARDWELVEMEPCFVASEEQIDRHLAETIPKLDLFLYQPVSEGYRGEKYSSV FLRNSMPPGGNALSVQYMHWEGYHPTVNSPYGLPPHPEGYVDALIAGAVVMDVDKETYLRHLEEIGASLRIDIDEIESWC VDELKTREVGENDGGKQIDISVTDFILANCRQKRLFYTMNHPTAALMREIAARCMLALGYTYSDISFDQNLDPLDVTKMS LYPIYRDCFDFSELNRMNEYQVLYKKKAYEPYLLEQFEWFERSPKADVSAFFDRVAANRRWVRTALRRAFES >Mature_312_residues MMAQRKKYSVYGSCQAPALAKMLNSCPTFARDWELVEMEPCFVASEEQIDRHLAETIPKLDLFLYQPVSEGYRGEKYSSV FLRNSMPPGGNALSVQYMHWEGYHPTVNSPYGLPPHPEGYVDALIAGAVVMDVDKETYLRHLEEIGASLRIDIDEIESWC VDELKTREVGENDGGKQIDISVTDFILANCRQKRLFYTMNHPTAALMREIAARCMLALGYTYSDISFDQNLDPLDVTKMS LYPIYRDCFDFSELNRMNEYQVLYKKKAYEPYLLEQFEWFERSPKADVSAFFDRVAANRRWVRTALRRAFES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36102; Mature: 36102
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAQRKKYSVYGSCQAPALAKMLNSCPTFARDWELVEMEPCFVASEEQIDRHLAETIPKL CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCEECCHHHHHHHHHHHCCHH DLFLYQPVSEGYRGEKYSSVFLRNSMPPGGNALSVQYMHWEGYHPTVNSPYGLPPHPEGY HHEEECCHHCCCCCCHHHHEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCHH VDALIAGAVVMDVDKETYLRHLEEIGASLRIDIDEIESWCVDELKTREVGENDGGKQIDI HHHHHHHHHHEECCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEE SVTDFILANCRQKRLFYTMNHPTAALMREIAARCMLALGYTYSDISFDQNLDPLDVTKMS EHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH LYPIYRDCFDFSELNRMNEYQVLYKKKAYEPYLLEQFEWFERSPKADVSAFFDRVAANRR HHHHHHHHHCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHH WVRTALRRAFES HHHHHHHHHHCC >Mature Secondary Structure MMAQRKKYSVYGSCQAPALAKMLNSCPTFARDWELVEMEPCFVASEEQIDRHLAETIPKL CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCEECCHHHHHHHHHHHCCHH DLFLYQPVSEGYRGEKYSSVFLRNSMPPGGNALSVQYMHWEGYHPTVNSPYGLPPHPEGY HHEEECCHHCCCCCCHHHHEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCHH VDALIAGAVVMDVDKETYLRHLEEIGASLRIDIDEIESWCVDELKTREVGENDGGKQIDI HHHHHHHHHHEECCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEE SVTDFILANCRQKRLFYTMNHPTAALMREIAARCMLALGYTYSDISFDQNLDPLDVTKMS EHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH LYPIYRDCFDFSELNRMNEYQVLYKKKAYEPYLLEQFEWFERSPKADVSAFFDRVAANRR HHHHHHHHHCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHH WVRTALRRAFES HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA