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The map label for this gene is yrbH [C]

Identifier: 53720379

GI number: 53720379

Start: 3307838

End: 3308833

Strand: Reverse

Name: yrbH [C]

Synonym: BPSL2770

Alternate gene names: 53720379

Gene position: 3308833-3307838 (Counterclockwise)

Preceding gene: 53720380

Following gene: 53720377

Centisome position: 81.21

GC content: 65.96

Gene sequence:

>996_bases
GTGCGACGGTGCGCGCCGCAATATTCCCCCCCATTTTCCATGGCCCATGACGGCTCCCAGATGAACCATCACAACTATCT
TGATTCCGCGCGGCAAGTCTTCGATATCGAGTCGCGCGCGCTCGCGAGTCTCTCGGCACGCGTGGGCGACTCGTTCGGCG
ACGCGGTCGACGCGATCCTGCGCTCGAGTGGCCGCGTGGTCGTTTGCGGCATGGGCAAATCCGGGATCATCGGGCGCAAG
ATCGCGGCGACGTTCGCGAGCACCGGAACGCCGAGCTTTTTCATGCATCCGGGCGAGGCGTACCACGGCGACCTCGGCAT
GGTGACGTCGGCCGACACGTTTCTCGCGATCTCGTATTCGGGCGAGACGGACGAAGTGATCAAGCTGATTCCGTTTCTGA
AAAGCAACCGGAATTATCTTGTCGCGCTGACGGGCAACGCGCGATCGACGCTCGCGCAAGCGGCGCACAGCCATCTCGAC
GCGGGCGTCGAGCAGGAAGCGTGTCCGCTTCAGCTCGCACCGACTTCGTCGACCACGGCCGCGCTCGCGATGGGCGACGC
ACTCGCCGTCACGCTGATGAAGGCACGCGGCTTTCGCCCGGAGAACTTCGCGCGCTTCCACCCGGGCGGCTCGCTCGGCC
GCCGCCTGCTGTCGAAGGTCGACGACGAAATGACCGTCGACGGCCTGCCGTTCGTCGACGAGCGCGCGCCGGCGATCGAC
GTGCTGCAGGCGATGACGCGGGGCCGGCTCGGGCTCGCGATCGTGCGGCGCGAAACGGGCTTCGGAATCGTCACCGACGG
CGATGTCCGTCGCGCGATCGAGGCGTATGGAGACACGCTGTTCCGGCGCGCCGCGTCGGATCTGATGTCGGCGGATCCGG
CGATGGTGCCGCTCGGCACGCGCGTGGAAGACGCGTTGCTGATGATGGAGGCGCGGCGCATCAACGCGCTGCTCGTATTC
GACGGTGAAGACGTCGTCGGCGTGTTCAAGAAATAA

Upstream 100 bases:

>100_bases
GACGACGCATATCGGCCGTTGCTCGACGAATGGGCCCGGCATGCCGTCGTCCAATGAGGGCGCCGCGCGCCGCAGCGGCC
GCCGGCTTCATGCAGCGTGC

Downstream 100 bases:

>100_bases
GGAGGCGGCACGCGGCCGGATATTTATTCCGGATTTCGAAACATCCACCGCGATCGAAGAGGAACGGCCGTCACGCGAAG
CGAAAGACGAATCGGCGCGC

Product: putative capsule expression protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MRRCAPQYSPPFSMAHDGSQMNHHNYLDSARQVFDIESRALASLSARVGDSFGDAVDAILRSSGRVVVCGMGKSGIIGRK
IAATFASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSNRNYLVALTGNARSTLAQAAHSHLD
AGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKARGFRPENFARFHPGGSLGRRLLSKVDDEMTVDGLPFVDERAPAID
VLQAMTRGRLGLAIVRRETGFGIVTDGDVRRAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDALLMMEARRINALLVF
DGEDVVGVFKK

Sequences:

>Translated_331_residues
MRRCAPQYSPPFSMAHDGSQMNHHNYLDSARQVFDIESRALASLSARVGDSFGDAVDAILRSSGRVVVCGMGKSGIIGRK
IAATFASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSNRNYLVALTGNARSTLAQAAHSHLD
AGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKARGFRPENFARFHPGGSLGRRLLSKVDDEMTVDGLPFVDERAPAID
VLQAMTRGRLGLAIVRRETGFGIVTDGDVRRAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDALLMMEARRINALLVF
DGEDVVGVFKK
>Mature_331_residues
MRRCAPQYSPPFSMAHDGSQMNHHNYLDSARQVFDIESRALASLSARVGDSFGDAVDAILRSSGRVVVCGMGKSGIIGRK
IAATFASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSNRNYLVALTGNARSTLAQAAHSHLD
AGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKARGFRPENFARFHPGGSLGRRLLSKVDDEMTVDGLPFVDERAPAID
VLQAMTRGRLGLAIVRRETGFGIVTDGDVRRAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDALLMMEARRINALLVF
DGEDVVGVFKK

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=308, Percent_Identity=48.0519480519481, Blast_Score=265, Evalue=3e-72,
Organism=Escherichia coli, GI87082151, Length=299, Percent_Identity=45.1505016722408, Blast_Score=228, Evalue=5e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 35515; Mature: 35515

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRCAPQYSPPFSMAHDGSQMNHHNYLDSARQVFDIESRALASLSARVGDSFGDAVDAIL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RSSGRVVVCGMGKSGIIGRKIAATFASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYS
HCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEECCCEEEEEEEC
GETDEVIKLIPFLKSNRNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTA
CCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHH
ALAMGDALAVTLMKARGFRPENFARFHPGGSLGRRLLSKVDDEMTVDGLPFVDERAPAID
HHHHCHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCCEECCCCCCCCCCCHHH
VLQAMTRGRLGLAIVRRETGFGIVTDGDVRRAIEAYGDTLFRRAASDLMSADPAMVPLGT
HHHHHHCCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
RVEDALLMMEARRINALLVFDGEDVVGVFKK
CHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MRRCAPQYSPPFSMAHDGSQMNHHNYLDSARQVFDIESRALASLSARVGDSFGDAVDAIL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RSSGRVVVCGMGKSGIIGRKIAATFASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYS
HCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEECCCEEEEEEEC
GETDEVIKLIPFLKSNRNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTA
CCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHH
ALAMGDALAVTLMKARGFRPENFARFHPGGSLGRRLLSKVDDEMTVDGLPFVDERAPAID
HHHHCHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCCEECCCCCCCCCCCHHH
VLQAMTRGRLGLAIVRRETGFGIVTDGDVRRAIEAYGDTLFRRAASDLMSADPAMVPLGT
HHHHHHCCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
RVEDALLMMEARRINALLVFDGEDVVGVFKK
CHHHHHHHHHHHCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]