| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is 53720355
Identifier: 53720355
GI number: 53720355
Start: 3287868
End: 3288323
Strand: Reverse
Name: 53720355
Synonym: BPSL2745
Alternate gene names: NA
Gene position: 3288323-3287868 (Counterclockwise)
Preceding gene: 53720356
Following gene: 53720353
Centisome position: 80.7
GC content: 67.54
Gene sequence:
>456_bases ATGCCGTTTCTCCCCGCATCCTTATGCCGCGTGAACAGGAGGTTCGCGATGTCGAGTTCGGAATCGCTGGAAGGCGGATG CGCGTGCGGCGCGATTCGTTACCGGATCGTCGGCACGCCGAACGACGCGGGCTTTTGTCATTGCCGGCTGTGCCAGCGGA CGACGGGCGCCGCCCTGATCGCCTGGGCGACGGTGCCGATCGGCGCGTTCGAGTACGTGAAGGGCGAGCCGCGCGTGTTC GTGTCGAGCGCATGGGGCGAGCGGCGTTTCTGCCCGCAGTGTGGCGCGCAGCTCGAATACCGGCGTTCGGACGCGCCTTC GACGGTCGAAGTCAATTACGCGACGCTCGACGATCCGTCGGCGATCGCGCCGAAAGCGCATACGTGGTACGCGAGCCGCA TTCCCGGCCTGGAGGTGGCGGGCGGTCTGCCGGTGCGCGACGACGGCGACCATTGA
Upstream 100 bases:
>100_bases TTTCGACGCCCCGCATGCAGGCGCGGTTCCGTCGCCGTTCGATTTCACGCCGCCTGTCGCGCGCGTCGCGAGGCGGCGCG CGCAATCGGTTGTATCGTAG
Downstream 100 bases:
>100_bases GCGCACCGTCGCGTCTTCACCGGTGTCGGCCAGCCGCGGTGACCGGGCGCGCCGCTTGCGAGCCGAGCGGCGCGAGCGCG GCGAGCGTTTTGCTGGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Gfa
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MPFLPASLCRVNRRFAMSSSESLEGGCACGAIRYRIVGTPNDAGFCHCRLCQRTTGAALIAWATVPIGAFEYVKGEPRVF VSSAWGERRFCPQCGAQLEYRRSDAPSTVEVNYATLDDPSAIAPKAHTWYASRIPGLEVAGGLPVRDDGDH
Sequences:
>Translated_151_residues MPFLPASLCRVNRRFAMSSSESLEGGCACGAIRYRIVGTPNDAGFCHCRLCQRTTGAALIAWATVPIGAFEYVKGEPRVF VSSAWGERRFCPQCGAQLEYRRSDAPSTVEVNYATLDDPSAIAPKAHTWYASRIPGLEVAGGLPVRDDGDH >Mature_150_residues PFLPASLCRVNRRFAMSSSESLEGGCACGAIRYRIVGTPNDAGFCHCRLCQRTTGAALIAWATVPIGAFEYVKGEPRVFV SSAWGERRFCPQCGAQLEYRRSDAPSTVEVNYATLDDPSAIAPKAHTWYASRIPGLEVAGGLPVRDDGDH
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16355; Mature: 16223
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFLPASLCRVNRRFAMSSSESLEGGCACGAIRYRIVGTPNDAGFCHCRLCQRTTGAALI CCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCCCCEEE AWATVPIGAFEYVKGEPRVFVSSAWGERRFCPQCGAQLEYRRSDAPSTVEVNYATLDDPS EEEECCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCC AIAPKAHTWYASRIPGLEVAGGLPVRDDGDH CCCCCCCEEEHHCCCCEEECCCCCCCCCCCC >Mature Secondary Structure PFLPASLCRVNRRFAMSSSESLEGGCACGAIRYRIVGTPNDAGFCHCRLCQRTTGAALI CCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCCCCEEE AWATVPIGAFEYVKGEPRVFVSSAWGERRFCPQCGAQLEYRRSDAPSTVEVNYATLDDPS EEEECCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCC AIAPKAHTWYASRIPGLEVAGGLPVRDDGDH CCCCCCCEEEHHCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA