| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is wzb [C]
Identifier: 53719901
GI number: 53719901
Start: 2758113
End: 2758592
Strand: Reverse
Name: wzb [C]
Synonym: BPSL2291
Alternate gene names: 53719901
Gene position: 2758592-2758113 (Counterclockwise)
Preceding gene: 53719902
Following gene: 53719900
Centisome position: 67.7
GC content: 69.38
Gene sequence:
>480_bases ATGAAAAGCGTCGCGATCTGTTTCGTCTGCCTCGGCAATATCTGCCGCTCGCCCACCGCGGAAGGGGTGATGCGCCATCA GGTGGCTGCAGCGGGGCTCGACGGGGCGATCGAGATCGATTCGGCCGGCACGGGCGACTGGCATGTCGGCGAAGCGCCCG ACGCGCGCGCGCAGCAAGCGGCGCGTGCGCGGGGCTACGATCTGTCGGCGCTGCGGGCGCGGCAGATCGGCGACGCCGAT TTCGAACGCTTCGATCTCGTGCTCGCGATGGACGGCGCCAATCTCGCGGCGTTGCGCAAGCGCTGCCCGCCGCAATATCG GGGCAAGGTCCGGCTCCTGATGGAATTCGCGGGCGACGGCTCGGCCGGCGACATCGCCGATCCATATTTCGGCGGCGCGC GCGGCTTCGAGCAGGTGCTCGATCAGTGCGAGGCCGCGTGCCGCGGCCTTCTCGACAGCCTGCGTGAAACGGCGCGCTGA
Upstream 100 bases:
>100_bases GCGCTGTGACGCGGCACCCGGCGCAAGCGGGAATTGGCGCGCCTTTGTATAATGGCGCGTTATCCATTCGAGCGGTTCGC CGCGCGTGTCCGGCTGCACG
Downstream 100 bases:
>100_bases GGCGCCGCATACAACCCCTTTTAGCGGCAGGGATACTTGACTAAATTGGTCAAATATTTATACTTGACCAAAATCGTCAA GATTGCTGCCCATTCAATAC
Product: low molecular weight phosphotyrosine protein phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKSVAICFVCLGNICRSPTAEGVMRHQVAAAGLDGAIEIDSAGTGDWHVGEAPDARAQQAARARGYDLSALRARQIGDAD FERFDLVLAMDGANLAALRKRCPPQYRGKVRLLMEFAGDGSAGDIADPYFGGARGFEQVLDQCEAACRGLLDSLRETAR
Sequences:
>Translated_159_residues MKSVAICFVCLGNICRSPTAEGVMRHQVAAAGLDGAIEIDSAGTGDWHVGEAPDARAQQAARARGYDLSALRARQIGDAD FERFDLVLAMDGANLAALRKRCPPQYRGKVRLLMEFAGDGSAGDIADPYFGGARGFEQVLDQCEAACRGLLDSLRETAR >Mature_159_residues MKSVAICFVCLGNICRSPTAEGVMRHQVAAAGLDGAIEIDSAGTGDWHVGEAPDARAQQAARARGYDLSALRARQIGDAD FERFDLVLAMDGANLAALRKRCPPQYRGKVRLLMEFAGDGSAGDIADPYFGGARGFEQVLDQCEAACRGLLDSLRETAR
Specific function: Dephosphorylates Wzc. Required For The Extracellular Polysaccharide Colanic Acid Synthesis. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI6005988, Length=150, Percent_Identity=40, Blast_Score=109, Evalue=8e-25, Organism=Homo sapiens, GI4757714, Length=150, Percent_Identity=38, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6325330, Length=155, Percent_Identity=33.5483870967742, Blast_Score=107, Evalue=6e-25, Organism=Drosophila melanogaster, GI78706770, Length=152, Percent_Identity=41.4473684210526, Blast_Score=119, Evalue=1e-27, Organism=Drosophila melanogaster, GI78706772, Length=152, Percent_Identity=41.4473684210526, Blast_Score=119, Evalue=1e-27, Organism=Drosophila melanogaster, GI78706766, Length=147, Percent_Identity=37.4149659863946, Blast_Score=103, Evalue=5e-23, Organism=Drosophila melanogaster, GI78706768, Length=147, Percent_Identity=37.4149659863946, Blast_Score=103, Evalue=5e-23, Organism=Drosophila melanogaster, GI78711846, Length=149, Percent_Identity=38.255033557047, Blast_Score=97, Evalue=6e-21, Organism=Drosophila melanogaster, GI78706764, Length=125, Percent_Identity=36.8, Blast_Score=91, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000106 - InterPro: IPR017867 [H]
Pfam domain/function: PF01451 LMWPc [H]
EC number: =3.1.3.48 [H]
Molecular weight: Translated: 16961; Mature: 16961
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSVAICFVCLGNICRSPTAEGVMRHQVAAAGLDGAIEIDSAGTGDWHVGEAPDARAQQA CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHH ARARGYDLSALRARQIGDADFERFDLVLAMDGANLAALRKRCPPQYRGKVRLLMEFAGDG HHHCCCCHHHHHHHHCCCCCHHHEEEEEEECCCCHHHHHHHCCCCCCCHHHHEEEECCCC SAGDIADPYFGGARGFEQVLDQCEAACRGLLDSLRETAR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSVAICFVCLGNICRSPTAEGVMRHQVAAAGLDGAIEIDSAGTGDWHVGEAPDARAQQA CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHH ARARGYDLSALRARQIGDADFERFDLVLAMDGANLAALRKRCPPQYRGKVRLLMEFAGDG HHHCCCCHHHHHHHHCCCCCHHHEEEEEEECCCCHHHHHHHCCCCCCCHHHHEEEECCCC SAGDIADPYFGGARGFEQVLDQCEAACRGLLDSLRETAR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]