| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719835
Identifier: 53719835
GI number: 53719835
Start: 2670822
End: 2671670
Strand: Reverse
Name: 53719835
Synonym: BPSL2226
Alternate gene names: NA
Gene position: 2671670-2670822 (Counterclockwise)
Preceding gene: 53719836
Following gene: 53719834
Centisome position: 65.57
GC content: 67.73
Gene sequence:
>849_bases ATGTCAAATCAGTTGATTCAATCCGGCGTCGATTTTTCCGGTTCGGTGTTCCTGGCGTCGAGCAACGTCCGTGCGAACGC GCATCGCCTGAACTGGCGCGCGAAAGTGCTCGTCAGCGGATATGCGGCGGATTTCAAGGGCAAGCGCGTGCTCGATCTCG CGAGCCACGATGGCCGCTTCATGCACGCGGCGCTCGCGCACGGCGCGACGAAGGTGGTCGGCGTCGAGGCGCGCGACGAC CATGTCGACAGCGCGCGGGCGAATCTCGCGCGAGGCGGTCATGATCGCGGCCGCTACGACGTCATCTGCGCGGATCTGGT GGAATACCTGAAGTCGGTCGACACGGGCGCGTTCGACACGATCCTCTGCTTCGGCGTGCTGAGCCATCTGATCGAGCACG TCGACATCGTGCGCGAAGTCGGCCGCATCGCGCCGGGCGCATTCATCCTCGATACGTGGGTCGCGCGCGAGCGGTGGAAC TTGCGCGAACGGCTGCGCAACCGGCGCGTCAACGCATTCGTGCGGCGCACCCAGCAAGGCGGGTTCGGCAGCGTGTCGGG CATCGCGCGCCTGCGCAGCTGGCTCAACGATGTGATCCCGAGCGGGCACAGCCGCACCGGCAATCTCGTGTTTCTTTACG AGGACGCGGCGGCGCCCGGCGCGACCGTGCGCCAGAGCGGGCTGATGGGCTGGGCGAACCGCTCGCTCGTCGAGATGCTG TTCGATCACTACGGGCTTGCGCACGAGCGCGTCGACTGGCGCGCGCAGGGCGTCGCCGACTGGAGCGAGCTCGAGGACTA TCGGCTCGGCAGGCGCGAGAGCTGGGTCGCGCGCGCGCGGCGCGCGTGA
Upstream 100 bases:
>100_bases ACGCACGCCGGCCACGGCCGCCGTCGCGTGAGGCGCGGGCGGCAGACACGCTCGCCGCGGATCGCCCGCGGCGGACCATT CAATTTAGCGCGAGTCCGAT
Downstream 100 bases:
>100_bases GAATCGAGAGGAGAGCGTCGTGAAGACATTCAGAGAGAAGGTTCGGGCCAGATGGCCGCATTACGACGACCGGCGCGGCG TGTTCCTGCCCGGCGCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSNQLIQSGVDFSGSVFLASSNVRANAHRLNWRAKVLVSGYAADFKGKRVLDLASHDGRFMHAALAHGATKVVGVEARDD HVDSARANLARGGHDRGRYDVICADLVEYLKSVDTGAFDTILCFGVLSHLIEHVDIVREVGRIAPGAFILDTWVARERWN LRERLRNRRVNAFVRRTQQGGFGSVSGIARLRSWLNDVIPSGHSRTGNLVFLYEDAAAPGATVRQSGLMGWANRSLVEML FDHYGLAHERVDWRAQGVADWSELEDYRLGRRESWVARARRA
Sequences:
>Translated_282_residues MSNQLIQSGVDFSGSVFLASSNVRANAHRLNWRAKVLVSGYAADFKGKRVLDLASHDGRFMHAALAHGATKVVGVEARDD HVDSARANLARGGHDRGRYDVICADLVEYLKSVDTGAFDTILCFGVLSHLIEHVDIVREVGRIAPGAFILDTWVARERWN LRERLRNRRVNAFVRRTQQGGFGSVSGIARLRSWLNDVIPSGHSRTGNLVFLYEDAAAPGATVRQSGLMGWANRSLVEML FDHYGLAHERVDWRAQGVADWSELEDYRLGRRESWVARARRA >Mature_281_residues SNQLIQSGVDFSGSVFLASSNVRANAHRLNWRAKVLVSGYAADFKGKRVLDLASHDGRFMHAALAHGATKVVGVEARDDH VDSARANLARGGHDRGRYDVICADLVEYLKSVDTGAFDTILCFGVLSHLIEHVDIVREVGRIAPGAFILDTWVARERWNL RERLRNRRVNAFVRRTQQGGFGSVSGIARLRSWLNDVIPSGHSRTGNLVFLYEDAAAPGATVRQSGLMGWANRSLVEMLF DHYGLAHERVDWRAQGVADWSELEDYRLGRRESWVARARRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31478; Mature: 31347
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQLIQSGVDFSGSVFLASSNVRANAHRLNWRAKVLVSGYAADFKGKRVLDLASHDGRF CCCHHHHCCCCCCCEEEEEECCCCCCHHHHCCEEEEEEECCCCCCCCCEEEEECCCCCHH MHAALAHGATKVVGVEARDDHVDSARANLARGGHDRGRYDVICADLVEYLKSVDTGAFDT HHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH ILCFGVLSHLIEHVDIVREVGRIAPGAFILDTWVARERWNLRERLRNRRVNAFVRRTQQG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GFGSVSGIARLRSWLNDVIPSGHSRTGNLVFLYEDAAAPGATVRQSGLMGWANRSLVEML CCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHH FDHYGLAHERVDWRAQGVADWSELEDYRLGRRESWVARARRA HHHHCCHHHHCCHHHCCCCCHHHHHHHHCCCHHHHHHHHCCC >Mature Secondary Structure SNQLIQSGVDFSGSVFLASSNVRANAHRLNWRAKVLVSGYAADFKGKRVLDLASHDGRF CCHHHHCCCCCCCEEEEEECCCCCCHHHHCCEEEEEEECCCCCCCCCEEEEECCCCCHH MHAALAHGATKVVGVEARDDHVDSARANLARGGHDRGRYDVICADLVEYLKSVDTGAFDT HHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH ILCFGVLSHLIEHVDIVREVGRIAPGAFILDTWVARERWNLRERLRNRRVNAFVRRTQQG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GFGSVSGIARLRSWLNDVIPSGHSRTGNLVFLYEDAAAPGATVRQSGLMGWANRSLVEML CCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHH FDHYGLAHERVDWRAQGVADWSELEDYRLGRRESWVARARRA HHHHCCHHHHCCHHHCCCCCHHHHHHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA