| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720013
Identifier: 53720013
GI number: 53720013
Start: 2908884
End: 2909855
Strand: Reverse
Name: 53720013
Synonym: BPSL2407
Alternate gene names: NA
Gene position: 2909855-2908884 (Counterclockwise)
Preceding gene: 53720014
Following gene: 53720012
Centisome position: 71.42
GC content: 75.0
Gene sequence:
>972_bases TTGGCGAGAACGAAACCCACGCGCGCGAACCCGGCCCCCGGCTCGGGCGTCATTTTCGCGTTGCGAGCCATCGGTCTCGT GCTGCTCGCCCGCTGGCTCTTCTCGATGTCGCTGATGGGCTATCGCGCGTCGCTCTCGGCGATGGCGTCGTCGCCGTGGG CGTGCATCAACGTCGTCCTCATCTTCCTGTTGCTCGTGCTGCCCGGCGCGCAGGCGCGCGCCGAGCGCCCGCTGCATCCG CTGCCGCAGTGGCTGCGCCAGGCGCTGCGCTTTTTCGCGCTGCTCGGCTTTCTGTTCGCCGCATGGTCGGTCGGCGTGTT CGCGTGGGCGGCCGGCTGGCGCCGCGCGCTGCACGCGCTCACGGTCAGCAACGGCTGGCTGCTCGCCGCGCCCGCGCTCT ATGCGGCCGTCGTCTGGGTGTGCCGGCCGCGCGCGCTGTGGCGCACCAATGTCGCCGCGCGCCGCTACGCGATCGGCCGC TACGCCGTCTCGCTCGACATGCTGACGCGCACCGTCGTCGTCTGGATGGAGAGCCGCAAGGTAGGGCAATACGATGCGCG CGAGCTGTCCGTGCGCTGGCCGAAGGGGGCCGAGCCGCGAGCGGCGAGCGTCGAGGCCGACGCGCCGGCGGCGGACGCGG CGGGCGGCGCGACGGCATCCGCCGCTACGTCGGACGTCGCAGCGGCGGATGCCGCCGCGCGGCCGGCGTGCGCCGCGCCG CCTGCGCAGCCGGATGCCGACGCGTCCGCCGCCGCGCCTGCCGCCGCGCGCGCTTCGGCGAAACGGCCGGCGGTCGCGCG CCCCGCGCCGCGCGCCGGCGGCTGGTTTGCCCGGCCGAAGATCGAGCTGCTGTGGGATTCGCCGGCCGCGGTCGGCCACA ACCGCCAGATCGTGATGCGCGCGCCGCTCGCGACGGAAGGGGACCGCGTCGCGGCGCGCGCGCTCGACGCGTCGCTCAAG CAGATCGCATGA
Upstream 100 bases:
>100_bases GCCGATTTGCGGCGCTGGGGCATCAGCCGGCCGAGTAATGTCCCTATAATGGCCGTGCCGTAAAATCGGGCCCCGGCAAG GCCGTCAAGAGGAGAGAGTT
Downstream 100 bases:
>100_bases CGCCGGCGGGCCGGCCCGCGCCGCCGCGTTCGCTTCGCCGACACAAGGAGGAACGATGCTGACCGTCCGATGGCTGCTCG CCGCCGTTCATTTGCTCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MARTKPTRANPAPGSGVIFALRAIGLVLLARWLFSMSLMGYRASLSAMASSPWACINVVLIFLLLVLPGAQARAERPLHP LPQWLRQALRFFALLGFLFAAWSVGVFAWAAGWRRALHALTVSNGWLLAAPALYAAVVWVCRPRALWRTNVAARRYAIGR YAVSLDMLTRTVVVWMESRKVGQYDARELSVRWPKGAEPRAASVEADAPAADAAGGATASAATSDVAAADAAARPACAAP PAQPDADASAAAPAAARASAKRPAVARPAPRAGGWFARPKIELLWDSPAAVGHNRQIVMRAPLATEGDRVAARALDASLK QIA
Sequences:
>Translated_323_residues MARTKPTRANPAPGSGVIFALRAIGLVLLARWLFSMSLMGYRASLSAMASSPWACINVVLIFLLLVLPGAQARAERPLHP LPQWLRQALRFFALLGFLFAAWSVGVFAWAAGWRRALHALTVSNGWLLAAPALYAAVVWVCRPRALWRTNVAARRYAIGR YAVSLDMLTRTVVVWMESRKVGQYDARELSVRWPKGAEPRAASVEADAPAADAAGGATASAATSDVAAADAAARPACAAP PAQPDADASAAAPAAARASAKRPAVARPAPRAGGWFARPKIELLWDSPAAVGHNRQIVMRAPLATEGDRVAARALDASLK QIA >Mature_322_residues ARTKPTRANPAPGSGVIFALRAIGLVLLARWLFSMSLMGYRASLSAMASSPWACINVVLIFLLLVLPGAQARAERPLHPL PQWLRQALRFFALLGFLFAAWSVGVFAWAAGWRRALHALTVSNGWLLAAPALYAAVVWVCRPRALWRTNVAARRYAIGRY AVSLDMLTRTVVVWMESRKVGQYDARELSVRWPKGAEPRAASVEADAPAADAAGGATASAATSDVAAADAAARPACAAPP AQPDADASAAAPAAARASAKRPAVARPAPRAGGWFARPKIELLWDSPAAVGHNRQIVMRAPLATEGDRVAARALDASLKQ IA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34250; Mature: 34119
Theoretical pI: Translated: 11.83; Mature: 11.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTKPTRANPAPGSGVIFALRAIGLVLLARWLFSMSLMGYRASLSAMASSPWACINVVL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH IFLLLVLPGAQARAERPLHPLPQWLRQALRFFALLGFLFAAWSVGVFAWAAGWRRALHAL HHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVSNGWLLAAPALYAAVVWVCRPRALWRTNVAARRYAIGRYAVSLDMLTRTVVVWMESRK HCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VGQYDARELSVRWPKGAEPRAASVEADAPAADAAGGATASAATSDVAAADAAARPACAAP CCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC PAQPDADASAAAPAAARASAKRPAVARPAPRAGGWFARPKIELLWDSPAAVGHNRQIVMR CCCCCCCCHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEE APLATEGDRVAARALDASLKQIA CCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure ARTKPTRANPAPGSGVIFALRAIGLVLLARWLFSMSLMGYRASLSAMASSPWACINVVL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH IFLLLVLPGAQARAERPLHPLPQWLRQALRFFALLGFLFAAWSVGVFAWAAGWRRALHAL HHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVSNGWLLAAPALYAAVVWVCRPRALWRTNVAARRYAIGRYAVSLDMLTRTVVVWMESRK HCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VGQYDARELSVRWPKGAEPRAASVEADAPAADAAGGATASAATSDVAAADAAARPACAAP CCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC PAQPDADASAAAPAAARASAKRPAVARPAPRAGGWFARPKIELLWDSPAAVGHNRQIVMR CCCCCCCCHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEE APLATEGDRVAARALDASLKQIA CCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA