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The map label for this gene is etfB [H]

Identifier: 53720109

GI number: 53720109

Start: 3013528

End: 3014277

Strand: Reverse

Name: etfB [H]

Synonym: BPSL2500

Alternate gene names: 53720109

Gene position: 3014277-3013528 (Counterclockwise)

Preceding gene: 53720110

Following gene: 53720108

Centisome position: 73.98

GC content: 64.93

Gene sequence:

>750_bases
ATGAAAATCCTGGTGCCAGTGAAAAGAGTGGTCGATTACAACGTGAAGGTCCGCGTGAAGTCGGATGGCACGGGCGTCGA
TATCGCGAACGTGAAGATGTCGATGAACCCGTTCGACGAGATCGCCGTTGAAGAAGCGGTGCGCCTGAAGGAAGCGGGCG
TGGCGACCGAGGTGATCGCGGTGTCGGTCGGCGTCGCGCAGGCCCAGGAAACGCTGCGCACGGCGCTCGCGATCGGCGCG
GACCGCGCGATTCTCGTCGAATCGAACGACGAGGTGCAGCCGCTTTCCGTCGCGAAGATCCTGAAGGCGCTGGTCGACAA
GGAACAGCCGCAGCTCGTGATCCTCGGCAAGCAGGCGATCGACGACGACTCGAATCAGACGGGCCAGATGCTCGCCGCGC
TCGCGAACCTGCCGCAGGCGACGTTCGCGTCGAAGGTGACGGTGGCGGACGGCAAGGCGACCGTCGCGCGGGAAGTGGAC
GGCGGCGCGGAGACGTTGTCGCTGACGTTGCCGGCCGTGGTGACGACGGACCTGCGCCTGAACGAGCCGCGCTACGTGAC
GCTGCCGAACATCATGAAGGCGAAGAAGAAGCCGTTGGAGACGGTGAAGCCGGAAGACCTCGGCGTGGATGTCGCGCCGC
GCCTGAAGACGCTGAAGGTGGTGGAGCCGCCCAAGCGCGCGGCGGGCGTGAAGGTCGCGGACGTGAAGACGCTGGTCGAG
AAGCTGAAGACCGAAGCCAAGGTGCTGTAA

Upstream 100 bases:

>100_bases
CTCGGTGCAGCCGCAAATTGAATGACCGGCGTCGCCGCCGCGTGGGCGAGCCACGCTATAAAATGGCCGCTGGTCGTATT
CGTAACTTTGGAGCGTGTGC

Downstream 100 bases:

>100_bases
GGGGAGCGCAAGGAAATGACGATTCTGGTGATTGCGGAACACGACAACGCGTCGATCAAGGCGGCCACGCTGAACACGGT
GGCGGCGGCGACGAAGATCG

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKILVPVKRVVDYNVKVRVKSDGTGVDIANVKMSMNPFDEIAVEEAVRLKEAGVATEVIAVSVGVAQAQETLRTALAIGA
DRAILVESNDEVQPLSVAKILKALVDKEQPQLVILGKQAIDDDSNQTGQMLAALANLPQATFASKVTVADGKATVAREVD
GGAETLSLTLPAVVTTDLRLNEPRYVTLPNIMKAKKKPLETVKPEDLGVDVAPRLKTLKVVEPPKRAAGVKVADVKTLVE
KLKTEAKVL

Sequences:

>Translated_249_residues
MKILVPVKRVVDYNVKVRVKSDGTGVDIANVKMSMNPFDEIAVEEAVRLKEAGVATEVIAVSVGVAQAQETLRTALAIGA
DRAILVESNDEVQPLSVAKILKALVDKEQPQLVILGKQAIDDDSNQTGQMLAALANLPQATFASKVTVADGKATVAREVD
GGAETLSLTLPAVVTTDLRLNEPRYVTLPNIMKAKKKPLETVKPEDLGVDVAPRLKTLKVVEPPKRAAGVKVADVKTLVE
KLKTEAKVL
>Mature_249_residues
MKILVPVKRVVDYNVKVRVKSDGTGVDIANVKMSMNPFDEIAVEEAVRLKEAGVATEVIAVSVGVAQAQETLRTALAIGA
DRAILVESNDEVQPLSVAKILKALVDKEQPQLVILGKQAIDDDSNQTGQMLAALANLPQATFASKVTVADGKATVAREVD
GGAETLSLTLPAVVTTDLRLNEPRYVTLPNIMKAKKKPLETVKPEDLGVDVAPRLKTLKVVEPPKRAAGVKVADVKTLVE
KLKTEAKVL

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=247, Percent_Identity=62.3481781376518, Blast_Score=291, Evalue=5e-79,
Organism=Homo sapiens, GI62420877, Length=237, Percent_Identity=60.7594936708861, Blast_Score=269, Evalue=1e-72,
Organism=Escherichia coli, GI87081682, Length=231, Percent_Identity=27.7056277056277, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=56.1264822134387, Blast_Score=258, Evalue=2e-69,
Organism=Saccharomyces cerevisiae, GI6321646, Length=253, Percent_Identity=50.9881422924901, Blast_Score=241, Evalue=6e-65,
Organism=Drosophila melanogaster, GI24651147, Length=246, Percent_Identity=60.5691056910569, Blast_Score=265, Evalue=2e-71,
Organism=Drosophila melanogaster, GI24651145, Length=246, Percent_Identity=60.5691056910569, Blast_Score=265, Evalue=2e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26570; Mature: 26570

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVPVKRVVDYNVKVRVKSDGTGVDIANVKMSMNPFDEIAVEEAVRLKEAGVATEVIA
CEEEEECHHHHCCCEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHH
VSVGVAQAQETLRTALAIGADRAILVESNDEVQPLSVAKILKALVDKEQPQLVILGKQAI
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHC
DDDSNQTGQMLAALANLPQATFASKVTVADGKATVAREVDGGAETLSLTLPAVVTTDLRL
CCCCCHHHHHHHHHHCCCCHHHHCEEEEECCCEEEEEECCCCCEEEEEEECEEEEECEEE
NEPRYVTLPNIMKAKKKPLETVKPEDLGVDVAPRLKTLKVVEPPKRAAGVKVADVKTLVE
CCCCEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCHHHHHHHHH
KLKTEAKVL
HHHHHHCCC
>Mature Secondary Structure
MKILVPVKRVVDYNVKVRVKSDGTGVDIANVKMSMNPFDEIAVEEAVRLKEAGVATEVIA
CEEEEECHHHHCCCEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHH
VSVGVAQAQETLRTALAIGADRAILVESNDEVQPLSVAKILKALVDKEQPQLVILGKQAI
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHC
DDDSNQTGQMLAALANLPQATFASKVTVADGKATVAREVDGGAETLSLTLPAVVTTDLRL
CCCCCHHHHHHHHHHCCCCHHHHCEEEEECCCEEEEEECCCCCEEEEEEECEEEEECEEE
NEPRYVTLPNIMKAKKKPLETVKPEDLGVDVAPRLKTLKVVEPPKRAAGVKVADVKTLVE
CCCCEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCHHHHHHHHH
KLKTEAKVL
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]