Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53720315

Identifier: 53720315

GI number: 53720315

Start: 3234027

End: 3235280

Strand: Reverse

Name: 53720315

Synonym: BPSL2705

Alternate gene names: NA

Gene position: 3235280-3234027 (Counterclockwise)

Preceding gene: 53720316

Following gene: 53720314

Centisome position: 79.4

GC content: 65.95

Gene sequence:

>1254_bases
ATGTATTGGAGAAAATCGCTGGCTGCTGCCTTGTTGGCTCCCGTCCTGACCGCCTGCGGCGGCGGAGACGATCCGCCGCC
CGCGCCCGTCGTGCGGCTGTGTCCGAAGACGATCGACTACAACACCGTGTTCACCGGCGGTTCCGGCTCGGGCGAGCTGG
TTCGCGTGCAGCTCGACACGACGAAGATGACGTTCCAGATCACGTATCTCGCGTCGCCGGTGCCGGCGACGACGGGCACC
GTGCAGCCCACCCGCGACGCGGCGCCGAACAATATCGTGACGGGAACGCTGACGGACGAGACAGGCCTGCCGACCGAGAA
GCTCAACCAGTGCACGTTCCGGCTGAACAACGCGAGCCTCGATCCGAACCGTCCGGCGCGCGTGTTCCTCGGCGAGGGGG
TGCTCGGCGGCGCGATTCCCGGCGCGACGATCCAGTTCGGCGGCGTGATCGGCGTCGGGCAGATTCCGAAGACGACGTTT
CCGTACTATCCGTTCATCAGTTTCTCCGATCAGGAGACCGATCTCTCGAAGATCGCGGGCAACTACAACCAGCTCGGCTA
TCACCAGGTGCCGTCGCAGAACTTCGCTCAGGCGGCGGTCGACGCGAAGGTCACGATCAACGCGGACGGCACGTACGTCG
AGACGGACAATTTCGGCAGGAAGAACGGCGGCCAGCCGCTCGCCTCGAGCGCGACGGTCAATCAGAAACTGACGTTGCGC
GCCGACGCGCCCGTGTTCCAGTCGCTCAACTATCAGCCTCAGGTCCCGCCGACGCTCGCCTCGCTCGATCCGTCGAAGGC
GGGCAAGGGCATCCTGATCGTGGGCAAGCTGCGCAATCAGCTGGTGCCGATCTTCATCCGCACCGGCGCGGCGAACGCGG
ACCTGACGCAAGGCGCGCCTGTCGCGGACGACGAATCGGGGATCTCGATCCTGAGCCCGCAGACGGCGATCGCCTCGGGC
TCGCAGGACGGCGAGTACACGGGCGTCGACAGCGTGCTCGATTACCGCGCGACCGCGCTCGTCGGCGCGCAGGCGACGCT
GCTCGATCCGTTCCACGCATCGCAGGTCGCGCTCACGCGCTCGCTCAATCTCGACTATACGCAGACCGTGCCGGGCGTCG
TGACGACGGTTCAGACCAATGCGGCGTCGGGGCCACCCACCGGCAAGTTCGTCTTCACGGGCGGCGTATTCGGCTTGCTC
GACATGAGCGACGTCAACAACCCGTACTTCACGGTGGGCGCGTTCGTGCAATGA

Upstream 100 bases:

>100_bases
AGTACAACCCGTTCTTCACGGTCGGCGCTTTCGTTCAGTAACGCATGACTTCGCGGCGGCGCCGGACGCCGCCGCGGACT
TCAAGATATCGAGGATTCCT

Downstream 100 bases:

>100_bases
GCGGCGCGCAGAACAGGAGACACACGGCGATGCGCGGCCCGCGCGCGCATCGCGCGATCGAAGTATCAGGAGACCTCATG
AAGAAGCTGATTGCCGCGTG

Product: putative lipoprotein

Products: NA

Alternate protein names: Large Exoprotein Involved In Heme Utilization Or Adhesion

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MYWRKSLAAALLAPVLTACGGGDDPPPAPVVRLCPKTIDYNTVFTGGSGSGELVRVQLDTTKMTFQITYLASPVPATTGT
VQPTRDAAPNNIVTGTLTDETGLPTEKLNQCTFRLNNASLDPNRPARVFLGEGVLGGAIPGATIQFGGVIGVGQIPKTTF
PYYPFISFSDQETDLSKIAGNYNQLGYHQVPSQNFAQAAVDAKVTINADGTYVETDNFGRKNGGQPLASSATVNQKLTLR
ADAPVFQSLNYQPQVPPTLASLDPSKAGKGILIVGKLRNQLVPIFIRTGAANADLTQGAPVADDESGISILSPQTAIASG
SQDGEYTGVDSVLDYRATALVGAQATLLDPFHASQVALTRSLNLDYTQTVPGVVTTVQTNAASGPPTGKFVFTGGVFGLL
DMSDVNNPYFTVGAFVQ

