| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is wcaL [C]
Identifier: 53720382
GI number: 53720382
Start: 3310355
End: 3311515
Strand: Reverse
Name: wcaL [C]
Synonym: BPSL2773
Alternate gene names: 53720382
Gene position: 3311515-3310355 (Counterclockwise)
Preceding gene: 53720383
Following gene: 53720381
Centisome position: 81.27
GC content: 68.13
Gene sequence:
>1161_bases ATGACGATCGATATCGCCGGCGGCCGGCATCGCGATGCGCTGCCGAAGCGCGATGCCGGGGCCGGGGCGCGTGCGCGCAT GAAGATCGTGCAGGTCCTCGAATCGAGCGCGACGGGCACGCTGTCGATGGTATGCCTGATCGCGAACCGCCTCGCGCGCG AAGGGCACGACGTGCACGTCGTCTATTCGCTGCGCCCCGACACGCCCGCGAACTTTCACGCGTTGTTCGACGCGACGGTC AAGCTGCGCCATATCCAGATGAAGGGTGTGCCGCTGCTGCCGATGTTGCTTGAATTGCGCCGCACGTTGGTCGGCATCGG GCCGGACGTCGTGCATCTGCATTCATCGTTTGCGGGATTCCTCGGCAGAATCGGAACGCTGTTCGCGTTGCGCGAAGCGG CGTTCTTCTATAGTCCGCATTGCATCTCGTTCATGCGGCGCGACATTTCGGCGTTCAAGCGAGCGGCGTTCGTCGCGCTC GAAAGGATCGCTTGCGCGAAGCGCTGCCTCTACGTTGCGTGCTCGGACAGCGAGCGTGACGCGGTGCGCGTGCACCTGCG CCAGCCGGTCGTCGTGGTCGAGAACGCGGTGGGCGCGATGCCCGCGCCCGCCGCCGAGCCCGACGGCGCGCGCGAGACGG TGCTGCGGATCGTGACGGTCGGCGGCATTCGCGTGCAGAAGAATCCGCGGCTCTTCGCCGAAATCGCGCGCCGCCTGTGC GGCTCGCGTGTGCGCTTCGCGTGGATCGGCGACGGCGATGCCGCGCTCAAGGCGGAGTTGCGCGACGCCGGCGTCGAGGT TGCCGGTTGGCTCGGCCGCGGCGAAGTCCTCGCGCGATTGCGGCGCACGGACGTATATTTATCGACGTCGTCTTGGGAGG GCATGCCCGTGTCGGTCATCGAGGCGATGCTGCTCGGCTTGCCCGTCGTCGCGTCGGCGTGCGCGGGAAACGTCGACGTC GTACGGCACTTGCAGACCGGCGCGATCTTTCGCGGTGCCGACGACGCGGTCGAATTGCTCGCGTCGCTCGAGCGCGACGC GGCGCTGCGCGCGCGTCTCGCGCACGCGGCAAGGCAGGAGGCGCGCGAGCGTTTCGGCGAGGCGCGCTTCTTCCGTCAAC TGGCGCGGGTTTATGCGTCGCGGCCCGCGCGCGTATCTTGA
Upstream 100 bases:
>100_bases ACGATCCCGCGCGGCTGAAGCGCCTCGAATGGACGGCCGTGATCGCGCGATCGGGCGTGCTCGCGCATATCGAGGCGGCG GCCTCGATGCGAGGTGTGCG
Downstream 100 bases:
>100_bases GGATTCGCCGCCCCGAGCGTCACGCGCCGCCGCATGGCATCGGCGCGCGGCGCGCACGAGGCGGCTCATTGGGAGATTTG ACCTATGAACGTAGCAATCA
Product: putative glycosyltransferase protein
Products: NA
Alternate protein names: ORF7 [H]
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MTIDIAGGRHRDALPKRDAGAGARARMKIVQVLESSATGTLSMVCLIANRLAREGHDVHVVYSLRPDTPANFHALFDATV KLRHIQMKGVPLLPMLLELRRTLVGIGPDVVHLHSSFAGFLGRIGTLFALREAAFFYSPHCISFMRRDISAFKRAAFVAL ERIACAKRCLYVACSDSERDAVRVHLRQPVVVVENAVGAMPAPAAEPDGARETVLRIVTVGGIRVQKNPRLFAEIARRLC GSRVRFAWIGDGDAALKAELRDAGVEVAGWLGRGEVLARLRRTDVYLSTSSWEGMPVSVIEAMLLGLPVVASACAGNVDV VRHLQTGAIFRGADDAVELLASLERDAALRARLAHAARQEARERFGEARFFRQLARVYASRPARVS
Sequences:
>Translated_386_residues MTIDIAGGRHRDALPKRDAGAGARARMKIVQVLESSATGTLSMVCLIANRLAREGHDVHVVYSLRPDTPANFHALFDATV KLRHIQMKGVPLLPMLLELRRTLVGIGPDVVHLHSSFAGFLGRIGTLFALREAAFFYSPHCISFMRRDISAFKRAAFVAL ERIACAKRCLYVACSDSERDAVRVHLRQPVVVVENAVGAMPAPAAEPDGARETVLRIVTVGGIRVQKNPRLFAEIARRLC GSRVRFAWIGDGDAALKAELRDAGVEVAGWLGRGEVLARLRRTDVYLSTSSWEGMPVSVIEAMLLGLPVVASACAGNVDV VRHLQTGAIFRGADDAVELLASLERDAALRARLAHAARQEARERFGEARFFRQLARVYASRPARVS >Mature_385_residues TIDIAGGRHRDALPKRDAGAGARARMKIVQVLESSATGTLSMVCLIANRLAREGHDVHVVYSLRPDTPANFHALFDATVK LRHIQMKGVPLLPMLLELRRTLVGIGPDVVHLHSSFAGFLGRIGTLFALREAAFFYSPHCISFMRRDISAFKRAAFVALE RIACAKRCLYVACSDSERDAVRVHLRQPVVVVENAVGAMPAPAAEPDGARETVLRIVTVGGIRVQKNPRLFAEIARRLCG SRVRFAWIGDGDAALKAELRDAGVEVAGWLGRGEVLARLRRTDVYLSTSSWEGMPVSVIEAMLLGLPVVASACAGNVDVV RHLQTGAIFRGADDAVELLASLERDAALRARLAHAARQEARERFGEARFFRQLARVYASRPARVS
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 42154; Mature: 42022
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDIAGGRHRDALPKRDAGAGARARMKIVQVLESSATGTLSMVCLIANRLAREGHDVHV CEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEE VYSLRPDTPANFHALFDATVKLRHIQMKGVPLLPMLLELRRTLVGIGPDVVHLHSSFAGF EEEECCCCCCCHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LGRIGTLFALREAAFFYSPHCISFMRRDISAFKRAAFVALERIACAKRCLYVACSDSERD HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCC AVRVHLRQPVVVVENAVGAMPAPAAEPDGARETVLRIVTVGGIRVQKNPRLFAEIARRLC CEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHEECCEEEECCCHHHHHHHHHHC GSRVRFAWIGDGDAALKAELRDAGVEVAGWLGRGEVLARLRRTDVYLSTSSWEGMPVSVI CCCEEEEEECCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHEEEEEECCCCCCCHHHH EAMLLGLPVVASACAGNVDVVRHLQTGAIFRGADDAVELLASLERDAALRARLAHAARQE HHHHHHHHHHHHHHCCCHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ARERFGEARFFRQLARVYASRPARVS HHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TIDIAGGRHRDALPKRDAGAGARARMKIVQVLESSATGTLSMVCLIANRLAREGHDVHV EEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEE VYSLRPDTPANFHALFDATVKLRHIQMKGVPLLPMLLELRRTLVGIGPDVVHLHSSFAGF EEEECCCCCCCHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LGRIGTLFALREAAFFYSPHCISFMRRDISAFKRAAFVALERIACAKRCLYVACSDSERD HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCC AVRVHLRQPVVVVENAVGAMPAPAAEPDGARETVLRIVTVGGIRVQKNPRLFAEIARRLC CEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHEECCEEEECCCHHHHHHHHHHC GSRVRFAWIGDGDAALKAELRDAGVEVAGWLGRGEVLARLRRTDVYLSTSSWEGMPVSVI CCCEEEEEECCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHEEEEEECCCCCCCHHHH EAMLLGLPVVASACAGNVDVVRHLQTGAIFRGADDAVELLASLERDAALRARLAHAARQE HHHHHHHHHHHHHHCCCHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ARERFGEARFFRQLARVYASRPARVS HHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7896702 [H]