| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is pcpB [H]
Identifier: 53720142
GI number: 53720142
Start: 3050669
End: 3052336
Strand: Reverse
Name: pcpB [H]
Synonym: BPSL2532
Alternate gene names: 53720142
Gene position: 3052336-3050669 (Counterclockwise)
Preceding gene: 53720144
Following gene: 53720137
Centisome position: 74.91
GC content: 71.82
Gene sequence:
>1668_bases TTGCGTATCGACGAGGTCCTTATGGCAGTCGTTCCGCTCTCCACGCCTCCCGTGCTGATCGTCGGCGCCGGTCCGACGGG GCTCGCCGCCGCGCTTTGTCTCGCGCGCGCCCGCGTGCCGGTGCGTATCGTCGACAAGGCGGCCCGACCCGCGCGTTACT CGCGCGCGATCGGCATTCAGGCCAGAACGCTCGAGCTCCTCGAGCAGCAGCGCGTCGTCGACCGGTTCGTCGAGCTCGGC CATCGCGCGCGGCTCGCGATCCTGTACTCGGCCGGCCAGCGCATCGCCGAGCTCGACTTCGATCCGCTGCAGACGCGCTA TCCGTACCTGCTGTTTCTCGACCAGACCGTCACCGAGCGTTTGCTGACCGAGCATCTCGCGACGTTCGACGTGCACGTCG AGCGCGGCGTGACGCTCACGCATTGCGCGCAGCCGGAAGGCGCGCTCGACGTGCGGCTGCGCCACGGCGACGGCCGCGAC GAGCGTCTGCAGCCGTCGTACGTCGTCGCGGCGGACGGCGCGCGCAGCACGGTCCGGCATTTGCTCGACGTCGATTTCGT CGGGCATGCGTTCGAGCAGACGTTCATGCTCGCCGATCTCGAGCTCGGCGCCGACTGGCCCGACGACGAGATCCATCTGT TCACGACGGGCGAGGGCCTCGCCGGGCTCTTCCCGATGGGCGGCGGCCGCTACCGGCTCGTCGCCGATCGCCCGCCGCGC AACGGCGCGCTCGACGACGAGCGCGAGCCGTCGCTCGAGCTGTGCCGCGAAGTCGTGCGCGCGCGCGTGACGCCGGATCT GAAGGTCGGCGATCTCGCGTGGTCGTCGTATTTTCATCTGCACAGCCGAATGGTCGCGCGGCTGCGCGTCGGGCGCGTGT TCTTCGCGGGCGACGCGGCGCACGTGCACAGCCCGGCGGGCGCGCAGGGGATGAACACGGGTATCCAGGAGGCGTTCAAT CTCGGCTGGAAGCTCGCGCGCGTGCTGGCGGGCAACGCCCCCGAGCGGCTGCTCGAGACGTATCACGCGGAGCGCCATCC GATCGAGCGCGACGTGCTGCGCCAGACGAGCTTCGCGACGCAGGTCGTCGAGGCGGATCGCGGGCCGCTCAAGCTGCTGC GCGATCACATCGTGCCGATCCTCGCGTCGTTCGGGCCGCTGCGCGATGCGGCGCGCCGCACGGTCAGCGAACTCGCGATC CAGTATCGGAAGAGTCCGCTCACGCTCGAGCGCGTGCTCGACGGCGGGCCGCGCGCGGGCGAGCGCGCGCCGGACGCGCT CGTGCACGTGCTCGACGGGCCGCTTGGCAAGGCGCCGGGCGTCGCGCGCCTCTTCGATCTGCACGACCCCGCGCATTTCA CGCTGCTCGTGCTCGAGCCGCGCGAGGCGATCGACGACACGCTGCCGTCGGACCCCGGCGAGGACGGCCGCGCGCTTGCC GGCGCGCTCGAGCGGATCATGCCGGGCGCGGTGCGCTGCTGGTGCGCGACGGATGCGGAAGGCGAGGGCGCGCCGCTGCT GGCCGATGCGTACGGGCGCGCGCGGCCCGTGTTCTATCTGCTGCGCCCGGACGGCTACGTCGCCGCGCGCGGGCGCCCGG CGACCGACGCGAACGCGCTGCTGCGCCATTGCGAGACGTGGTTTTCGGGGATGCGGCTGGAGACTTGA
Upstream 100 bases:
>100_bases CCATACCTCGAACCGCGCCGGCCGAATCGGTCAACCGCCCGCCCGGCCGCTCGGCCACCCGCTATGGATGCGGCGCGGCG GCGGGCGTAGACTGCGAATG
Downstream 100 bases:
>100_bases AAGCGGCCGCGCTCGCCGGGCGCGGGCGGCTGCGCGTCGGGCGGCGCCATCGTGGGTTGCGTGCGGCGAGCCCCCGGCGT ATGCATAGGCAAGCGATGCC
Product: putative oxygenase
Products: NA
Alternate protein names: Pentachlorophenol hydroxylase [H]
Number of amino acids: Translated: 555; Mature: 555
Protein sequence:
>555_residues MRIDEVLMAVVPLSTPPVLIVGAGPTGLAAALCLARARVPVRIVDKAARPARYSRAIGIQARTLELLEQQRVVDRFVELG HRARLAILYSAGQRIAELDFDPLQTRYPYLLFLDQTVTERLLTEHLATFDVHVERGVTLTHCAQPEGALDVRLRHGDGRD ERLQPSYVVAADGARSTVRHLLDVDFVGHAFEQTFMLADLELGADWPDDEIHLFTTGEGLAGLFPMGGGRYRLVADRPPR NGALDDEREPSLELCREVVRARVTPDLKVGDLAWSSYFHLHSRMVARLRVGRVFFAGDAAHVHSPAGAQGMNTGIQEAFN LGWKLARVLAGNAPERLLETYHAERHPIERDVLRQTSFATQVVEADRGPLKLLRDHIVPILASFGPLRDAARRTVSELAI QYRKSPLTLERVLDGGPRAGERAPDALVHVLDGPLGKAPGVARLFDLHDPAHFTLLVLEPREAIDDTLPSDPGEDGRALA GALERIMPGAVRCWCATDAEGEGAPLLADAYGRARPVFYLLRPDGYVAARGRPATDANALLRHCETWFSGMRLET
Sequences:
>Translated_555_residues MRIDEVLMAVVPLSTPPVLIVGAGPTGLAAALCLARARVPVRIVDKAARPARYSRAIGIQARTLELLEQQRVVDRFVELG HRARLAILYSAGQRIAELDFDPLQTRYPYLLFLDQTVTERLLTEHLATFDVHVERGVTLTHCAQPEGALDVRLRHGDGRD ERLQPSYVVAADGARSTVRHLLDVDFVGHAFEQTFMLADLELGADWPDDEIHLFTTGEGLAGLFPMGGGRYRLVADRPPR NGALDDEREPSLELCREVVRARVTPDLKVGDLAWSSYFHLHSRMVARLRVGRVFFAGDAAHVHSPAGAQGMNTGIQEAFN LGWKLARVLAGNAPERLLETYHAERHPIERDVLRQTSFATQVVEADRGPLKLLRDHIVPILASFGPLRDAARRTVSELAI QYRKSPLTLERVLDGGPRAGERAPDALVHVLDGPLGKAPGVARLFDLHDPAHFTLLVLEPREAIDDTLPSDPGEDGRALA GALERIMPGAVRCWCATDAEGEGAPLLADAYGRARPVFYLLRPDGYVAARGRPATDANALLRHCETWFSGMRLET >Mature_555_residues MRIDEVLMAVVPLSTPPVLIVGAGPTGLAAALCLARARVPVRIVDKAARPARYSRAIGIQARTLELLEQQRVVDRFVELG HRARLAILYSAGQRIAELDFDPLQTRYPYLLFLDQTVTERLLTEHLATFDVHVERGVTLTHCAQPEGALDVRLRHGDGRD ERLQPSYVVAADGARSTVRHLLDVDFVGHAFEQTFMLADLELGADWPDDEIHLFTTGEGLAGLFPMGGGRYRLVADRPPR NGALDDEREPSLELCREVVRARVTPDLKVGDLAWSSYFHLHSRMVARLRVGRVFFAGDAAHVHSPAGAQGMNTGIQEAFN LGWKLARVLAGNAPERLLETYHAERHPIERDVLRQTSFATQVVEADRGPLKLLRDHIVPILASFGPLRDAARRTVSELAI QYRKSPLTLERVLDGGPRAGERAPDALVHVLDGPLGKAPGVARLFDLHDPAHFTLLVLEPREAIDDTLPSDPGEDGRALA GALERIMPGAVRCWCATDAEGEGAPLLADAYGRARPVFYLLRPDGYVAARGRPATDANALLRHCETWFSGMRLET
Specific function: Dechlorination of pentachlorophenol to tetrachlorohydroquinone. Removes also hydrogen and nitro, amino, and cyano groups from benzene ring at the para position in relation to the hydroxyl of phenol [H]
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pheA/tfdB FAD monooxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786543, Length=542, Percent_Identity=25.2767527675277, Blast_Score=115, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: =1.14.13.50 [H]
Molecular weight: Translated: 61074; Mature: 61074
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIDEVLMAVVPLSTPPVLIVGAGPTGLAAALCLARARVPVRIVDKAARPARYSRAIGIQ CCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEHHHCCCCHHHHHHHCCH ARTLELLEQQRVVDRFVELGHRARLAILYSAGQRIAELDFDPLQTRYPYLLFLDQTVTER HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCCCCCCCEEEEECHHHHHH LLTEHLATFDVHVERGVTLTHCAQPEGALDVRLRHGDGRDERLQPSYVVAADGARSTVRH HHHHHHHHHEEECCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEECCHHHHHHH LLDVDFVGHAFEQTFMLADLELGADWPDDEIHLFTTGEGLAGLFPMGGGRYRLVADRPPR HHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCEEEEEECCCCC NGALDDEREPSLELCREVVRARVTPDLKVGDLAWSSYFHLHSRMVARLRVGRVFFAGDAA CCCCCCCCCCHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHCEEEEECCHH HVHSPAGAQGMNTGIQEAFNLGWKLARVLAGNAPERLLETYHAERHPIERDVLRQTSFAT HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH QVVEADRGPLKLLRDHIVPILASFGPLRDAARRTVSELAIQYRKSPLTLERVLDGGPRAG HHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC ERAPDALVHVLDGPLGKAPGVARLFDLHDPAHFTLLVLEPREAIDDTLPSDPGEDGRALA CCCHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEECCHHHHHHCCCCCCCCCHHHHH GALERIMPGAVRCWCATDAEGEGAPLLADAYGRARPVFYLLRPDGYVAARGRPATDANAL HHHHHHCCCCEEEEEECCCCCCCCCEEECCCCCCCCEEEEECCCCEEEECCCCCCCHHHH LRHCETWFSGMRLET HHHHHHHHCCCCCCC >Mature Secondary Structure MRIDEVLMAVVPLSTPPVLIVGAGPTGLAAALCLARARVPVRIVDKAARPARYSRAIGIQ CCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEHHHCCCCHHHHHHHCCH ARTLELLEQQRVVDRFVELGHRARLAILYSAGQRIAELDFDPLQTRYPYLLFLDQTVTER HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCCCCCCCEEEEECHHHHHH LLTEHLATFDVHVERGVTLTHCAQPEGALDVRLRHGDGRDERLQPSYVVAADGARSTVRH HHHHHHHHHEEECCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEECCHHHHHHH LLDVDFVGHAFEQTFMLADLELGADWPDDEIHLFTTGEGLAGLFPMGGGRYRLVADRPPR HHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCEEEEEECCCCC NGALDDEREPSLELCREVVRARVTPDLKVGDLAWSSYFHLHSRMVARLRVGRVFFAGDAA CCCCCCCCCCHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHCEEEEECCHH HVHSPAGAQGMNTGIQEAFNLGWKLARVLAGNAPERLLETYHAERHPIERDVLRQTSFAT HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH QVVEADRGPLKLLRDHIVPILASFGPLRDAARRTVSELAIQYRKSPLTLERVLDGGPRAG HHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC ERAPDALVHVLDGPLGKAPGVARLFDLHDPAHFTLLVLEPREAIDDTLPSDPGEDGRALA CCCHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEECCHHHHHHCCCCCCCCCHHHHH GALERIMPGAVRCWCATDAEGEGAPLLADAYGRARPVFYLLRPDGYVAARGRPATDANAL HHHHHHCCCCEEEEEECCCCCCCCCEEECCCCCCCCEEEEECCCCEEEECCCCCCCHHHH LRHCETWFSGMRLET HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7678243; 12169590 [H]