Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53719704

Identifier: 53719704

GI number: 53719704

Start: 2513634

End: 2513972

Strand: Reverse

Name: 53719704

Synonym: BPSL2093

Alternate gene names: NA

Gene position: 2513972-2513634 (Counterclockwise)

Preceding gene: 53719709

Following gene: 53719703

Centisome position: 61.7

GC content: 71.09

Gene sequence:

>339_bases
TTGCCGCGTGACGAAGGGAACAAAACGACGAAAGAGGCGAGGCCCGTGATGCGGCCGACGAAGATGGCGTTCGTGCTGGC
GCTCGCATGCGCCGGCTTCCTTGCTTCGGACTTCGCCTGCGCGCAGCGCCCGGAACGCGGCGCACCGCCGTCGCACAAGG
TGCCGCGCGGCAACGGCGCGGCGCGGCGTCCCGCGCCGCCCGGCGAGCCGCCCGCGCGCGCGGCCGCCGTTCCGCCCGAT
CTCGAGCAGCGCCGCCGCGACGGCCACATGACGCCGGAAGAACGGCATCTGTTGCGCCAGCATATCGAAGACGCGGTGCG
CGAACTTTACAAACGTTGA

Upstream 100 bases:

>100_bases
ACTCGAAGACGACATTCGGTGGATACTCCATCCACTTAACATTTACATGGTTTGCACGCCCGATTCTCGCAGGGTTTGTT
CGTGTGCCAAAGGTAGCCGG

Downstream 100 bases:

>100_bases
ATCGTTAAATCCGGCGTATCTCCGGCGTATCTCCGCTCGCGGTTCGTCGTCCTTCATCCGTCGTTCTTCGCCGGAAAAAT
TCCGTAGCAATTCGATCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MPRDEGNKTTKEARPVMRPTKMAFVLALACAGFLASDFACAQRPERGAPPSHKVPRGNGAARRPAPPGEPPARAAAVPPD
LEQRRRDGHMTPEERHLLRQHIEDAVRELYKR

Sequences:

>Translated_112_residues
MPRDEGNKTTKEARPVMRPTKMAFVLALACAGFLASDFACAQRPERGAPPSHKVPRGNGAARRPAPPGEPPARAAAVPPD
LEQRRRDGHMTPEERHLLRQHIEDAVRELYKR
>Mature_111_residues
PRDEGNKTTKEARPVMRPTKMAFVLALACAGFLASDFACAQRPERGAPPSHKVPRGNGAARRPAPPGEPPARAAAVPPDL
EQRRRDGHMTPEERHLLRQHIEDAVRELYKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12436; Mature: 12305

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRDEGNKTTKEARPVMRPTKMAFVLALACAGFLASDFACAQRPERGAPPSHKVPRGNGA
CCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
ARRPAPPGEPPARAAAVPPDLEQRRRDGHMTPEERHLLRQHIEDAVRELYKR
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
PRDEGNKTTKEARPVMRPTKMAFVLALACAGFLASDFACAQRPERGAPPSHKVPRGNGA
CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
ARRPAPPGEPPARAAAVPPDLEQRRRDGHMTPEERHLLRQHIEDAVRELYKR
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA