| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719956
Identifier: 53719956
GI number: 53719956
Start: 2835569
End: 2836579
Strand: Reverse
Name: 53719956
Synonym: BPSL2346
Alternate gene names: NA
Gene position: 2836579-2835569 (Counterclockwise)
Preceding gene: 53719957
Following gene: 53719955
Centisome position: 69.62
GC content: 71.71
Gene sequence:
>1011_bases ATGCAGGACTCGCAGCCCGACGCCCTTCCGCCCGAGCCTTTCGTCGCGCCGGCCGCCGACGGCTTTCCCGTGCGCGGCTT CGCGTGGCGGCATCGCGCGCCCGCCGCGGGCCGGCCGGTGACGGTCATCAATTGCGCGACGTCCGTGCGCTGCCGCTATT ACTTCCGCTTCGCCGCCTATCTGTTCAGCCAGGGCAGCGACGTGCTCGTCTACGACTATCGCGGCATCGGCGAATCGCGG CCCGCGTCGCTCGCCGGTTTTCATGCGACCTGGCTCGACTGGGGCCGTCTCGATTGCGATGCGGTGCTGCAATACGCGGC GCGCACGTGCGCGGGCCAGCCGGTGGATGTCGTCGCGCACAGCGTCGGCGGCGTGGTGCTCGGGCTCGCGGCGTCGAATC CGATCGTGCGGCGCGCGCTCACGGTCGGCGCGCAATATGCGTACTGGCGCGATTACGCGGGCTCGCATCGGCTGAGGATG CTGGCCAAATGGCATGTCGCGATGCCGATGCTCGCGCGCGTGTTCGGCTACGTTCCGGCCAAGCGGCTCGGCTGGATGGA GGACACGCCGCGCGGCGTCGCGCTGTCGTGGAGCCGCAGCCGGCCGCGCTTCGAGGACGCTTACGTGCGTGCGCCGATCC GCGAGACGCCCGACGCGCGGCGCGATCTCGTCGAACGCTTTACGCGCCTCACCGCGCCGATGCTCGCGATCGGCCTGTCG GACGACGAGTTCGGCAGCGTCGAGGCGGTCGAACGTCTGCTCGGCTATTACACGCGCAGCGCGGTCACCCATCTGCGGAT CGCGCCCGAGCAGATCGGTGTGGCGTCGATCGGGCATTTCGCGTTCTTCCACAGCCGCTTCGAGCAGACGCTCTGGCCGA TCGCGCTCGGCTGGCTGAAGACGGGCGCGCTCGCGCCCGAGACGCCGGGCCGGGTTCACCGGCAGCCGTGCGCGCCCGAG CCCGCGCGCGCGGCACGCGACGAGGCGAGCGGGCGGACGGCCGCCCGCTGA
Upstream 100 bases:
>100_bases CCCGCCGATTCGCAGCCGACCGACAAGAGAAGGGAATCGCGCGGACGCATTGTGCGATCGCGCGGCGCGCCATCTCGACA TAACCATGAGAGGAGACGAT
Downstream 100 bases:
>100_bases GCGGCGCGAGACGCGCGGCGGCCGCCGCCGGCTGCGTTCGGCGCGCGCGAAGATCCGTTACCATCGAACGCTTTCCACCG CCTGCACGACGTGCGTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase-Like Protein; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold Family Protein; Family; Dehydrogenase; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase Alpha/Beta Fold Family
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MQDSQPDALPPEPFVAPAADGFPVRGFAWRHRAPAAGRPVTVINCATSVRCRYYFRFAAYLFSQGSDVLVYDYRGIGESR PASLAGFHATWLDWGRLDCDAVLQYAARTCAGQPVDVVAHSVGGVVLGLAASNPIVRRALTVGAQYAYWRDYAGSHRLRM LAKWHVAMPMLARVFGYVPAKRLGWMEDTPRGVALSWSRSRPRFEDAYVRAPIRETPDARRDLVERFTRLTAPMLAIGLS DDEFGSVEAVERLLGYYTRSAVTHLRIAPEQIGVASIGHFAFFHSRFEQTLWPIALGWLKTGALAPETPGRVHRQPCAPE PARAARDEASGRTAAR
Sequences:
>Translated_336_residues MQDSQPDALPPEPFVAPAADGFPVRGFAWRHRAPAAGRPVTVINCATSVRCRYYFRFAAYLFSQGSDVLVYDYRGIGESR PASLAGFHATWLDWGRLDCDAVLQYAARTCAGQPVDVVAHSVGGVVLGLAASNPIVRRALTVGAQYAYWRDYAGSHRLRM LAKWHVAMPMLARVFGYVPAKRLGWMEDTPRGVALSWSRSRPRFEDAYVRAPIRETPDARRDLVERFTRLTAPMLAIGLS DDEFGSVEAVERLLGYYTRSAVTHLRIAPEQIGVASIGHFAFFHSRFEQTLWPIALGWLKTGALAPETPGRVHRQPCAPE PARAARDEASGRTAAR >Mature_336_residues MQDSQPDALPPEPFVAPAADGFPVRGFAWRHRAPAAGRPVTVINCATSVRCRYYFRFAAYLFSQGSDVLVYDYRGIGESR PASLAGFHATWLDWGRLDCDAVLQYAARTCAGQPVDVVAHSVGGVVLGLAASNPIVRRALTVGAQYAYWRDYAGSHRLRM LAKWHVAMPMLARVFGYVPAKRLGWMEDTPRGVALSWSRSRPRFEDAYVRAPIRETPDARRDLVERFTRLTAPMLAIGLS DDEFGSVEAVERLLGYYTRSAVTHLRIAPEQIGVASIGHFAFFHSRFEQTLWPIALGWLKTGALAPETPGRVHRQPCAPE PARAARDEASGRTAAR
Specific function: Unknown
COG id: COG4757
COG function: function code R; Predicted alpha/beta hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37212; Mature: 37212
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDSQPDALPPEPFVAPAADGFPVRGFAWRHRAPAAGRPVTVINCATSVRCRYYFRFAAY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH LFSQGSDVLVYDYRGIGESRPASLAGFHATWLDWGRLDCDAVLQYAARTCAGQPVDVVAH HHCCCCCEEEEECCCCCCCCCCCHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH SVGGVVLGLAASNPIVRRALTVGAQYAYWRDYAGSHRLRMLAKWHVAMPMLARVFGYVPA HHCCEEEEECCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCH KRLGWMEDTPRGVALSWSRSRPRFEDAYVRAPIRETPDARRDLVERFTRLTAPMLAIGLS HHCCCCCCCCCCEEEEECCCCCCCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHEEECC DDEFGSVEAVERLLGYYTRSAVTHLRIAPEQIGVASIGHFAFFHSRFEQTLWPIALGWLK CCCCCCHHHHHHHHHHHHHHHHHHEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH TGALAPETPGRVHRQPCAPEPARAARDEASGRTAAR CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MQDSQPDALPPEPFVAPAADGFPVRGFAWRHRAPAAGRPVTVINCATSVRCRYYFRFAAY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH LFSQGSDVLVYDYRGIGESRPASLAGFHATWLDWGRLDCDAVLQYAARTCAGQPVDVVAH HHCCCCCEEEEECCCCCCCCCCCHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH SVGGVVLGLAASNPIVRRALTVGAQYAYWRDYAGSHRLRMLAKWHVAMPMLARVFGYVPA HHCCEEEEECCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCH KRLGWMEDTPRGVALSWSRSRPRFEDAYVRAPIRETPDARRDLVERFTRLTAPMLAIGLS HHCCCCCCCCCCEEEEECCCCCCCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHEEECC DDEFGSVEAVERLLGYYTRSAVTHLRIAPEQIGVASIGHFAFFHSRFEQTLWPIALGWLK CCCCCCHHHHHHHHHHHHHHHHHHEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH TGALAPETPGRVHRQPCAPEPARAARDEASGRTAAR CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA