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The map label for this gene is yvdE [H]

Identifier: 53720145

GI number: 53720145

Start: 3056494

End: 3057558

Strand: Reverse

Name: yvdE [H]

Synonym: BPSL2535

Alternate gene names: 53720145

Gene position: 3057558-3056494 (Counterclockwise)

Preceding gene: 53720153

Following gene: 53720144

Centisome position: 75.04

GC content: 71.36

Gene sequence:

>1065_bases
GTGTCGGCCGGGCCCGGCGCGCACGCCGCCGCACCCTCCGGCGCGACGGGCGCGGGCGCATCGGCGGCGGGTGCCGCTGC
AGCCGGCGCGAGCGCGAAAGCCGGCTCGCCGCCGCCGGGCTTCGGCGCACCGCCCGATTTCGAGGCGTCGCGCCCGCCGC
CGCCCGGCGCGGCCACGCCCGCGCCGCCGGCGTACCTGAAACAGAGCGACACGCCGTGGTCGGTGTTCGGCCGGATCATC
GCGGCGCGCGCGCGGCGGCTCTTCGATCGCGCCGGCCAACGGATCACGCAGCGTACGCTGCGCATCGGCGTGTCGGCGCG
CATCTTCCATCCGGAAGTCGGCGCGCCGGGGCTGCGCGGCAAGACGCTGCAGTATCTCGAGGAATCGATCGCGCACTGGG
TGATGTCGCGCGACGTGCTCGTGTTCATGATTCCGACCGTCGGCCATCAGGGGATGCTGCATCCGAGCAACATCCGGCTG
CGCGACTACGCGAAGCATCTGGACGGGCTGTTGCTGCAGGGCGGCGCCGACGTGTCGCCGCAGACCTACGCGGCGTCCGA
CGCGCGTCCCGAATGGCCCGGCGATCGCGTGCGCGACATGTACGAGCTCGAACTGCTGCACGAGTTCGTCGAGTCGGGCA
AGCCGGTGCTCGGCGTGTGCCGCGGCTGCCAGCTCATCAACGTCGCGTTCGGCGGCTCGCTCTATCAGGACATCGCGAGC
GACGTGCCCACCGCGGGCGCGCACGTCAGCGAGCACTACGATCAGCACCGGCATTCGATCCGCTTTCCGGACGGCTCGAC
GCTCGCGAACATGTTTCCCGGCCGGCGCGAGGCGATCGTCAACTCGATTCACCATCAGGCGATCCGCGACATCGGCCGCG
ATCTGAACATCGAGGCGGTATCGGCGGAAGACGGGATCATCGAAGGGATCCGCTATCGCCGCGCGCCGTTCGTCGTCGGC
GTGCAGTGGCACCCGGAGTTTCATCGCGCGGGCGGCCCGGAGCTGCTCGACTGCACGCCGCTGCTCGACACGTTCCTGCG
CGCGGCGCGCGAGACGCGGCTATAG

Upstream 100 bases:

>100_bases
GCAGGATATCGGCGATCCGGGCTCGGCGCCGAGCGGCGCGATCGCCGAGCCCGGCGCGCCCGGCATCGCCGCCGGCGGCA
CGGGCGTGGAGCCGGCCGCC

Downstream 100 bases:

>100_bases
CCGGCGCGCGACGCGCTTTCTTCGCCGGCGGGAACGAGACGGGCCGCACTTCGGTGCGGCCCGTCGTTCGTTCTGCGTGC
GCGGCGTCGGCCCGCCGCGC

Product: putative transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MSAGPGAHAAAPSGATGAGASAAGAAAAGASAKAGSPPPGFGAPPDFEASRPPPPGAATPAPPAYLKQSDTPWSVFGRII
AARARRLFDRAGQRITQRTLRIGVSARIFHPEVGAPGLRGKTLQYLEESIAHWVMSRDVLVFMIPTVGHQGMLHPSNIRL
RDYAKHLDGLLLQGGADVSPQTYAASDARPEWPGDRVRDMYELELLHEFVESGKPVLGVCRGCQLINVAFGGSLYQDIAS
DVPTAGAHVSEHYDQHRHSIRFPDGSTLANMFPGRREAIVNSIHHQAIRDIGRDLNIEAVSAEDGIIEGIRYRRAPFVVG
VQWHPEFHRAGGPELLDCTPLLDTFLRAARETRL

Sequences:

>Translated_354_residues
MSAGPGAHAAAPSGATGAGASAAGAAAAGASAKAGSPPPGFGAPPDFEASRPPPPGAATPAPPAYLKQSDTPWSVFGRII
AARARRLFDRAGQRITQRTLRIGVSARIFHPEVGAPGLRGKTLQYLEESIAHWVMSRDVLVFMIPTVGHQGMLHPSNIRL
RDYAKHLDGLLLQGGADVSPQTYAASDARPEWPGDRVRDMYELELLHEFVESGKPVLGVCRGCQLINVAFGGSLYQDIAS
DVPTAGAHVSEHYDQHRHSIRFPDGSTLANMFPGRREAIVNSIHHQAIRDIGRDLNIEAVSAEDGIIEGIRYRRAPFVVG
VQWHPEFHRAGGPELLDCTPLLDTFLRAARETRL
>Mature_353_residues
SAGPGAHAAAPSGATGAGASAAGAAAAGASAKAGSPPPGFGAPPDFEASRPPPPGAATPAPPAYLKQSDTPWSVFGRIIA
ARARRLFDRAGQRITQRTLRIGVSARIFHPEVGAPGLRGKTLQYLEESIAHWVMSRDVLVFMIPTVGHQGMLHPSNIRLR
DYAKHLDGLLLQGGADVSPQTYAASDARPEWPGDRVRDMYELELLHEFVESGKPVLGVCRGCQLINVAFGGSLYQDIASD
VPTAGAHVSEHYDQHRHSIRFPDGSTLANMFPGRREAIVNSIHHQAIRDIGRDLNIEAVSAEDGIIEGIRYRRAPFVVGV
QWHPEFHRAGGPELLDCTPLLDTFLRAARETRL

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=221, Percent_Identity=28.5067873303167, Blast_Score=85, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 37962; Mature: 37831

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAGPGAHAAAPSGATGAGASAAGAAAAGASAKAGSPPPGFGAPPDFEASRPPPPGAATP
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APPAYLKQSDTPWSVFGRIIAARARRLFDRAGQRITQRTLRIGVSARIFHPEVGAPGLRG
CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCC
KTLQYLEESIAHWVMSRDVLVFMIPTVGHQGMLHPSNIRLRDYAKHLDGLLLQGGADVSP
HHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCEEECCCCCCCC
QTYAASDARPEWPGDRVRDMYELELLHEFVESGKPVLGVCRGCQLINVAFGGSLYQDIAS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEHHCCHHHHHHHH
DVPTAGAHVSEHYDQHRHSIRFPDGSTLANMFPGRREAIVNSIHHQAIRDIGRDLNIEAV
CCCCCCCHHHHHHHHHHCEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
SAEDGIIEGIRYRRAPFVVGVQWHPEFHRAGGPELLDCTPLLDTFLRAARETRL
CCCCCHHHHHHHCCCCEEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAGPGAHAAAPSGATGAGASAAGAAAAGASAKAGSPPPGFGAPPDFEASRPPPPGAATP
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APPAYLKQSDTPWSVFGRIIAARARRLFDRAGQRITQRTLRIGVSARIFHPEVGAPGLRG
CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCC
KTLQYLEESIAHWVMSRDVLVFMIPTVGHQGMLHPSNIRLRDYAKHLDGLLLQGGADVSP
HHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCEEECCCCCCCC
QTYAASDARPEWPGDRVRDMYELELLHEFVESGKPVLGVCRGCQLINVAFGGSLYQDIAS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEHHCCHHHHHHHH
DVPTAGAHVSEHYDQHRHSIRFPDGSTLANMFPGRREAIVNSIHHQAIRDIGRDLNIEAV
CCCCCCCHHHHHHHHHHCEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
SAEDGIIEGIRYRRAPFVVGVQWHPEFHRAGGPELLDCTPLLDTFLRAARETRL
CCCCCHHHHHHHCCCCEEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]