| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is 53720002
Identifier: 53720002
GI number: 53720002
Start: 2892943
End: 2893989
Strand: Reverse
Name: 53720002
Synonym: BPSL2396
Alternate gene names: NA
Gene position: 2893989-2892943 (Counterclockwise)
Preceding gene: 53720003
Following gene: 53720001
Centisome position: 71.03
GC content: 71.63
Gene sequence:
>1047_bases ATGACCCGCTGGATCAAATGGCTCGGCTGGCCGATCGGCATCGCGATCCTGCTCGCGCTCGTCGTGCACGAGGGCGCCGG CGACGCTGTCCGCGTGATCGGCCAGGCCGGCTTCGCGCTGCTGTGGCTCGTGCCGTTTCACGGGCTGCCGCTGCTGCTCG ACGCGCATGCGTGGCGTCTGCTGCTCGACAAGCGCGCGTCGCTGCCGTTCCTCTGGTGGATCGCGACGGTGCGCGAGGCG GTGAACCGGCTGCTGCCCGTCGTCGGCGTCGGCGGCGAGATCGTCGGCATTCGGCTCGCGCGCTGGCGCGTGCCCGATGC GAGCCGCGTGACGGCGTCGGTGATCGTCGAGGTGCTCGTGACGATTGCCGTTCAGTACGCGTTCGCCGCGCTCGGCCTCG TGCTGCTGCTCGCCGCGACGCAGGAGAGCGTCGGCGCGAAGACGATCGGCGTCGCGCTCGCCTTGTCGCTGCCGATTCCC GTGCTCGGCTTCGTGCTGATGCGCCGCGGCGGGGTTTTCCATGCGATCGAGCGCTTCGCGGGCCGGCTGCTCGGCGATTC GCACCGGCTGTTGCAGGGCGTCGACGGCAAGCGTCTCGACGCCGACATCGATGCGCTGATGTCGCGCGCCGGCCTGTTGT TCCGCGCGTTCTTCTGGCAGCTCGCGGGTTACGTCGCGGGCGCGCTGGAAATCTATTGGGCGCTCGCGCTGCTCGGCCAT CCGATATCGATTGGCGGCGCGATCGCGATCGAGGCGATGACGCAGGCGGTGCGCCATGCGGCGTTCATGGTGCCGGGCGG CCTCGGCGTTCAGGAGGCGACCGTCGTGCTGCTCGCGCAGATGTTCGGCGTCGACCGCGAGGCGGCGCTGTCGCTCGCGC TCGTCAAGCGCGCGCGCGAGTTGCTGTTCGGCGCGCTCGCGCTCGGATCGTGGCAGGTCGTCGAGCTGTCGCGCACGCGG CGGCGGATTCGCAGCCACGCGAGGCGAGCGGCCCGCGTCGCGGCGGCCGAGGCGCGGCGCGAGCGCGAGACGGAGCCGTC GCTGTGA
Upstream 100 bases:
>100_bases AGGCGGCGGGCGTCGCGTGCGGCGGCTTCGCCGACGTGTTCGGCGGCGGCGCGCGTGCGCGGATGCCGCGCGGCGCGCGG ATCAGCGGAGCGCCGCCGTC
Downstream 100 bases:
>100_bases ACGCGCGGCGGGGCCGCCGGGCGCCTGCTTTCGGGCATTGATTCGGCGGAGTGGTCGAATCGAGCTCGAAGCTCGAAGCT CGAAGCTCGAAGCTCGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MTRWIKWLGWPIGIAILLALVVHEGAGDAVRVIGQAGFALLWLVPFHGLPLLLDAHAWRLLLDKRASLPFLWWIATVREA VNRLLPVVGVGGEIVGIRLARWRVPDASRVTASVIVEVLVTIAVQYAFAALGLVLLLAATQESVGAKTIGVALALSLPIP VLGFVLMRRGGVFHAIERFAGRLLGDSHRLLQGVDGKRLDADIDALMSRAGLLFRAFFWQLAGYVAGALEIYWALALLGH PISIGGAIAIEAMTQAVRHAAFMVPGGLGVQEATVVLLAQMFGVDREAALSLALVKRARELLFGALALGSWQVVELSRTR RRIRSHARRAARVAAAEARRERETEPSL
Sequences:
>Translated_348_residues MTRWIKWLGWPIGIAILLALVVHEGAGDAVRVIGQAGFALLWLVPFHGLPLLLDAHAWRLLLDKRASLPFLWWIATVREA VNRLLPVVGVGGEIVGIRLARWRVPDASRVTASVIVEVLVTIAVQYAFAALGLVLLLAATQESVGAKTIGVALALSLPIP VLGFVLMRRGGVFHAIERFAGRLLGDSHRLLQGVDGKRLDADIDALMSRAGLLFRAFFWQLAGYVAGALEIYWALALLGH PISIGGAIAIEAMTQAVRHAAFMVPGGLGVQEATVVLLAQMFGVDREAALSLALVKRARELLFGALALGSWQVVELSRTR RRIRSHARRAARVAAAEARRERETEPSL >Mature_347_residues TRWIKWLGWPIGIAILLALVVHEGAGDAVRVIGQAGFALLWLVPFHGLPLLLDAHAWRLLLDKRASLPFLWWIATVREAV NRLLPVVGVGGEIVGIRLARWRVPDASRVTASVIVEVLVTIAVQYAFAALGLVLLLAATQESVGAKTIGVALALSLPIPV LGFVLMRRGGVFHAIERFAGRLLGDSHRLLQGVDGKRLDADIDALMSRAGLLFRAFFWQLAGYVAGALEIYWALALLGHP ISIGGAIAIEAMTQAVRHAAFMVPGGLGVQEATVVLLAQMFGVDREAALSLALVKRARELLFGALALGSWQVVELSRTRR RIRSHARRAARVAAAEARRERETEPSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37692; Mature: 37561
Theoretical pI: Translated: 11.61; Mature: 11.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRWIKWLGWPIGIAILLALVVHEGAGDAVRVIGQAGFALLWLVPFHGLPLLLDAHAWRL CCCHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LLDKRASLPFLWWIATVREAVNRLLPVVGVGGEIVGIRLARWRVPDASRVTASVIVEVLV HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHH TIAVQYAFAALGLVLLLAATQESVGAKTIGVALALSLPIPVLGFVLMRRGGVFHAIERFA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHH GRLLGDSHRLLQGVDGKRLDADIDALMSRAGLLFRAFFWQLAGYVAGALEIYWALALLGH HHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PISIGGAIAIEAMTQAVRHAAFMVPGGLGVQEATVVLLAQMFGVDREAALSLALVKRARE CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LLFGALALGSWQVVELSRTRRRIRSHARRAARVAAAEARRERETEPSL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TRWIKWLGWPIGIAILLALVVHEGAGDAVRVIGQAGFALLWLVPFHGLPLLLDAHAWRL CCHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LLDKRASLPFLWWIATVREAVNRLLPVVGVGGEIVGIRLARWRVPDASRVTASVIVEVLV HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHH TIAVQYAFAALGLVLLLAATQESVGAKTIGVALALSLPIPVLGFVLMRRGGVFHAIERFA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHH GRLLGDSHRLLQGVDGKRLDADIDALMSRAGLLFRAFFWQLAGYVAGALEIYWALALLGH HHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PISIGGAIAIEAMTQAVRHAAFMVPGGLGVQEATVVLLAQMFGVDREAALSLALVKRARE CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LLFGALALGSWQVVELSRTRRRIRSHARRAARVAAAEARRERETEPSL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA