| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720194
Identifier: 53720194
GI number: 53720194
Start: 3104506
End: 3105051
Strand: Reverse
Name: 53720194
Synonym: BPSL2583
Alternate gene names: NA
Gene position: 3105051-3104506 (Counterclockwise)
Preceding gene: 53720195
Following gene: 53720193
Centisome position: 76.21
GC content: 59.52
Gene sequence:
>546_bases ATGACGGCACGCGTCATCAAATTTCGTACTCGATCAGGCGAGGACCTGGACGTAGCGGTCGACGGTGTCCACCATCCCGC TGTCCAGGCGATCAAGGAAATTCACCGAAAAGGTCGCCAACCGTTCAATGAGGCGCGACCGACGGGGCCCTGGATCGAGC GCCACGAATACCAAGCCCGGGTTCGAAACGGACGATTGGAGTTTCGGGAAGGCACGCGGAGAGGTGCCTGGTCGAAGAAG TTGCCCGGACAGCAGTTTCTCGAGATGGAGGAACGGAAGTTTCGTGGCGCCCAGCATCGTGCATCCGGTCAGGCGCGAGC CTCGGCCGCTGGCGTTACTGCTCGCCGTAAGGGGGCAGAGGGGCTCGCAGATCGGATCGTCGCCGAGTTCAATCGATTGG GCGAACGGGTTCCACCGATGCCGATCCACAACCGGACGGCAGAAATCGCTCGCCTGGTCGACAAGTCGAAAGTGCACGTG ATGAACGTGCTCGTCGATCGTGGCCTTCGAGCACCACGAATAAAAATTCAAACTAACCGGAATTGA
Upstream 100 bases:
>100_bases GCTCTGCGACTGACGCTGCATCCGCCGGACGCCATTAAGGCATGGGCGTCCGGCGGCCGCCGCCGATATCTACCCCCACC TCAACCCTCACTGACCAGCT
Downstream 100 bases:
>100_bases AAATTCCCCAGCGTAAGGCGCGCACCTACGCTACCGACATGGCTACGCGATGTAGCTATACGATTTACGATCAACAGGAA TCGAAATGTCGGATCTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTARVIKFRTRSGEDLDVAVDGVHHPAVQAIKEIHRKGRQPFNEARPTGPWIERHEYQARVRNGRLEFREGTRRGAWSKK LPGQQFLEMEERKFRGAQHRASGQARASAAGVTARRKGAEGLADRIVAEFNRLGERVPPMPIHNRTAEIARLVDKSKVHV MNVLVDRGLRAPRIKIQTNRN
Sequences:
>Translated_181_residues MTARVIKFRTRSGEDLDVAVDGVHHPAVQAIKEIHRKGRQPFNEARPTGPWIERHEYQARVRNGRLEFREGTRRGAWSKK LPGQQFLEMEERKFRGAQHRASGQARASAAGVTARRKGAEGLADRIVAEFNRLGERVPPMPIHNRTAEIARLVDKSKVHV MNVLVDRGLRAPRIKIQTNRN >Mature_180_residues TARVIKFRTRSGEDLDVAVDGVHHPAVQAIKEIHRKGRQPFNEARPTGPWIERHEYQARVRNGRLEFREGTRRGAWSKKL PGQQFLEMEERKFRGAQHRASGQARASAAGVTARRKGAEGLADRIVAEFNRLGERVPPMPIHNRTAEIARLVDKSKVHVM NVLVDRGLRAPRIKIQTNRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20618; Mature: 20487
Theoretical pI: Translated: 11.99; Mature: 11.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARVIKFRTRSGEDLDVAVDGVHHPAVQAIKEIHRKGRQPFNEARPTGPWIERHEYQAR CCCCEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHH VRNGRLEFREGTRRGAWSKKLPGQQFLEMEERKFRGAQHRASGQARASAAGVTARRKGAE HHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCHHHHHHCHHHHHCCHH GLADRIVAEFNRLGERVPPMPIHNRTAEIARLVDKSKVHVMNVLVDRGLRAPRIKIQTNR HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC N C >Mature Secondary Structure TARVIKFRTRSGEDLDVAVDGVHHPAVQAIKEIHRKGRQPFNEARPTGPWIERHEYQAR CCCEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHH VRNGRLEFREGTRRGAWSKKLPGQQFLEMEERKFRGAQHRASGQARASAAGVTARRKGAE HHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCHHHHHHCHHHHHCCHH GLADRIVAEFNRLGERVPPMPIHNRTAEIARLVDKSKVHVMNVLVDRGLRAPRIKIQTNR HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA