| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719966
Identifier: 53719966
GI number: 53719966
Start: 2852734
End: 2853180
Strand: Reverse
Name: 53719966
Synonym: BPSL2359
Alternate gene names: NA
Gene position: 2853180-2852734 (Counterclockwise)
Preceding gene: 53719967
Following gene: 53719958
Centisome position: 70.02
GC content: 68.46
Gene sequence:
>447_bases ATGAACCATGAAACGAAAACGCTGCCGATCGTCTATTCCTGCTCGGGGTGCTCGAATGTCGCGCAGCTCGCGAATCACGT CGCGGTGCGGCTCGATCGCGGCGGCGATGCGGAGATGTCGTGCATCGCGGGCGTGGGCGGCGACGTGCCGTCGCTGCTGA AGATCGCGCATTCGGGGCGGCCGATTCTTGCGATCGACGGCTGCCCGCTCGTATGCGCGAAGAAGAGCCTCGAGCGGCAC GGGATCGCGCCCGATGCGCATCTGCAGCTCGGCGAGCACGGCGTCAGAAAGCGCTTTCACGAGGATTTCGCCCCGGGCGA CGCGAGCCGCATACTCGCGATCGCGAAAGCCGAAGCGGCGCGGCTCGCGGGAAGCCGGCCCGCGCCCGAACCCGAACTCG CGCAGGCGGGCGAGGATGCCGGCGCCGCGCTTGAACGCAAGCGCTGA
Upstream 100 bases:
>100_bases GTGGCTGCCGACGCGGCTGTTCCGACAACGGCCGCTCGAACGCGACGCAATGCCGGACTGAAATACGCGCAAGCGGCGAA CGGGCGATCAGGAGACCGGA
Downstream 100 bases:
>100_bases CTTCCGCCGACTTCCGATATCCGATGCGCGGCGCGCGTGGCCGAGCGGCGGCTGCTCGACCCGATCGGCTACCCGGCGAT CGAGCCCGCGGCCACGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: DGC Domain-Containing Protein; Lipoprotein; DGC Domain Superfamily; Dgc Domain Protein; Lipoprotein COG
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MNHETKTLPIVYSCSGCSNVAQLANHVAVRLDRGGDAEMSCIAGVGGDVPSLLKIAHSGRPILAIDGCPLVCAKKSLERH GIAPDAHLQLGEHGVRKRFHEDFAPGDASRILAIAKAEAARLAGSRPAPEPELAQAGEDAGAALERKR
Sequences:
>Translated_148_residues MNHETKTLPIVYSCSGCSNVAQLANHVAVRLDRGGDAEMSCIAGVGGDVPSLLKIAHSGRPILAIDGCPLVCAKKSLERH GIAPDAHLQLGEHGVRKRFHEDFAPGDASRILAIAKAEAARLAGSRPAPEPELAQAGEDAGAALERKR >Mature_148_residues MNHETKTLPIVYSCSGCSNVAQLANHVAVRLDRGGDAEMSCIAGVGGDVPSLLKIAHSGRPILAIDGCPLVCAKKSLERH GIAPDAHLQLGEHGVRKRFHEDFAPGDASRILAIAKAEAARLAGSRPAPEPELAQAGEDAGAALERKR
Specific function: Unknown
COG id: COG4273
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15472; Mature: 15472
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHETKTLPIVYSCSGCSNVAQLANHVAVRLDRGGDAEMSCIAGVGGDVPSLLKIAHSGR CCCCCCEEEEEEECCCHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCHHHHHHHHHCCC PILAIDGCPLVCAKKSLERHGIAPDAHLQLGEHGVRKRFHEDFAPGDASRILAIAKAEAA CEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RLAGSRPAPEPELAQAGEDAGAALERKR HHCCCCCCCCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure MNHETKTLPIVYSCSGCSNVAQLANHVAVRLDRGGDAEMSCIAGVGGDVPSLLKIAHSGR CCCCCCEEEEEEECCCHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCHHHHHHHHHCCC PILAIDGCPLVCAKKSLERHGIAPDAHLQLGEHGVRKRFHEDFAPGDASRILAIAKAEAA CEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RLAGSRPAPEPELAQAGEDAGAALERKR HHCCCCCCCCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA