| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is gltX [H]
Identifier: 53719806
GI number: 53719806
Start: 2637135
End: 2638544
Strand: Reverse
Name: gltX [H]
Synonym: BPSL2197
Alternate gene names: 53719806
Gene position: 2638544-2637135 (Counterclockwise)
Preceding gene: 53719808
Following gene: 53719805
Centisome position: 64.76
GC content: 67.02
Gene sequence:
>1410_bases ATGACCCGTCCTGTACGCACCCGTTTTGCGCCGAGCCCCACCGGCTTCATCCATCTCGGCAACATCCGATCCGCGCTCTA TCCGTGGGCGTTCGCCCGCAAGATGAAGGGCACGTTCGTGCTGCGGATCGAGGATACGGATCTCGAGCGCTCGACCGAGG CGTCGGTCGATGCGATCCTCGAAGGGATGGCATGGCTTGGGCTCGACTACGACGAAGGCCCGTACTACCAGATGCAGCGG ATGGACCGCTATCGCGAGGTGCTCGCGCAGATGCTCGAGAAAGACCTCGTCTACCCGTGCTACATGTCGACCGAAGAACT CGATGCGTTGCGCGAGCGCCAGCGCGCGGCGGGCGAGAAGCCGCGCTACGATGGCACGTGGCGCCCCGAGCCGGGCAAGG TGCTGCCCGAGCCGCCGGCGGGCGTGACCCCCGTGCTGCGCTTTCGCAATCCGCTGACGGGGTCGGTCGTCTGGGACGAC GCCGTGAAGGGCCGCGTCGAGATCTCGAACGAGGAGCTCGACGATCTCGTCATCGCGCGCCCCGACGGCACGCCGACGTA CAACTTCTGCGTCGTCGTCGACGATCTCGACATGGGCATCACGCACGTGATCCGCGGGGACGACCATGTGAACAATACGC CGCGCCAGATCAACATCCTGCGCGCGCTCGGCGGCGAAGTGCCGGTGTACGCGCATCTGCCGACCGTGCTCAACGAGCAG GGCGAGAAGATGAGCAAGCGCCACGGCGCGATGAGCGTGATGGGCTACCGCGATGCCGGCTATCTGCCGGAGGCGGTGCT CAACTATCTCGCGCGTCTCGGCTGGTCGCACGGCGACGCGGAGATCTTCTCGCGCGAGCAGTTCGTCGAATGGTTCGATC TCGAGCATCTCGGCAAGTCGCCCGCGCAGTACGATCACAACAAGCTGAACTGGCTGAACAACCACTACATCAAGGAAGCG GACGACGCGCGCCTGGCCGAGCTGGCAAAGCCGTTCTTCGCGGCGCTCGGCATCGACGCCGACACGATCGCGCGGGGCCC GGACCTCGTGGGCGTGATGGGGCTGATGAAGGATCGCGCGTCGACGGTGAAGGAGATCGCGGAGAATTCGACGATGTTCT ACCGTGCGCCCGCCCCGGATGCGCAAGCGCTCGCGCAGCACGTGACCGACGCGGTGCGCCCGGCGCTCGCCGAGTTTGCC GCGGCGCTGAAGACGGCCGAGTGGACGAAGGAGGCGATCGCGGCCGCGCTGAAGGCCGTGCTCGGCGCGCACAAGCTGAA GATGCCGCAGCTTGCGATGCCGGTGCGCCTGCTCGTCGCGGGCACGACGCATACGCCGTCGATCGACGCGGTGCTGCTGC TGTTCGGCCGCGACGTCGTCGTGTCGCGCCTCGCGGCGGCGCTCGCATAG
Upstream 100 bases:
>100_bases CTTTCCGTTCCGGTCGCGTGCGCACCCGGCAGAGCCGTGCGGCGTGCGCCGCCGCGTCGTTTCAATTGATGCGCCGCTTG AGGCGTTCGAGCTATCGTTT
Downstream 100 bases:
>100_bases GCGCGCGGGGCGTCCGGGAAGCCGTGCGGTTGAGGCAACGAACCGAGGCAACGCACGCGTCGAATGCACGGCTTCCAAAA ATTTTGCGCGAACCGCAAAT
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MTRPVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIEDTDLERSTEASVDAILEGMAWLGLDYDEGPYYQMQR MDRYREVLAQMLEKDLVYPCYMSTEELDALRERQRAAGEKPRYDGTWRPEPGKVLPEPPAGVTPVLRFRNPLTGSVVWDD AVKGRVEISNEELDDLVIARPDGTPTYNFCVVVDDLDMGITHVIRGDDHVNNTPRQINILRALGGEVPVYAHLPTVLNEQ GEKMSKRHGAMSVMGYRDAGYLPEAVLNYLARLGWSHGDAEIFSREQFVEWFDLEHLGKSPAQYDHNKLNWLNNHYIKEA DDARLAELAKPFFAALGIDADTIARGPDLVGVMGLMKDRASTVKEIAENSTMFYRAPAPDAQALAQHVTDAVRPALAEFA AALKTAEWTKEAIAAALKAVLGAHKLKMPQLAMPVRLLVAGTTHTPSIDAVLLLFGRDVVVSRLAAALA
Sequences:
>Translated_469_residues MTRPVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIEDTDLERSTEASVDAILEGMAWLGLDYDEGPYYQMQR MDRYREVLAQMLEKDLVYPCYMSTEELDALRERQRAAGEKPRYDGTWRPEPGKVLPEPPAGVTPVLRFRNPLTGSVVWDD AVKGRVEISNEELDDLVIARPDGTPTYNFCVVVDDLDMGITHVIRGDDHVNNTPRQINILRALGGEVPVYAHLPTVLNEQ GEKMSKRHGAMSVMGYRDAGYLPEAVLNYLARLGWSHGDAEIFSREQFVEWFDLEHLGKSPAQYDHNKLNWLNNHYIKEA DDARLAELAKPFFAALGIDADTIARGPDLVGVMGLMKDRASTVKEIAENSTMFYRAPAPDAQALAQHVTDAVRPALAEFA AALKTAEWTKEAIAAALKAVLGAHKLKMPQLAMPVRLLVAGTTHTPSIDAVLLLFGRDVVVSRLAAALA >Mature_468_residues TRPVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIEDTDLERSTEASVDAILEGMAWLGLDYDEGPYYQMQRM DRYREVLAQMLEKDLVYPCYMSTEELDALRERQRAAGEKPRYDGTWRPEPGKVLPEPPAGVTPVLRFRNPLTGSVVWDDA VKGRVEISNEELDDLVIARPDGTPTYNFCVVVDDLDMGITHVIRGDDHVNNTPRQINILRALGGEVPVYAHLPTVLNEQG EKMSKRHGAMSVMGYRDAGYLPEAVLNYLARLGWSHGDAEIFSREQFVEWFDLEHLGKSPAQYDHNKLNWLNNHYIKEAD DARLAELAKPFFAALGIDADTIARGPDLVGVMGLMKDRASTVKEIAENSTMFYRAPAPDAQALAQHVTDAVRPALAEFAA ALKTAEWTKEAIAAALKAVLGAHKLKMPQLAMPVRLLVAGTTHTPSIDAVLLLFGRDVVVSRLAAALA
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=330, Percent_Identity=35.1515151515151, Blast_Score=196, Evalue=5e-50, Organism=Escherichia coli, GI1788743, Length=466, Percent_Identity=49.5708154506438, Blast_Score=463, Evalue=1e-132, Organism=Escherichia coli, GI226510925, Length=245, Percent_Identity=37.1428571428571, Blast_Score=140, Evalue=1e-34, Organism=Caenorhabditis elegans, GI71993394, Length=474, Percent_Identity=28.9029535864979, Blast_Score=179, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6324540, Length=362, Percent_Identity=35.0828729281768, Blast_Score=211, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6321192, Length=233, Percent_Identity=26.6094420600858, Blast_Score=73, Evalue=8e-14, Organism=Drosophila melanogaster, GI24665321, Length=498, Percent_Identity=28.9156626506024, Blast_Score=216, Evalue=3e-56,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 52177; Mature: 52046
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIEDTDLERSTEASVDAIL CCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH EGMAWLGLDYDEGPYYQMQRMDRYREVLAQMLEKDLVYPCYMSTEELDALRERQRAAGEK HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC PRYDGTWRPEPGKVLPEPPAGVTPVLRFRNPLTGSVVWDDAVKGRVEISNEELDDLVIAR CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCEEEECCCCCCCEEEEC PDGTPTYNFCVVVDDLDMGITHVIRGDDHVNNTPRQINILRALGGEVPVYAHLPTVLNEQ CCCCCCEEEEEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHH GEKMSKRHGAMSVMGYRDAGYLPEAVLNYLARLGWSHGDAEIFSREQFVEWFDLEHLGKS HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC PAQYDHNKLNWLNNHYIKEADDARLAELAKPFFAALGIDADTIARGPDLVGVMGLMKDRA CCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHH STVKEIAENSTMFYRAPAPDAQALAQHVTDAVRPALAEFAAALKTAEWTKEAIAAALKAV HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAHKLKMPQLAMPVRLLVAGTTHTPSIDAVLLLFGRDVVVSRLAAALA HHHHHCCCCHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TRPVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIEDTDLERSTEASVDAIL CCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH EGMAWLGLDYDEGPYYQMQRMDRYREVLAQMLEKDLVYPCYMSTEELDALRERQRAAGEK HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC PRYDGTWRPEPGKVLPEPPAGVTPVLRFRNPLTGSVVWDDAVKGRVEISNEELDDLVIAR CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCEEEECCCCCCCEEEEC PDGTPTYNFCVVVDDLDMGITHVIRGDDHVNNTPRQINILRALGGEVPVYAHLPTVLNEQ CCCCCCEEEEEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHH GEKMSKRHGAMSVMGYRDAGYLPEAVLNYLARLGWSHGDAEIFSREQFVEWFDLEHLGKS HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC PAQYDHNKLNWLNNHYIKEADDARLAELAKPFFAALGIDADTIARGPDLVGVMGLMKDRA CCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHH STVKEIAENSTMFYRAPAPDAQALAQHVTDAVRPALAEFAAALKTAEWTKEAIAAALKAV HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAHKLKMPQLAMPVRLLVAGTTHTPSIDAVLLLFGRDVVVSRLAAALA HHHHHCCCCHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA