| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720312
Identifier: 53720312
GI number: 53720312
Start: 3230981
End: 3231949
Strand: Reverse
Name: 53720312
Synonym: BPSL2702
Alternate gene names: NA
Gene position: 3231949-3230981 (Counterclockwise)
Preceding gene: 53720313
Following gene: 53720310
Centisome position: 79.32
GC content: 71.1
Gene sequence:
>969_bases TTGCGCACGGCAGCATGGCTTCGGTATCTCCTCGATCATGCGGAGCGTTTCGCCGCCGCGGCGGCGTCAAGCCGCGAAGC GCGCGTTGCGGCCGCCGCGCGCGACACGCTCGCGAAGGCGGGCGCGCACGCGCGGCGCGAACCGGCCGCCGACGCGGGTC TCCTCCTGAACGAACTGCTCGCGGCGCTGGAAGGCGACGGCGCATCCGTCGACGAGGCGCGCGGCAACGCATATGGCGAA CTCGCGCGCACGCCGCCCAAACGGCTGCTTGCCGCCGTCGACCGTTACCTGCCTGGTTCGAAGGCCGTGTTTGACGGCGC GCATGGCGTTGCCGACGTACTTGGCTATGACGATGCCGAACTCGGCTGGGCCGCGCTCGATTCGATCGAGCTTGGCATCG GGCACGCGCTCGCGAGCGACGGCGAAGCCGCGGACGATGCGATGCGCGGCATCGCCGCCTTCGAAGGGCCGGCGGCGGGG CGGGTGATCGACCGCGCGATCGGGCGCATATGGGGCGCGGACGAAAAGCGCGCCGACGCGTTGAGCGCGCTGGCGGCATT TTCGGCCACGCTTGCGATGAATGCGCCGATCACGCTCGACGCCTACGGCGGCGAGCACAACGGCGTCGCCGCCGCGATTC TTCGCGAGCGCGGGGATCTCGCCTCGGCGCCGGGGCTGCTCGCCGCGCTCGCCGTTTGCAGGCTCGACCGTCTGACGGGC GCGGGCAGCTTCTGGGCGTATTACCTGCTAGCGGGCGTGATGATCGCTGCGCCGCAGGCCGTGGCATCGATCGCCGCGCG GTTTCACCGCGACGCGCTGAGCGCTTGGCTCGACATGCTGCTCGCCGTGCCCGCGCGCAGCCCGATCGGCGACGCCGGCG AGGCCGCATTGGCGCGATTGGCCGCGTCGATGAGCTTCACGTCGCGGCACAATCCGATCGTTCATACGAGGCACAGGTCG ATGGGCTGA
Upstream 100 bases:
>100_bases CGCCCGAGTGCGGACACGATCCGCATCGCTATTTCTCGGATGACCCATGCCTGACAAACATAATCATCGCGTCGACGCCG AAGGCCTGTCGCTCGGCAGC
Downstream 100 bases:
>100_bases GCGGCGGCCGGCGCGAGCCGCGCTCAGATCGACAGGCAGATCTTGCCGAAGTGCTTGCCGGCCGCTTGATGGGCGAACGC GTCGGCGATGTCGTCGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MRTAAWLRYLLDHAERFAAAAASSREARVAAAARDTLAKAGAHARREPAADAGLLLNELLAALEGDGASVDEARGNAYGE LARTPPKRLLAAVDRYLPGSKAVFDGAHGVADVLGYDDAELGWAALDSIELGIGHALASDGEAADDAMRGIAAFEGPAAG RVIDRAIGRIWGADEKRADALSALAAFSATLAMNAPITLDAYGGEHNGVAAAILRERGDLASAPGLLAALAVCRLDRLTG AGSFWAYYLLAGVMIAAPQAVASIAARFHRDALSAWLDMLLAVPARSPIGDAGEAALARLAASMSFTSRHNPIVHTRHRS MG
Sequences:
>Translated_322_residues MRTAAWLRYLLDHAERFAAAAASSREARVAAAARDTLAKAGAHARREPAADAGLLLNELLAALEGDGASVDEARGNAYGE LARTPPKRLLAAVDRYLPGSKAVFDGAHGVADVLGYDDAELGWAALDSIELGIGHALASDGEAADDAMRGIAAFEGPAAG RVIDRAIGRIWGADEKRADALSALAAFSATLAMNAPITLDAYGGEHNGVAAAILRERGDLASAPGLLAALAVCRLDRLTG AGSFWAYYLLAGVMIAAPQAVASIAARFHRDALSAWLDMLLAVPARSPIGDAGEAALARLAASMSFTSRHNPIVHTRHRS MG >Mature_322_residues MRTAAWLRYLLDHAERFAAAAASSREARVAAAARDTLAKAGAHARREPAADAGLLLNELLAALEGDGASVDEARGNAYGE LARTPPKRLLAAVDRYLPGSKAVFDGAHGVADVLGYDDAELGWAALDSIELGIGHALASDGEAADDAMRGIAAFEGPAAG RVIDRAIGRIWGADEKRADALSALAAFSATLAMNAPITLDAYGGEHNGVAAAILRERGDLASAPGLLAALAVCRLDRLTG AGSFWAYYLLAGVMIAAPQAVASIAARFHRDALSAWLDMLLAVPARSPIGDAGEAALARLAASMSFTSRHNPIVHTRHRS MG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33319; Mature: 33319
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTAAWLRYLLDHAERFAAAAASSREARVAAAARDTLAKAGAHARREPAADAGLLLNELL CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHH AALEGDGASVDEARGNAYGELARTPPKRLLAAVDRYLPGSKAVFDGAHGVADVLGYDDAE HHHCCCCCCCHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCCHHHCCCHHHHHHHCCCCCH LGWAALDSIELGIGHALASDGEAADDAMRGIAAFEGPAAGRVIDRAIGRIWGADEKRADA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHH LSALAAFSATLAMNAPITLDAYGGEHNGVAAAILRERGDLASAPGLLAALAVCRLDRLTG HHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC AGSFWAYYLLAGVMIAAPQAVASIAARFHRDALSAWLDMLLAVPARSPIGDAGEAALARL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH AASMSFTSRHNPIVHTRHRSMG HHHHHHHCCCCCCEECCCCCCC >Mature Secondary Structure MRTAAWLRYLLDHAERFAAAAASSREARVAAAARDTLAKAGAHARREPAADAGLLLNELL CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHH AALEGDGASVDEARGNAYGELARTPPKRLLAAVDRYLPGSKAVFDGAHGVADVLGYDDAE HHHCCCCCCCHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCCHHHCCCHHHHHHHCCCCCH LGWAALDSIELGIGHALASDGEAADDAMRGIAAFEGPAAGRVIDRAIGRIWGADEKRADA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHH LSALAAFSATLAMNAPITLDAYGGEHNGVAAAILRERGDLASAPGLLAALAVCRLDRLTG HHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC AGSFWAYYLLAGVMIAAPQAVASIAARFHRDALSAWLDMLLAVPARSPIGDAGEAALARL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH AASMSFTSRHNPIVHTRHRSMG HHHHHHHCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA