| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is yvgK [H]
Identifier: 53720137
GI number: 53720137
Start: 3043818
End: 3044924
Strand: Reverse
Name: yvgK [H]
Synonym: BPSL2527
Alternate gene names: 53720137
Gene position: 3044924-3043818 (Counterclockwise)
Preceding gene: 53720142
Following gene: 53720136
Centisome position: 74.73
GC content: 72.18
Gene sequence:
>1107_bases ATGATTCGAGTCGAATGCGACGCGCATTTGATCGTGCGCGACACCGACGGCCGCACGGCGAGCCTGACCGACGTGGCGCC GCTTCTCGAGCTCGTCGCGACGACGGGCAGCATCGCGCAGGCGGCGCACGCGAAGGGGCTGTCGTACCGGCACGCATGGG GGCTGTTGCGTGCGCTCGAGGCGTGCGTCGGCGGCGCGCTGATCGAGACGGTGCGCGGCAAGGGTTCGACGCTGTCCGAG CTCGGGCAGGCGATCGTCGATGCGCAGCGCCTCGCCGGCGAGCGTCTCGACGGCAATCTGCGCGCGCTCGCGGCGGAGGT CGCGAGCGGGCTCAACCGGCGGCTCGCGCTTCACGCGGGCGCGCTGCGGATCCACGCGTCGCACGGTTACGCGGTCGCGG CGCTCGTGTCCGCGCTCGTCGAGGCCGGCTCGCCCGTCGACATCAAGTATCGCGAGAGCGTCGAGGCGGTGCGCGCGCTC GCGGGCGGCGAATGCGATCTGGCGGGCTTTCATCTGCCGCGCGGCGCGTTTCGCGCAGCCTGCGCGCAGATCTACCGGCC ATGGCTCGACGATGTCGATCACGTGCTGATTCACCTGACGCGTCGCCGGCAAGGCCTGTTCGTGCCGCGCGGCAACCCGA AGCGGATCGCGGGGCTCGCCGATCTCGCGCGCGGCGACATCCGCTTCGTCAACCGGCAGCCGGGCTCCGGCACGCGGATG CTGCTCGATCTCGCGCTGCGCGAGATCGGCATCGATCCGGAGCGAATCGACGGCTACGCGTCGGCGGAGCTCACGCATTC GGCGATCGCCGCGTTCGTCGCGAGCGGGATGGCCGATCTCGGCTTCGGCGTCGAGCCGGCGGCGCGCCACTTCGGGCTCG ACTTCATTGCGGTCGTCGACGAAGACTATTACTTCGCGTGCGAGCGCTCGCGGCTCGGCGCTGTGCCGCTCGCGGGCGCG CTCGCCTTGCTGCGCGACGGCGGCTACCACGCCACGGTGGCGCGGCTCGACGGCTATGATCCGAACGCGTGCGGCACGCT CGTCGACGTCGCGGCGGGCCTTGCGGGCACGGCCGGCGACGCGCGCGCCGGCCGTCATCGGCGGTAA
Upstream 100 bases:
>100_bases CTTATGATTCATATAGAGCGCAAACGGACCTTGAGATATTGATGTGTGTCAACGATAAATCGATAGAATGATGGTCGCAA TAGGAAACGGAATTGCATAA
Downstream 100 bases:
>100_bases CGAAACGGGCGGGCGCACGGCGCTGCAAGGCGCGCGCATTTGCGTTACGCTTGCCGCTTCCTTTCGTGTGAAGCCCACGC GCCGACAGGCGTTCGACATC
Product: regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MIRVECDAHLIVRDTDGRTASLTDVAPLLELVATTGSIAQAAHAKGLSYRHAWGLLRALEACVGGALIETVRGKGSTLSE LGQAIVDAQRLAGERLDGNLRALAAEVASGLNRRLALHAGALRIHASHGYAVAALVSALVEAGSPVDIKYRESVEAVRAL AGGECDLAGFHLPRGAFRAACAQIYRPWLDDVDHVLIHLTRRRQGLFVPRGNPKRIAGLADLARGDIRFVNRQPGSGTRM LLDLALREIGIDPERIDGYASAELTHSAIAAFVASGMADLGFGVEPAARHFGLDFIAVVDEDYYFACERSRLGAVPLAGA LALLRDGGYHATVARLDGYDPNACGTLVDVAAGLAGTAGDARAGRHRR
Sequences:
>Translated_368_residues MIRVECDAHLIVRDTDGRTASLTDVAPLLELVATTGSIAQAAHAKGLSYRHAWGLLRALEACVGGALIETVRGKGSTLSE LGQAIVDAQRLAGERLDGNLRALAAEVASGLNRRLALHAGALRIHASHGYAVAALVSALVEAGSPVDIKYRESVEAVRAL AGGECDLAGFHLPRGAFRAACAQIYRPWLDDVDHVLIHLTRRRQGLFVPRGNPKRIAGLADLARGDIRFVNRQPGSGTRM LLDLALREIGIDPERIDGYASAELTHSAIAAFVASGMADLGFGVEPAARHFGLDFIAVVDEDYYFACERSRLGAVPLAGA LALLRDGGYHATVARLDGYDPNACGTLVDVAAGLAGTAGDARAGRHRR >Mature_368_residues MIRVECDAHLIVRDTDGRTASLTDVAPLLELVATTGSIAQAAHAKGLSYRHAWGLLRALEACVGGALIETVRGKGSTLSE LGQAIVDAQRLAGERLDGNLRALAAEVASGLNRRLALHAGALRIHASHGYAVAALVSALVEAGSPVDIKYRESVEAVRAL AGGECDLAGFHLPRGAFRAACAQIYRPWLDDVDHVLIHLTRRRQGLFVPRGNPKRIAGLADLARGDIRFVNRQPGSGTRM LLDLALREIGIDPERIDGYASAELTHSAIAAFVASGMADLGFGVEPAARHFGLDFIAVVDEDYYFACERSRLGAVPLAGA LALLRDGGYHATVARLDGYDPNACGTLVDVAAGLAGTAGDARAGRHRR
Specific function: Unknown
COG id: COG1910
COG function: function code P; Periplasmic molybdate-binding protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009061 - InterPro: IPR010093 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38853; Mature: 38853
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRVECDAHLIVRDTDGRTASLTDVAPLLELVATTGSIAQAAHAKGLSYRHAWGLLRALE CEEEEECCEEEEECCCCCEECHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHH ACVGGALIETVRGKGSTLSELGQAIVDAQRLAGERLDGNLRALAAEVASGLNRRLALHAG HHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHEEEEC ALRIHASHGYAVAALVSALVEAGSPVDIKYRESVEAVRALAGGECDLAGFHLPRGAFRAA EEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH CAQIYRPWLDDVDHVLIHLTRRRQGLFVPRGNPKRIAGLADLARGDIRFVNRQPGSGTRM HHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHH LLDLALREIGIDPERIDGYASAELTHSAIAAFVASGMADLGFGVEPAARHFGLDFIAVVD HHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHCCCEEEEEEC EDYYFACERSRLGAVPLAGALALLRDGGYHATVARLDGYDPNACGTLVDVAAGLAGTAGD CCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCC ARAGRHRR CCCCCCCC >Mature Secondary Structure MIRVECDAHLIVRDTDGRTASLTDVAPLLELVATTGSIAQAAHAKGLSYRHAWGLLRALE CEEEEECCEEEEECCCCCEECHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHH ACVGGALIETVRGKGSTLSELGQAIVDAQRLAGERLDGNLRALAAEVASGLNRRLALHAG HHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHEEEEC ALRIHASHGYAVAALVSALVEAGSPVDIKYRESVEAVRALAGGECDLAGFHLPRGAFRAA EEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH CAQIYRPWLDDVDHVLIHLTRRRQGLFVPRGNPKRIAGLADLARGDIRFVNRQPGSGTRM HHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHH LLDLALREIGIDPERIDGYASAELTHSAIAAFVASGMADLGFGVEPAARHFGLDFIAVVD HHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHCCCEEEEEEC EDYYFACERSRLGAVPLAGALALLRDGGYHATVARLDGYDPNACGTLVDVAAGLAGTAGD CCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCC ARAGRHRR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]