| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719942
Identifier: 53719942
GI number: 53719942
Start: 2819230
End: 2820102
Strand: Reverse
Name: 53719942
Synonym: BPSL2332
Alternate gene names: NA
Gene position: 2820102-2819230 (Counterclockwise)
Preceding gene: 53719943
Following gene: 53719941
Centisome position: 69.21
GC content: 50.74
Gene sequence:
>873_bases ATGACAATACTGAAAGTAGGGCCAAGCTTGAAAGACAACGATGTCCTTTGGCGATATCTTCCGCTTGATAAGTTCATCGA CCTTGTAGAGTCCAAGACTCTATTCTTTGCACCTCTAGCTTGGTTCAGTAAGACCGATCCGTTTGAGGGGTATGCGCCGC AGGTCGCGATCAATGCGATGGCATCTGTCTCGAAGAAGTTCCGAGACCAACAGCTCGAAGCGATTAATCAAGTGGAAAGC AATATCCCGCAGGGTGTATCTCCGCAAGAGTTGCAAAAAATCAAAATGCAGTTGCAGCAGCTTCGCAAGAATGCCGAGTC GCATCTTCCTACGATGAGGGAAATCTTCAAAAACATTTCCGCGTGTACGATGGTCAACTGCTGGTACAAAAGTGATCACG AATCAGAGGGAATGTGGGGGTTGTATTCCAAAGGCGGTGTGGCGATCAGGACCAGCGTTGGAGCACTCCGGCGCGCGTTG AATCAAGGTGAGGAAGCGCCCGTTATCCATATCGGTTCGATTAAATATCTGGATTTTTCCGACCCGAACTTAAAGCCATC GGACTGCGTAACTGAGGATGGTCAGATGATCGGCATGATCAAGCGGATAGCATATGCACACGAGAAAGAGGTTAGGATGT ACATCGCTCGTGAGCGTGCGGGGGATAGCCTAGACTTGTTGGCGCCGGAATCAACGAGAGTATCGGTGAACGTTCAGGGC ATGCTGGAATCTGTTGTGATATCGCCCTTTGCTGGTGAAGCAATCGAGCGGAGTGTGCGTGCGGTCTGCCGGTGGAGCGG CGTGAGCGAAAGCATCGTCTCTCGTTCGAATCTGCTGGACAACTGCGAGTTTTTGCTAGACGCGTACGAGTGA
Upstream 100 bases:
>100_bases ATACAGCATTGATGCAGACGTGGTAGAGATTTTGAACGTCAAGCATGCGCGCCAAGAATGGCCGTGAACTGTTTACGTAG AGATACCCGGCGTAGAGGCT
Downstream 100 bases:
>100_bases GCGAAGGGGGCTGTTCGAGCGTCTTTGCAACCACTGCGACGAATGTCTCTTCGTGGTCGAGCGCCTACGGCGTTAGACGC GTTCCCCGACAGCCCTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTILKVGPSLKDNDVLWRYLPLDKFIDLVESKTLFFAPLAWFSKTDPFEGYAPQVAINAMASVSKKFRDQQLEAINQVES NIPQGVSPQELQKIKMQLQQLRKNAESHLPTMREIFKNISACTMVNCWYKSDHESEGMWGLYSKGGVAIRTSVGALRRAL NQGEEAPVIHIGSIKYLDFSDPNLKPSDCVTEDGQMIGMIKRIAYAHEKEVRMYIARERAGDSLDLLAPESTRVSVNVQG MLESVVISPFAGEAIERSVRAVCRWSGVSESIVSRSNLLDNCEFLLDAYE
Sequences:
>Translated_290_residues MTILKVGPSLKDNDVLWRYLPLDKFIDLVESKTLFFAPLAWFSKTDPFEGYAPQVAINAMASVSKKFRDQQLEAINQVES NIPQGVSPQELQKIKMQLQQLRKNAESHLPTMREIFKNISACTMVNCWYKSDHESEGMWGLYSKGGVAIRTSVGALRRAL NQGEEAPVIHIGSIKYLDFSDPNLKPSDCVTEDGQMIGMIKRIAYAHEKEVRMYIARERAGDSLDLLAPESTRVSVNVQG MLESVVISPFAGEAIERSVRAVCRWSGVSESIVSRSNLLDNCEFLLDAYE >Mature_289_residues TILKVGPSLKDNDVLWRYLPLDKFIDLVESKTLFFAPLAWFSKTDPFEGYAPQVAINAMASVSKKFRDQQLEAINQVESN IPQGVSPQELQKIKMQLQQLRKNAESHLPTMREIFKNISACTMVNCWYKSDHESEGMWGLYSKGGVAIRTSVGALRRALN QGEEAPVIHIGSIKYLDFSDPNLKPSDCVTEDGQMIGMIKRIAYAHEKEVRMYIARERAGDSLDLLAPESTRVSVNVQGM LESVVISPFAGEAIERSVRAVCRWSGVSESIVSRSNLLDNCEFLLDAYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32555; Mature: 32423
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILKVGPSLKDNDVLWRYLPLDKFIDLVESKTLFFAPLAWFSKTDPFEGYAPQVAINAM CEEEECCCCCCCCCCEEEEECHHHHHHHHHCCHHEEEHHHHHCCCCCCCCCCCHHHHHHH ASVSKKFRDQQLEAINQVESNIPQGVSPQELQKIKMQLQQLRKNAESHLPTMREIFKNIS HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ACTMVNCWYKSDHESEGMWGLYSKGGVAIRTSVGALRRALNQGEEAPVIHIGSIKYLDFS HHHEEEEHCCCCCCCCCCEEEECCCCEEEEHHHHHHHHHHHCCCCCCEEEECCEEEEECC DPNLKPSDCVTEDGQMIGMIKRIAYAHEKEVRMYIARERAGDSLDLLAPESTRVSVNVQG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEHHH MLESVVISPFAGEAIERSVRAVCRWSGVSESIVSRSNLLDNCEFLLDAYE HHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TILKVGPSLKDNDVLWRYLPLDKFIDLVESKTLFFAPLAWFSKTDPFEGYAPQVAINAM EEEECCCCCCCCCCEEEEECHHHHHHHHHCCHHEEEHHHHHCCCCCCCCCCCHHHHHHH ASVSKKFRDQQLEAINQVESNIPQGVSPQELQKIKMQLQQLRKNAESHLPTMREIFKNIS HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ACTMVNCWYKSDHESEGMWGLYSKGGVAIRTSVGALRRALNQGEEAPVIHIGSIKYLDFS HHHEEEEHCCCCCCCCCCEEEECCCCEEEEHHHHHHHHHHHCCCCCCEEEECCEEEEECC DPNLKPSDCVTEDGQMIGMIKRIAYAHEKEVRMYIARERAGDSLDLLAPESTRVSVNVQG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEHHH MLESVVISPFAGEAIERSVRAVCRWSGVSESIVSRSNLLDNCEFLLDAYE HHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA