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The map label for this gene is ytfH [H]

Identifier: 53720317

GI number: 53720317

Start: 3237675

End: 3238121

Strand: Reverse

Name: ytfH [H]

Synonym: BPSL2707

Alternate gene names: 53720317

Gene position: 3238121-3237675 (Counterclockwise)

Preceding gene: 53720325

Following gene: 53720316

Centisome position: 79.47

GC content: 65.32

Gene sequence:

>447_bases
ATGACGACGATGCGAAAGAACGCACCCGAGGGTGAGCAGATTACCGACAGGAAACCTTCATTGCTCGATGCGCCGCGCAA
GGGCAACGTGTACGCGTCGGAATGCCCGACGCGGCTCGTGCTCGACCGCATCGCGGACAAATGGACTGTCCTGATTCTCG
CGCTGCTGTCGCACGAGCCGCTGCGCTTCAACACGCTGCTGCGGCATATCGAGGGCCTGTCGCAGAAGGTGCTGTCGCAA
ACGCTCAAGCGGCTCGAGCGCGACGGGCTCGTCGCGCGCACCGTCTATGCGACGGTGCCGGTATCCGTCGAATATGCGTT
GACGCCGCTCGGCCACACGCTCGCGCACTCGATCACGCCGATCATCGTGTGGTCGGAGACGCACATCGACGCCGTGCTCG
ATGCGCGCACGGCCTATGACGCTCGGCAGGGGGGGGCGGGCGCCTGA

Upstream 100 bases:

>100_bases
CGGCGGGCGCCGATCGGCGCCGCGGCGCGGAAACGGACCGTCGTGCAAACGGTGCTAGTATCTACGCCACAGGTAGTTAC
CGGAAGAAACTATAGACGGG

Downstream 100 bases:

>100_bases
GTGATCGCACGCGTGCGGCGCGTCAGCGATCGGCATTGAGAAAAAAAGCGAGAAGAATAAATGCCGCGGCAATATGATTT
TTATTCTCGCCGGACGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MTTMRKNAPEGEQITDRKPSLLDAPRKGNVYASECPTRLVLDRIADKWTVLILALLSHEPLRFNTLLRHIEGLSQKVLSQ
TLKRLERDGLVARTVYATVPVSVEYALTPLGHTLAHSITPIIVWSETHIDAVLDARTAYDARQGGAGA

Sequences:

>Translated_148_residues
MTTMRKNAPEGEQITDRKPSLLDAPRKGNVYASECPTRLVLDRIADKWTVLILALLSHEPLRFNTLLRHIEGLSQKVLSQ
TLKRLERDGLVARTVYATVPVSVEYALTPLGHTLAHSITPIIVWSETHIDAVLDARTAYDARQGGAGA
>Mature_147_residues
TTMRKNAPEGEQITDRKPSLLDAPRKGNVYASECPTRLVLDRIADKWTVLILALLSHEPLRFNTLLRHIEGLSQKVLSQT
LKRLERDGLVARTVYATVPVSVEYALTPLGHTLAHSITPIIVWSETHIDAVLDARTAYDARQGGAGA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=117, Percent_Identity=41.025641025641, Blast_Score=99, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 16364; Mature: 16233

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTMRKNAPEGEQITDRKPSLLDAPRKGNVYASECPTRLVLDRIADKWTVLILALLSHEP
CCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
LRFNTLLRHIEGLSQKVLSQTLKRLERDGLVARTVYATVPVSVEYALTPLGHTLAHSITP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHEECCCEEEEEECHHHHHHHHCCCE
IIVWSETHIDAVLDARTAYDARQGGAGA
EEEECCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTMRKNAPEGEQITDRKPSLLDAPRKGNVYASECPTRLVLDRIADKWTVLILALLSHEP
CCCCCCCCCCCCCCCCCCCHHCCCCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
LRFNTLLRHIEGLSQKVLSQTLKRLERDGLVARTVYATVPVSVEYALTPLGHTLAHSITP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHEECCCEEEEEECHHHHHHHHCCCE
IIVWSETHIDAVLDARTAYDARQGGAGA
EEEECCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]