| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720190
Identifier: 53720190
GI number: 53720190
Start: 3102532
End: 3103590
Strand: Reverse
Name: 53720190
Synonym: BPSL2579
Alternate gene names: NA
Gene position: 3103590-3102532 (Counterclockwise)
Preceding gene: 53720191
Following gene: 53720189
Centisome position: 76.17
GC content: 62.51
Gene sequence:
>1059_bases ATGATCGTCCGTGGGCCGAGACCAACCGAACGGTTCTACCTCCTTCGGCGCGAGATTGCAGAGGATCGGCGTCTGTCGTG GGCGGCGCGCGGGATGCTCGTCCACCTGCTCGTAAAACCCGACTCGTGGCGCGTCAGCGTTCAGGCGCTTGTCAACGAAA CGGCTGATGCTGGCCTGTCGAGTGGCCGCGACGCCGTGTATCGGATCCTCCGAGAGCTCCAGGATGCCGGCTATCTCAGC CGCGGCCAGACGAAGAGCGATGACGGCTCGTTCGAGGCGATGGACTACATCGTTTCCGAGATCCCGAATGCACCGCTTAC GGAAAATCCGGAAGCGGCACCGCGTACGGGTTTGCCGCTCACGGGTTTGCCGTGTACGGCTGATCCGACACAAGCAAAGA ATCAATATAAACAAGGACTGAGAAAAGCACCAAAGGGCGCTGACGCGCCGCCGGTTGATCTGCTCGGCAATGAAATCGTC GAATCGGTCAGCGATCTGGCTTGCCCGGTAGACGAAATCGTCGCTGCGTATCACGAGCTCATGCCGGACAACCCGCGCGT GAAGGCGGTGCACGGCGATCGTCGCAAAGCAATTGCGGCACGCTGGCGCGAGGCGTCGAAGCTGGACTGCAAGCCGTTCG GCTACTCGACGGTCGACGACGGGCTGCGCGCCTGGCGCAAGTTCTTCGCCGTCTGCGCGCGATCCGCCTTCCTGACTGGA AAGGCAACGCCGAAGCCGGGCTGCAAGCGATTCCGCGCTGACATCGACTTCCTGACGTCGCCGTCTGGTTTCACGAAGTG CCTCGAGGGCAAGTATCAGCAGGACGTCGAGGAGCAGCAAGACGGCTCCTGGAGCGCCTCTCGCGAGGGCATTGAAGCGA AGGCAGCGGAGCTCGGAATCGTTCCGAAGGTTGGCGAGTCGTACAGCTCGCTTCGCGACCGATGCGAGGCGGAATTGCGC CGGCCCTGTCAGGCGCGACCGTCCAGAACGAGCACCGGCGGCGGCTACGAACACGTGCGCCACGAGTTTGATGCAACTCA ACGGGAGAAAGCAGCATGA
Upstream 100 bases:
>100_bases AATGCCTCGATCGACTGATAGCCGCGCTTTGCGAGGCGCGCGACAAGCTTGCGTCCGATCCGGACACGTGGAGCGCCGAA CGTGCGGACGGAGGCTCCGA
Downstream 100 bases:
>100_bases CACGGCTCATCCGACTCACCGGCTGCCAGCGCGCGGCGCTCAACGGCACGGAGATCGACGGGCGTGTCTTTGTCCAGCTC GACGTCGTGAATACGCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MIVRGPRPTERFYLLRREIAEDRRLSWAARGMLVHLLVKPDSWRVSVQALVNETADAGLSSGRDAVYRILRELQDAGYLS RGQTKSDDGSFEAMDYIVSEIPNAPLTENPEAAPRTGLPLTGLPCTADPTQAKNQYKQGLRKAPKGADAPPVDLLGNEIV ESVSDLACPVDEIVAAYHELMPDNPRVKAVHGDRRKAIAARWREASKLDCKPFGYSTVDDGLRAWRKFFAVCARSAFLTG KATPKPGCKRFRADIDFLTSPSGFTKCLEGKYQQDVEEQQDGSWSASREGIEAKAAELGIVPKVGESYSSLRDRCEAELR RPCQARPSRTSTGGGYEHVRHEFDATQREKAA
Sequences:
>Translated_352_residues MIVRGPRPTERFYLLRREIAEDRRLSWAARGMLVHLLVKPDSWRVSVQALVNETADAGLSSGRDAVYRILRELQDAGYLS RGQTKSDDGSFEAMDYIVSEIPNAPLTENPEAAPRTGLPLTGLPCTADPTQAKNQYKQGLRKAPKGADAPPVDLLGNEIV ESVSDLACPVDEIVAAYHELMPDNPRVKAVHGDRRKAIAARWREASKLDCKPFGYSTVDDGLRAWRKFFAVCARSAFLTG KATPKPGCKRFRADIDFLTSPSGFTKCLEGKYQQDVEEQQDGSWSASREGIEAKAAELGIVPKVGESYSSLRDRCEAELR RPCQARPSRTSTGGGYEHVRHEFDATQREKAA >Mature_352_residues MIVRGPRPTERFYLLRREIAEDRRLSWAARGMLVHLLVKPDSWRVSVQALVNETADAGLSSGRDAVYRILRELQDAGYLS RGQTKSDDGSFEAMDYIVSEIPNAPLTENPEAAPRTGLPLTGLPCTADPTQAKNQYKQGLRKAPKGADAPPVDLLGNEIV ESVSDLACPVDEIVAAYHELMPDNPRVKAVHGDRRKAIAARWREASKLDCKPFGYSTVDDGLRAWRKFFAVCARSAFLTG KATPKPGCKRFRADIDFLTSPSGFTKCLEGKYQQDVEEQQDGSWSASREGIEAKAAELGIVPKVGESYSSLRDRCEAELR RPCQARPSRTSTGGGYEHVRHEFDATQREKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38938; Mature: 38938
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVRGPRPTERFYLLRREIAEDRRLSWAARGMLVHLLVKPDSWRVSVQALVNETADAGLS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCC SGRDAVYRILRELQDAGYLSRGQTKSDDGSFEAMDYIVSEIPNAPLTENPEAAPRTGLPL CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TGLPCTADPTQAKNQYKQGLRKAPKGADAPPVDLLGNEIVESVSDLACPVDEIVAAYHEL CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH MPDNPRVKAVHGDRRKAIAARWREASKLDCKPFGYSTVDDGLRAWRKFFAVCARSAFLTG CCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC KATPKPGCKRFRADIDFLTSPSGFTKCLEGKYQQDVEEQQDGSWSASREGIEAKAAELGI CCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHCC VPKVGESYSSLRDRCEAELRRPCQARPSRTSTGGGYEHVRHEFDATQREKAA CCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIVRGPRPTERFYLLRREIAEDRRLSWAARGMLVHLLVKPDSWRVSVQALVNETADAGLS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCC SGRDAVYRILRELQDAGYLSRGQTKSDDGSFEAMDYIVSEIPNAPLTENPEAAPRTGLPL CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TGLPCTADPTQAKNQYKQGLRKAPKGADAPPVDLLGNEIVESVSDLACPVDEIVAAYHEL CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH MPDNPRVKAVHGDRRKAIAARWREASKLDCKPFGYSTVDDGLRAWRKFFAVCARSAFLTG CCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC KATPKPGCKRFRADIDFLTSPSGFTKCLEGKYQQDVEEQQDGSWSASREGIEAKAAELGI CCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHCC VPKVGESYSSLRDRCEAELRRPCQARPSRTSTGGGYEHVRHEFDATQREKAA CCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA