Click here to switch to the map view.

The map label for this gene is vdlD [H]

Identifier: 53720076

GI number: 53720076

Start: 2977573

End: 2978079

Strand: Reverse

Name: vdlD [H]

Synonym: BPSL2470

Alternate gene names: 53720076

Gene position: 2978079-2977573 (Counterclockwise)

Preceding gene: 53720077

Following gene: 53720072

Centisome position: 73.09

GC content: 66.67

Gene sequence:

>507_bases
ATGCCCGCCACGCCCCCCGCGCCGCTTGACCGTACCGAAACCGTTTTCCGCTTCCTCGCCGAGCCGACGTCCGTCAACTT
CGGCGGCAAGGTGCACGGCGGCGCGCTGATGAAATGGATCGACGAAACCGCGTATGCCTGTGCGGCGATCTGGTCGAGCC
GCTATTGCGTGACGGTGAGCGTCGGCAACATCCGTTTCCAGCGGCCGATTCTCGTCGGCAATCTCGTCGAGCTGAAGGCG
CGCGTCGTCGCGACGGGCCGCACGAGCATGCACATCCACGTGTCGGTGCACGCGGGCGACCCGAAGGGCGGCGTGCTGCG
CCAGACGACCGATTGCCTCGTCGTGTTCGTCGCGGTCGACGAGAACGGCAATCCGGTGCCGGTGCCGCCGTTCGTGCCCG
TCAACGACGAGCAGAAGCGGCTCGCGCAGTACGCGATGGACGTGCGTGCGGCGCTCGACAAGATCGTCGAGCTCAAGCCG
GAGGAAGTCGCGAAAGGGGAAGTGTGA

Upstream 100 bases:

>100_bases
CGCGAGCGGCAGCCCCGAATAGCGCCTGCGGCGCCATGTCGCAGCGCAACGTATAATCGTCTCCTTTCCCGCCACACCAG
CAGAACTGGAGCCAGCCGAG

Downstream 100 bases:

>100_bases
GCGTGCGCCGGCGTGCGCGGCGGGCATCCGCCCGCGCGCATGCCGGATGCCGAGTGCGCCGCATCGAGCCGAGTGAAACG
CCGCGAACGATCGCGGCGTT

Product: long-chain acyl-CoA thioester hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MPATPPAPLDRTETVFRFLAEPTSVNFGGKVHGGALMKWIDETAYACAAIWSSRYCVTVSVGNIRFQRPILVGNLVELKA
RVVATGRTSMHIHVSVHAGDPKGGVLRQTTDCLVVFVAVDENGNPVPVPPFVPVNDEQKRLAQYAMDVRAALDKIVELKP
EEVAKGEV

Sequences:

>Translated_168_residues
MPATPPAPLDRTETVFRFLAEPTSVNFGGKVHGGALMKWIDETAYACAAIWSSRYCVTVSVGNIRFQRPILVGNLVELKA
RVVATGRTSMHIHVSVHAGDPKGGVLRQTTDCLVVFVAVDENGNPVPVPPFVPVNDEQKRLAQYAMDVRAALDKIVELKP
EEVAKGEV
>Mature_167_residues
PATPPAPLDRTETVFRFLAEPTSVNFGGKVHGGALMKWIDETAYACAAIWSSRYCVTVSVGNIRFQRPILVGNLVELKAR
VVATGRTSMHIHVSVHAGDPKGGVLRQTTDCLVVFVAVDENGNPVPVPPFVPVNDEQKRLAQYAMDVRAALDKIVELKPE
EVAKGEV

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 18233; Mature: 18102

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPATPPAPLDRTETVFRFLAEPTSVNFGGKVHGGALMKWIDETAYACAAIWSSRYCVTVS
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCEEEEE
VGNIRFQRPILVGNLVELKARVVATGRTSMHIHVSVHAGDPKGGVLRQTTDCLVVFVAVD
ECCEEEECCEEECHHHHHEEEEEEECCCEEEEEEEEECCCCCCCEEEECCCEEEEEEEEC
ENGNPVPVPPFVPVNDEQKRLAQYAMDVRAALDKIVELKPEEVAKGEV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure 
PATPPAPLDRTETVFRFLAEPTSVNFGGKVHGGALMKWIDETAYACAAIWSSRYCVTVS
CCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCEEEEE
VGNIRFQRPILVGNLVELKARVVATGRTSMHIHVSVHAGDPKGGVLRQTTDCLVVFVAVD
ECCEEEECCEEECHHHHHEEEEEEECCCEEEEEEEEECCCCCCCEEEECCCEEEEEEEEC
ENGNPVPVPPFVPVNDEQKRLAQYAMDVRAALDKIVELKPEEVAKGEV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]