Sequences:

>Translated_417_residues
MYWRKSLAAALLAPVLTACGGGDDPPPAPVVRLCPKTIDYNTVFTGGSGSGELVRVQLDTTKMTFQITYLASPVPATTGT
VQPTRDAAPNNIVTGTLTDETGLPTEKLNQCTFRLNNASLDPNRPARVFLGEGVLGGAIPGATIQFGGVIGVGQIPKTTF
PYYPFISFSDQETDLSKIAGNYNQLGYHQVPSQNFAQAAVDAKVTINADGTYVETDNFGRKNGGQPLASSATVNQKLTLR
ADAPVFQSLNYQPQVPPTLASLDPSKAGKGILIVGKLRNQLVPIFIRTGAANADLTQGAPVADDESGISILSPQTAIASG
SQDGEYTGVDSVLDYRATALVGAQATLLDPFHASQVALTRSLNLDYTQTVPGVVTTVQTNAASGPPTGKFVFTGGVFGLL
DMSDVNNPYFTVGAFVQ
>Mature_417_residues
MYWRKSLAAALLAPVLTACGGGDDPPPAPVVRLCPKTIDYNTVFTGGSGSGELVRVQLDTTKMTFQITYLASPVPATTGT
VQPTRDAAPNNIVTGTLTDETGLPTEKLNQCTFRLNNASLDPNRPARVFLGEGVLGGAIPGATIQFGGVIGVGQIPKTTF
PYYPFISFSDQETDLSKIAGNYNQLGYHQVPSQNFAQAAVDAKVTINADGTYVETDNFGRKNGGQPLASSATVNQKLTLR
ADAPVFQSLNYQPQVPPTLASLDPSKAGKGILIVGKLRNQLVPIFIRTGAANADLTQGAPVADDESGISILSPQTAIASG
SQDGEYTGVDSVLDYRATALVGAQATLLDPFHASQVALTRSLNLDYTQTVPGVVTTVQTNAASGPPTGKFVFTGGVFGLL
DMSDVNNPYFTVGAFVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43650; Mature: 43650

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYWRKSLAAALLAPVLTACGGGDDPPPAPVVRLCPKTIDYNTVFTGGSGSGELVRVQLDT
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCCEEEEEEEC
TKMTFQITYLASPVPATTGTVQPTRDAAPNNIVTGTLTDETGLPTEKLNQCTFRLNNASL
EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCEEEEECCCCC
DPNRPARVFLGEGVLGGAIPGATIQFGGVIGVGQIPKTTFPYYPFISFSDQETDLSKIAG
CCCCCEEEEEECCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCEEECCCCCCHHHHHCC
NYNQLGYHQVPSQNFAQAAVDAKVTINADGTYVETDNFGRKNGGQPLASSATVNQKLTLR
CCCCCCCEECCCCHHHHHHCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEE
ADAPVFQSLNYQPQVPPTLASLDPSKAGKGILIVGKLRNQLVPIFIRTGAANADLTQGAP
ECCHHHHCCCCCCCCCCHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCC
VADDESGISILSPQTAIASGSQDGEYTGVDSVLDYRATALVGAQATLLDPFHASQVALTR
CCCCCCCEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHEECCCEEEECCCCCCCEEEEE
SLNLDYTQTVPGVVTTVQTNAASGPPTGKFVFTGGVFGLLDMSDVNNPYFTVGAFVQ
ECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCEEEEEECCCCCCCEEEEEEEEC
>Mature Secondary Structure
MYWRKSLAAALLAPVLTACGGGDDPPPAPVVRLCPKTIDYNTVFTGGSGSGELVRVQLDT
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCCEEEEEEEC
TKMTFQITYLASPVPATTGTVQPTRDAAPNNIVTGTLTDETGLPTEKLNQCTFRLNNASL
EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCEEEEECCCCC
DPNRPARVFLGEGVLGGAIPGATIQFGGVIGVGQIPKTTFPYYPFISFSDQETDLSKIAG
CCCCCEEEEEECCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCEEECCCCCCHHHHHCC
NYNQLGYHQVPSQNFAQAAVDAKVTINADGTYVETDNFGRKNGGQPLASSATVNQKLTLR
CCCCCCCEECCCCHHHHHHCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEE
ADAPVFQSLNYQPQVPPTLASLDPSKAGKGILIVGKLRNQLVPIFIRTGAANADLTQGAP
ECCHHHHCCCCCCCCCCHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCC
VADDESGISILSPQTAIASGSQDGEYTGVDSVLDYRATALVGAQATLLDPFHASQVALTR
CCCCCCCEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHEECCCEEEECCCCCCCEEEEE
SLNLDYTQTVPGVVTTVQTNAASGPPTGKFVFTGGVFGLLDMSDVNNPYFTVGAFVQ
ECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCEEEEEECCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA