| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is guaB [H]
Identifier: 53719740
GI number: 53719740
Start: 2557817
End: 2559277
Strand: Reverse
Name: guaB [H]
Synonym: BPSL2129
Alternate gene names: 53719740
Gene position: 2559277-2557817 (Counterclockwise)
Preceding gene: 53719741
Following gene: 53719739
Centisome position: 62.81
GC content: 67.42
Gene sequence:
>1461_bases ATGCGTCTGATCCAAAAAGCACTCACGTTCGATGACGTGCTCCTCGTCCCGGCGTTCTCCGACGTTCTGCCGCGCGACAC CAGCCTCAAGACCCAGCTGACCCGCAACATCTCCCTGAACATGCCGCTCGTGTCCGCCGCGATGGACACGGTCACCGAAG GCCGCCTCGCGATCGCGATGGCGCAGCAAGGCGGCGTCGGCATCGTCCACAAGAATCTCACCCCCGTCGAGCAGGCGCGC GAGGTCGCGAAGGTCAAGCGCTTCGAATCGGGCGTCGTGCGCGATCCGATCACCGTTCCGCCGAGCATGAAGGTGCGCGA CGTGATCGCGCTGTCGCGCCAGCATGGCATCTCGGGCTTCCCGGTCGTCGAAGGTCCGAAGCTCGTCGGCATCGTGACGA ACCGCGACCTGCGCTTCGAAACCCGCCTCGACGAGCCGGTCAAGTCGATCATGACGCCGCGCGAGCGCCTCGTGACGGTG GCCGAGGGCACGCCGCTCGCCGAGGCGAAGGCGCTGATGCACAGCCACCGTCTCGAGCGCGTGCTCGTCGTCAACGACGC GTTCGAGCTGCGCGGCCTGATGACGGTCAAGGACATCACGAAGCAGACCGAGCACCCGGAAGCGTGCAAGGACGAGCACG GCAAGCTGCGCGTCGGCGCGGCGGTCGGCGTCGGTGCGGACAACGAAGAGCGTGTCGAGCTGCTCGTGCAGGCGGGCGTC GACGTGATCGTCGTCGATACCGCGCACGGCCACAGCAAGGGCGTGCTCGAGCGCGTGCGCTGGGTCAAGCAGAACTTCCC GAAGGTCGAGGTGATCGGCGGCAACATCGCGACCGCGGCTGCCGCGAAGGCACTCGTCGAATACGGCGCGGACGCGGTGA AGGTCGGCATCGGCCCGGGCTCGATCTGTACGACGCGGATCGTCGCGGGCGTCGGCGTGCCGCAGATCAGCGCGATCGCG AACGTGTCGGATGCGCTGCGCGGCACCGGCGTGCCGTGCGTCGCCGACGGCGGCATCCGCTTCTCGGGCGACGTGTCGAA GGCGCTCGCCGCCGGCGCGAACGCGGTGATGATGGGCAGCATGTTCGCCGGCACCGAAGAGGCGCCGGGCGACGTGTTCC TCTACCAGGGCCGCCAGTACAAGTCGTATCGCGGCATGGGCTCGGTCGGCGCGATGAAGGACGGCGCGGCGGACCGCTAC TTCCAGGACAACTCCGCGAACATCGACAAGCTCGTGCCGGAAGGCATCGAAGGCCGCGTCGCGTACAAGGGCTCGGTCAA CGCGATCATCTTCCAGTTGATCGGCGGCGTGCGCGCGAGCATGGGCTACTGCGGCTGCAAGACGATCGCCGAGCTGCACG AGAAGGCCGAGTTCGTTCAGATCACCGCAGCCGGCATGCGCGAGTCGCACGTGCACGACGTGCAGATCACGAAGGAAGCC CCCAACTATCACGTGGACTGA
Upstream 100 bases:
>100_bases ATCCGAACGATTCGGGGCCCAAACGGCTAAGCCGTTGTTCGTGTTGTGAAAATTAACCGGGCATCGCGTATAATTCGGTT TTGCGCCTATAGGATTTGCC
Downstream 100 bases:
>100_bases TCGCCGATGAAACCGTTGCTGCGCGCCGTTCTTCTGATCGATGCCGTGCTGCTCGCCGCGTTCGGCGTGCTGTTCGTGCT GACCCCGTGGAAAGCGCTGT
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTQLTRNISLNMPLVSAAMDTVTEGRLAIAMAQQGGVGIVHKNLTPVEQAR EVAKVKRFESGVVRDPITVPPSMKVRDVIALSRQHGISGFPVVEGPKLVGIVTNRDLRFETRLDEPVKSIMTPRERLVTV AEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITKQTEHPEACKDEHGKLRVGAAVGVGADNEERVELLVQAGV DVIVVDTAHGHSKGVLERVRWVKQNFPKVEVIGGNIATAAAAKALVEYGADAVKVGIGPGSICTTRIVAGVGVPQISAIA NVSDALRGTGVPCVADGGIRFSGDVSKALAAGANAVMMGSMFAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRY FQDNSANIDKLVPEGIEGRVAYKGSVNAIIFQLIGGVRASMGYCGCKTIAELHEKAEFVQITAAGMRESHVHDVQITKEA PNYHVD
Sequences:
>Translated_486_residues MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTQLTRNISLNMPLVSAAMDTVTEGRLAIAMAQQGGVGIVHKNLTPVEQAR EVAKVKRFESGVVRDPITVPPSMKVRDVIALSRQHGISGFPVVEGPKLVGIVTNRDLRFETRLDEPVKSIMTPRERLVTV AEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITKQTEHPEACKDEHGKLRVGAAVGVGADNEERVELLVQAGV DVIVVDTAHGHSKGVLERVRWVKQNFPKVEVIGGNIATAAAAKALVEYGADAVKVGIGPGSICTTRIVAGVGVPQISAIA NVSDALRGTGVPCVADGGIRFSGDVSKALAAGANAVMMGSMFAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRY FQDNSANIDKLVPEGIEGRVAYKGSVNAIIFQLIGGVRASMGYCGCKTIAELHEKAEFVQITAAGMRESHVHDVQITKEA PNYHVD >Mature_486_residues MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTQLTRNISLNMPLVSAAMDTVTEGRLAIAMAQQGGVGIVHKNLTPVEQAR EVAKVKRFESGVVRDPITVPPSMKVRDVIALSRQHGISGFPVVEGPKLVGIVTNRDLRFETRLDEPVKSIMTPRERLVTV AEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITKQTEHPEACKDEHGKLRVGAAVGVGADNEERVELLVQAGV DVIVVDTAHGHSKGVLERVRWVKQNFPKVEVIGGNIATAAAAKALVEYGADAVKVGIGPGSICTTRIVAGVGVPQISAIA NVSDALRGTGVPCVADGGIRFSGDVSKALAAGANAVMMGSMFAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRY FQDNSANIDKLVPEGIEGRVAYKGSVNAIIFQLIGGVRASMGYCGCKTIAELHEKAEFVQITAAGMRESHVHDVQITKEA PNYHVD
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=479, Percent_Identity=41.9624217118998, Blast_Score=366, Evalue=1e-101, Organism=Homo sapiens, GI34328928, Length=479, Percent_Identity=41.9624217118998, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI156616279, Length=479, Percent_Identity=41.9624217118998, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI34328930, Length=479, Percent_Identity=41.9624217118998, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI66933016, Length=482, Percent_Identity=40.4564315352697, Blast_Score=360, Evalue=2e-99, Organism=Homo sapiens, GI217035152, Length=475, Percent_Identity=41.8947368421053, Blast_Score=359, Evalue=4e-99, Organism=Homo sapiens, GI217035148, Length=479, Percent_Identity=41.1273486430063, Blast_Score=354, Evalue=1e-97, Organism=Homo sapiens, GI217035150, Length=479, Percent_Identity=39.0396659707724, Blast_Score=325, Evalue=5e-89, Organism=Homo sapiens, GI156104880, Length=262, Percent_Identity=36.2595419847328, Blast_Score=169, Evalue=8e-42, Organism=Homo sapiens, GI50541956, Length=248, Percent_Identity=36.6935483870968, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI50541954, Length=248, Percent_Identity=36.6935483870968, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI50541952, Length=248, Percent_Identity=36.6935483870968, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI50541948, Length=248, Percent_Identity=36.6935483870968, Blast_Score=162, Evalue=6e-40, Organism=Escherichia coli, GI1788855, Length=487, Percent_Identity=62.8336755646817, Blast_Score=575, Evalue=1e-165, Organism=Escherichia coli, GI1786293, Length=239, Percent_Identity=34.3096234309623, Blast_Score=142, Evalue=7e-35, Organism=Caenorhabditis elegans, GI71994385, Length=478, Percent_Identity=38.0753138075314, Blast_Score=303, Evalue=9e-83, Organism=Caenorhabditis elegans, GI71994389, Length=425, Percent_Identity=39.2941176470588, Blast_Score=286, Evalue=2e-77, Organism=Caenorhabditis elegans, GI17560440, Length=239, Percent_Identity=36.8200836820084, Blast_Score=166, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6322012, Length=488, Percent_Identity=38.7295081967213, Blast_Score=352, Evalue=5e-98, Organism=Saccharomyces cerevisiae, GI6323585, Length=484, Percent_Identity=39.4628099173554, Blast_Score=350, Evalue=2e-97, Organism=Saccharomyces cerevisiae, GI6323464, Length=484, Percent_Identity=39.2561983471074, Blast_Score=343, Evalue=3e-95, Organism=Saccharomyces cerevisiae, GI6319352, Length=342, Percent_Identity=38.5964912280702, Blast_Score=261, Evalue=1e-70, Organism=Saccharomyces cerevisiae, GI6319353, Length=142, Percent_Identity=35.9154929577465, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24641071, Length=485, Percent_Identity=40.6185567010309, Blast_Score=352, Evalue=4e-97, Organism=Drosophila melanogaster, GI24641073, Length=485, Percent_Identity=40.6185567010309, Blast_Score=352, Evalue=4e-97, Organism=Drosophila melanogaster, GI28571163, Length=443, Percent_Identity=41.3092550790068, Blast_Score=318, Evalue=6e-87,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51899; Mature: 51899
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTQLTRNISLNMPLVSAAMDTVTEGRLAIAM CCHHHHHCCCCCEEEECCHHHHCCCCCCHHHHHCCCEEECCCHHHHHHHHHCCCCEEEEE AQQGGVGIVHKNLTPVEQAREVAKVKRFESGVVRDPITVPPSMKVRDVIALSRQHGISGF ECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC PVVEGPKLVGIVTNRDLRFETRLDEPVKSIMTPRERLVTVAEGTPLAEAKALMHSHRLER CEECCCEEEEEEECCCEEEHHHHHHHHHHHHCCHHHEEEEECCCCHHHHHHHHHHHHCCE VLVVNDAFELRGLMTVKDITKQTEHPEACKDEHGKLRVGAAVGVGADNEERVELLVQAGV EEEEECHHHHHCCHHHHHHHHCCCCCCHHHCCCCCEEEEEEEECCCCCHHHHHHHHHCCC DVIVVDTAHGHSKGVLERVRWVKQNFPKVEVIGGNIATAAAAKALVEYGADAVKVGIGPG CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC SICTTRIVAGVGVPQISAIANVSDALRGTGVPCVADGGIRFSGDVSKALAAGANAVMMGS CHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCEEECCCHHHHHHCCCCEEEEEH MFAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRYFQDNSANIDKLVPEGIEGRV HHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEE AYKGSVNAIIFQLIGGVRASMGYCGCKTIAELHEKAEFVQITAAGMRESHVHDVQITKEA EECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEECC PNYHVD CCCCCC >Mature Secondary Structure MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTQLTRNISLNMPLVSAAMDTVTEGRLAIAM CCHHHHHCCCCCEEEECCHHHHCCCCCCHHHHHCCCEEECCCHHHHHHHHHCCCCEEEEE AQQGGVGIVHKNLTPVEQAREVAKVKRFESGVVRDPITVPPSMKVRDVIALSRQHGISGF ECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC PVVEGPKLVGIVTNRDLRFETRLDEPVKSIMTPRERLVTVAEGTPLAEAKALMHSHRLER CEECCCEEEEEEECCCEEEHHHHHHHHHHHHCCHHHEEEEECCCCHHHHHHHHHHHHCCE VLVVNDAFELRGLMTVKDITKQTEHPEACKDEHGKLRVGAAVGVGADNEERVELLVQAGV EEEEECHHHHHCCHHHHHHHHCCCCCCHHHCCCCCEEEEEEEECCCCCHHHHHHHHHCCC DVIVVDTAHGHSKGVLERVRWVKQNFPKVEVIGGNIATAAAAKALVEYGADAVKVGIGPG CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC SICTTRIVAGVGVPQISAIANVSDALRGTGVPCVADGGIRFSGDVSKALAAGANAVMMGS CHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCEEECCCHHHHHHCCCCEEEEEH MFAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRYFQDNSANIDKLVPEGIEGRV HHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEE AYKGSVNAIIFQLIGGVRASMGYCGCKTIAELHEKAEFVQITAAGMRESHVHDVQITKEA EECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEECC PNYHVD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA