| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720304
Identifier: 53720304
GI number: 53720304
Start: 3220452
End: 3221783
Strand: Reverse
Name: 53720304
Synonym: BPSL2694
Alternate gene names: NA
Gene position: 3221783-3220452 (Counterclockwise)
Preceding gene: 53720305
Following gene: 53720303
Centisome position: 79.07
GC content: 73.5
Gene sequence:
>1332_bases GTGCTGACGCTCGTGCCCATTACCTCTGACATCGCGACGGTTCCGGTTCTCGACGCGTTGCCCAATCCGCGAGGCGGCGC AGTGCCCGCGGCCGAGGCGGCGCTGCGCACCGCGCAACAAGCCTTCGAGCGGCGCGCCGATCCGGCCGAACCGCTCGCCG CCGCCGCGGCGGCGCTGCGGGAGGCAGGGTGGCTCGCCGCGCAACGCTTTGTCGTTGCGCTGGCTCATGCCGCGCCGCTT GCCGCGACCGAACTCCAACCGATTGCATTCGAGGCCGCGCTGCGGGATTTCCGCGCGGCGCTCGAGCGGCACAATTTGCG CGAACTCGCCTGCTCGCCGTTGCTCTTCGAGCATTACCGCGCGCTGTGCGCACTGACCGCGAGCGACTTGCGCGCGGATA CGTCGCAGGGTGCGCTCGCGCTTGCCGGCCGCCCGGTGCCGCCCGCGACACTGTATGCGCTGTCGCCGCATGCGCTCGCG CACTTGCGCGCGCGCTACGAGCAGGCGCTTCTCGGCGCGCTGCGCGCATCCGGCACGGCGGCCGACAAGGCGCTCGACGG GCTCGCCGATTGCACGGCCGAACTGGTCGGGCCGTTTCCCTATGACTTTTGGCGTCTTGCGGGGGCGTGCATGCGTGTGC TGCGGGTGCGCGGCGGTGTCGAGCTCAAGCGTTTTCTCGCGCGCTGCAATCTGCTGCTCGGCGAGCAGGCGCGCGGATTG CGCATTGCGCCCGCCGCGCTCGTCGGCGAGGCGCTTGCGCTTTTCTGGCGCGACTACGCGCTGTACGGCGCGGCGGCGGA GGACGTCGCCGATGTCGAGCTGCTGCACGACTACGGGCTGACCGTCGCGTGGCATGTCGCGGGCACGCAGGCGTCCGAGG CCCTGTGGGAGGCCGACGCCGCGCGCGCCGAAGCGGACGCGGTGCGCGGCGCGGCGACGCGCGAGCTCGGCGTCGTCACC GTCAACGCCCAGGCGTATGAGGATTTCCTGCAGACGGCCGACGCGTCGATGACCGAGCTGGCGCTCGATCCGCGCGCGGC CGATGCGGGCGCCGCGTTGCAGGCGGCGCAGGCCGCGTATCGCGTCGGCTCGGCCGCATGCGCGCTCGGTCTCGGGCACA CGGCGCTCGTTGCCGATGCGCTCGGTCTCGCATGGCGCCGCCGTGCGCATCTCGGCGCGACGGACGACGCATGCGCCAGC GCGTGCCGGCAGGCGGCCGAAGCATTGCGCGCCGCGTTGCACCGGATCGCGGCGGGCATGGCGCCGCCCGATCTGTCCGA CGCGCGCGCGGCGCTTGCGGGCGCGTTGTCGGGGGCCGGCCGCGGCGCATGA
Upstream 100 bases:
>100_bases GACCGTCTCGCGTCGGCGGTTCGGCATCGAGCGAACCGGCGGCGTTGGCGCGGCGGCATCGACGGGTTGAGGCGCCGCTT GCGGCGCGGCTTCGTTTCTG
Downstream 100 bases:
>100_bases CGGCGCATCGCGCGGCGCGTGGCGACGCGCGCCGCAAGGCCGGATTCTTGCTTTCGGCCGATGCGGCGCAATCGCGCGCG GCGCGCGTGCCGATTGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MLTLVPITSDIATVPVLDALPNPRGGAVPAAEAALRTAQQAFERRADPAEPLAAAAAALREAGWLAAQRFVVALAHAAPL AATELQPIAFEAALRDFRAALERHNLRELACSPLLFEHYRALCALTASDLRADTSQGALALAGRPVPPATLYALSPHALA HLRARYEQALLGALRASGTAADKALDGLADCTAELVGPFPYDFWRLAGACMRVLRVRGGVELKRFLARCNLLLGEQARGL RIAPAALVGEALALFWRDYALYGAAAEDVADVELLHDYGLTVAWHVAGTQASEALWEADAARAEADAVRGAATRELGVVT VNAQAYEDFLQTADASMTELALDPRAADAGAALQAAQAAYRVGSAACALGLGHTALVADALGLAWRRRAHLGATDDACAS ACRQAAEALRAALHRIAAGMAPPDLSDARAALAGALSGAGRGA
Sequences:
>Translated_443_residues MLTLVPITSDIATVPVLDALPNPRGGAVPAAEAALRTAQQAFERRADPAEPLAAAAAALREAGWLAAQRFVVALAHAAPL AATELQPIAFEAALRDFRAALERHNLRELACSPLLFEHYRALCALTASDLRADTSQGALALAGRPVPPATLYALSPHALA HLRARYEQALLGALRASGTAADKALDGLADCTAELVGPFPYDFWRLAGACMRVLRVRGGVELKRFLARCNLLLGEQARGL RIAPAALVGEALALFWRDYALYGAAAEDVADVELLHDYGLTVAWHVAGTQASEALWEADAARAEADAVRGAATRELGVVT VNAQAYEDFLQTADASMTELALDPRAADAGAALQAAQAAYRVGSAACALGLGHTALVADALGLAWRRRAHLGATDDACAS ACRQAAEALRAALHRIAAGMAPPDLSDARAALAGALSGAGRGA >Mature_443_residues MLTLVPITSDIATVPVLDALPNPRGGAVPAAEAALRTAQQAFERRADPAEPLAAAAAALREAGWLAAQRFVVALAHAAPL AATELQPIAFEAALRDFRAALERHNLRELACSPLLFEHYRALCALTASDLRADTSQGALALAGRPVPPATLYALSPHALA HLRARYEQALLGALRASGTAADKALDGLADCTAELVGPFPYDFWRLAGACMRVLRVRGGVELKRFLARCNLLLGEQARGL RIAPAALVGEALALFWRDYALYGAAAEDVADVELLHDYGLTVAWHVAGTQASEALWEADAARAEADAVRGAATRELGVVT VNAQAYEDFLQTADASMTELALDPRAADAGAALQAAQAAYRVGSAACALGLGHTALVADALGLAWRRRAHLGATDDACAS ACRQAAEALRAALHRIAAGMAPPDLSDARAALAGALSGAGRGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45981; Mature: 45981
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLVPITSDIATVPVLDALPNPRGGAVPAAEAALRTAQQAFERRADPAEPLAAAAAALR CEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH EAGWLAAQRFVVALAHAAPLAATELQPIAFEAALRDFRAALERHNLRELACSPLLFEHYR HHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ALCALTASDLRADTSQGALALAGRPVPPATLYALSPHALAHLRARYEQALLGALRASGTA HHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCH ADKALDGLADCTAELVGPFPYDFWRLAGACMRVLRVRGGVELKRFLARCNLLLGEQARGL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC RIAPAALVGEALALFWRDYALYGAAAEDVADVELLHDYGLTVAWHVAGTQASEALWEADA EECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH ARAEADAVRGAATRELGVVTVNAQAYEDFLQTADASMTELALDPRAADAGAALQAAQAAY HHHHHHHHHCCCHHCCEEEEECHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHH RVGSAACALGLGHTALVADALGLAWRRRAHLGATDDACASACRQAAEALRAALHRIAAGM HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC APPDLSDARAALAGALSGAGRGA CCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLTLVPITSDIATVPVLDALPNPRGGAVPAAEAALRTAQQAFERRADPAEPLAAAAAALR CEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH EAGWLAAQRFVVALAHAAPLAATELQPIAFEAALRDFRAALERHNLRELACSPLLFEHYR HHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ALCALTASDLRADTSQGALALAGRPVPPATLYALSPHALAHLRARYEQALLGALRASGTA HHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCH ADKALDGLADCTAELVGPFPYDFWRLAGACMRVLRVRGGVELKRFLARCNLLLGEQARGL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC RIAPAALVGEALALFWRDYALYGAAAEDVADVELLHDYGLTVAWHVAGTQASEALWEADA EECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH ARAEADAVRGAATRELGVVTVNAQAYEDFLQTADASMTELALDPRAADAGAALQAAQAAY HHHHHHHHHCCCHHCCEEEEECHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHH RVGSAACALGLGHTALVADALGLAWRRRAHLGATDDACASACRQAAEALRAALHRIAAGM HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC APPDLSDARAALAGALSGAGRGA CCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA