The gene/protein map for NC_006350 is currently unavailable.
Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53720163

Identifier: 53720163

GI number: 53720163

Start: 3079284

End: 3080555

Strand: Reverse

Name: 53720163

Synonym: BPSL2552

Alternate gene names: NA

Gene position: 3080555-3079284 (Counterclockwise)

Preceding gene: 53720164

Following gene: 53720162

Centisome position: 75.6

GC content: 70.91

Gene sequence:

>1272_bases
ATGGTCGCTGTGAGGCATCGATTGGCGGGCGTCGCGCTTGCCGCGTTCGCGTGCGGTGCGCTCGCGCACGACGCGCAGCC
GGCCGCAGGCGCATCGTCCGCGCACGCGGCGCACATGGCGATGGACGCCGCGACGGCCGGCGCCGCGCAAAAGACGCCGC
TCGCGACGGGGGCCGCGTTCGATGCGCGTCATCGGCTGTGGGTCGCGTGGGTCGAAGGGCAGCACGTCGTCGTCGCGCAC
TCGGACGACGCCGGGCGCACATTGGCCCCGCCCGTGACGGTCAATGCGCTGCCCGAGCCGATCTACACGAGCGCGGAGAA
CCGGCCGAAGCTCGCCGCGAGCCCGGACGGGCGCGCGATCTATGTGACGTGGTCGATGCCGCTCGATGCGCCCTACACCG
GGATGGTGCGCTTCTCACGCTCGCTCGACGGCGGCGCGACGTGGTCGGTGCCCGTCACCGTGCATCGCGATCGGCAGGCG
ATCACGCATCGTTTCGATATGCTGACGATCGATCCGCAAGGCCGCATCTTCGTCGCATGGATCGACAAGCGCGACCTCGT
CGCCGCGCAGCGGGCAGGGCGTTCGTACGATGGCGCGGCGATCTATTACGCGGTGTCGACTGACGGCGGCGCGACGTTCG
AGCCGGAACGCAAGGTGAGCGATCACACGTGCGAATGCTGCCGGATCGCGATGACGGTCGATTCCGACGGCCGCGTGCAA
GCCGCGTGGCGCAATGTGTTTCCGGGCCAGATCCGCGATCATGCGGTGGCGGTGCTGCACGCGTCGGCGGATCGCGCGGT
CGAGCCCGTGCGCGCGACGTTCTCGAACTGGCATGTCGAGGCTTGCCCGGATCACGGGCCCGCGCTCGCGATCACGGCCG
ACGGCGTGCGGCATCTCGCGTGGTTCGGCGTCGTCGACGGCAAGGCCGACGTGTTCTATTCGCGGCTCGATGCGCGCGGC
GCGCCGCTCGGCGCGCCATTTGCGTTCGGCGACGATCCGGCGGCGCCGGACGAACAGGCGTCGCATGCGGCGCTCGTCGC
GCGGCGCGACACGCTGTGGCTCGCGTGGAAGGCGTTCGACGGCGATACGATGCGCATCAGGCTGCGCCGCTCCGACGACG
GCGGCGCGCACTGGAGCGCGCCGCGCACGCTCGCGTGGACGTCCGGCGCGAGCGACAACCCGCAGTTGCTGGCCGACCGA
GGGCGCGTCTATCTGTCGTGGCGCACGCGCAACGACGGCTATCGGTTGATCGACGTGGAGGGGCAGCGATGA

Upstream 100 bases:

>100_bases
ATCGGCACTGGCTTGCGTCGTTCGGCATCGACAACGTGACCGATCGCCGCTACTACGTGTTCCATCCTTATCCGGGCCGC
ACTTTTTATGGAGAGTTGAA

Downstream 100 bases:

>100_bases
AGCGGGTGGCTTTCGCGCTCGCGGCACTCGCCGTACTGGCGAATGCCGCGCCGGGCGCGGCGCAAGAAGGGCGGTTGCCG
CAGCCGCTGAGGGCGACGGA

Product: putative lipoprotein

Products: NA

Alternate protein names: BNR Repeat-Containing Protein; Signal Peptide Protein; BNR/Asp-Box Repeat-Containing Protein; Glycosyl Hydrolase BNR Repeat-Containing Protein; Cytochrome C Biogenesis Protein; BNR/Asp-Box Repeat Domain Protein

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MVAVRHRLAGVALAAFACGALAHDAQPAAGASSAHAAHMAMDAATAGAAQKTPLATGAAFDARHRLWVAWVEGQHVVVAH
SDDAGRTLAPPVTVNALPEPIYTSAENRPKLAASPDGRAIYVTWSMPLDAPYTGMVRFSRSLDGGATWSVPVTVHRDRQA
ITHRFDMLTIDPQGRIFVAWIDKRDLVAAQRAGRSYDGAAIYYAVSTDGGATFEPERKVSDHTCECCRIAMTVDSDGRVQ
AAWRNVFPGQIRDHAVAVLHASADRAVEPVRATFSNWHVEACPDHGPALAITADGVRHLAWFGVVDGKADVFYSRLDARG
APLGAPFAFGDDPAAPDEQASHAALVARRDTLWLAWKAFDGDTMRIRLRRSDDGGAHWSAPRTLAWTSGASDNPQLLADR
GRVYLSWRTRNDGYRLIDVEGQR

Sequences:

>Translated_423_residues
MVAVRHRLAGVALAAFACGALAHDAQPAAGASSAHAAHMAMDAATAGAAQKTPLATGAAFDARHRLWVAWVEGQHVVVAH
SDDAGRTLAPPVTVNALPEPIYTSAENRPKLAASPDGRAIYVTWSMPLDAPYTGMVRFSRSLDGGATWSVPVTVHRDRQA
ITHRFDMLTIDPQGRIFVAWIDKRDLVAAQRAGRSYDGAAIYYAVSTDGGATFEPERKVSDHTCECCRIAMTVDSDGRVQ
AAWRNVFPGQIRDHAVAVLHASADRAVEPVRATFSNWHVEACPDHGPALAITADGVRHLAWFGVVDGKADVFYSRLDARG
APLGAPFAFGDDPAAPDEQASHAALVARRDTLWLAWKAFDGDTMRIRLRRSDDGGAHWSAPRTLAWTSGASDNPQLLADR
GRVYLSWRTRNDGYRLIDVEGQR
>Mature_423_residues
MVAVRHRLAGVALAAFACGALAHDAQPAAGASSAHAAHMAMDAATAGAAQKTPLATGAAFDARHRLWVAWVEGQHVVVAH
SDDAGRTLAPPVTVNALPEPIYTSAENRPKLAASPDGRAIYVTWSMPLDAPYTGMVRFSRSLDGGATWSVPVTVHRDRQA
ITHRFDMLTIDPQGRIFVAWIDKRDLVAAQRAGRSYDGAAIYYAVSTDGGATFEPERKVSDHTCECCRIAMTVDSDGRVQ
AAWRNVFPGQIRDHAVAVLHASADRAVEPVRATFSNWHVEACPDHGPALAITADGVRHLAWFGVVDGKADVFYSRLDARG
APLGAPFAFGDDPAAPDEQASHAALVARRDTLWLAWKAFDGDTMRIRLRRSDDGGAHWSAPRTLAWTSGASDNPQLLADR
GRVYLSWRTRNDGYRLIDVEGQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45665; Mature: 45665

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAVRHRLAGVALAAFACGALAHDAQPAAGASSAHAAHMAMDAATAGAAQKTPLATGAAF
CEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
DARHRLWVAWVEGQHVVVAHSDDAGRTLAPPVTVNALPEPIYTSAENRPKLAASPDGRAI
CCCCEEEEEEECCCEEEEEECCCCCCEECCCEEECCCCCCCCCCCCCCCCEEECCCCCEE
YVTWSMPLDAPYTGMVRFSRSLDGGATWSVPVTVHRDRQAITHRFDMLTIDPQGRIFVAW
EEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCHHHHEEEEEEEECCCCCEEEEE
IDKRDLVAAQRAGRSYDGAAIYYAVSTDGGATFEPERKVSDHTCECCRIAMTVDSDGRVQ
ECCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEE
AAWRNVFPGQIRDHAVAVLHASADRAVEPVRATFSNWHVEACPDHGPALAITADGVRHLA
EHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEECCCCCCEEEEECCCCEEEE
WFGVVDGKADVFYSRLDARGAPLGAPFAFGDDPAAPDEQASHAALVARRDTLWLAWKAFD
EEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECC
GDTMRIRLRRSDDGGAHWSAPRTLAWTSGASDNPQLLADRGRVYLSWRTRNDGYRLIDVE
CCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCEEECCCEEEEEEEECCCCEEEEEEC
GQR
CCC
>Mature Secondary Structure
MVAVRHRLAGVALAAFACGALAHDAQPAAGASSAHAAHMAMDAATAGAAQKTPLATGAAF
CEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
DARHRLWVAWVEGQHVVVAHSDDAGRTLAPPVTVNALPEPIYTSAENRPKLAASPDGRAI
CCCCEEEEEEECCCEEEEEECCCCCCEECCCEEECCCCCCCCCCCCCCCCEEECCCCCEE
YVTWSMPLDAPYTGMVRFSRSLDGGATWSVPVTVHRDRQAITHRFDMLTIDPQGRIFVAW
EEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCHHHHEEEEEEEECCCCCEEEEE
IDKRDLVAAQRAGRSYDGAAIYYAVSTDGGATFEPERKVSDHTCECCRIAMTVDSDGRVQ
ECCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEE
AAWRNVFPGQIRDHAVAVLHASADRAVEPVRATFSNWHVEACPDHGPALAITADGVRHLA
EHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEECCCCCCEEEEECCCCEEEE
WFGVVDGKADVFYSRLDARGAPLGAPFAFGDDPAAPDEQASHAALVARRDTLWLAWKAFD
EEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECC
GDTMRIRLRRSDDGGAHWSAPRTLAWTSGASDNPQLLADRGRVYLSWRTRNDGYRLIDVE
CCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCEEECCCEEEEEEEECCCCEEEEEEC
GQR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA