| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719668
Identifier: 53719668
GI number: 53719668
Start: 2459672
End: 2460508
Strand: Reverse
Name: 53719668
Synonym: BPSL2055
Alternate gene names: NA
Gene position: 2460508-2459672 (Counterclockwise)
Preceding gene: 53719673
Following gene: 53719667
Centisome position: 60.39
GC content: 70.61
Gene sequence:
>837_bases ATGACGATGGGACGACTGTATCGCGGCATGGATCGCGCGACGCTCGACCGCGCGTACGACAACACGCGGGCCGTAGCGGA TTTTCCGGCGGTGTTGGCCGATTTTCGCCGGCGCAGCGCGCAACTGTACGCGCGCGTTGGCGGCCGGCGCGAGGTGCGAT ACGGCGAGCGGCCGCGCGAGCGTTTCGACTGGCTTTCCTGCGGCCGCGCCGGTGCGCCGCGCTTCGTCTTCATTCACGGC GGTTACTGGCAAAACTGCGCGAAGGAGGATTTCGCGTTCGTGGCCGACGGCCCGCTCGCCGCGGGATTCGACGTCGTGCT CGCCGAATACACGCTCGCGCCCGAGGCGTCGATGACGCAGATCGTCGGCGAGATCGCCCGCCTGCTCGATCGGCTGAGCG CCGATCGCGACGGGCTCGGCGGCGCGGGGCGGCCGCTGTGCCTGAGCGGGCACTCGGCGGGCGGGCATCTGAGCGCCGTG CATCGCGGCCATGCGTGCGTGACGAGCACGCTTGCGATCAGCCCGCTCGTCGATCTCGAACCGATCAGCCTGTCGTGGCT CAACGACAAATTGCGGCTGAGCGAGCACGAGATCGCCGATTACAGCCCGTTGTTCCATGTCGGCAAGGGCGCGCCGACGA TCGTCGCGGTCGGTGCGCACGAGCTGCCGGAGCTCGTGCGCCACGCGGACGACTACGCGCACGCATGCGCGGCGGCGGGC GAGCCGGTGCGGCGCGTGCACGTGCCGGGGCGCACGCATTTCTCCGTGCTGGAGGAACTGGCGCAGCCGGACGGCGCGCT GACGCGCCTGCTCGGGGCGTTCGTCGGCGGCGCTTGA
Upstream 100 bases:
>100_bases ATAGCGCGGTGCCGAACCGGCGCATTTTTCGGATAGACGAGCGCGGCGGCGCGCATCGACAATCGAACCGAGGCGTTTTC CCTATCCCACTCACGGGGCA
Downstream 100 bases:
>100_bases CGCGGCGGTGAAGCGCGATCGCGCTTCGTGCGCCGGCGCGCGAGGCGCGGCGCCACGCGCCGCGGCCGGCGCGCGCGGGG CTGATCGGGCAACGGTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Esterase/Lipase/Thioesterase; Esterase/Lipase-Like Protein; Arylformamidase; Esterase/Lipase; N-Acetylanthranilate Amidase; Lipase/Esterase; Esterase/Lipase/Thiestherase Protein; Aylformamidase; Lipase; Kynurenine Formamidase; Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Domain-Containing Protein; Hydrolase; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Alpha/Beta Hydrolase Fold-3 Domain Protein
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MTMGRLYRGMDRATLDRAYDNTRAVADFPAVLADFRRRSAQLYARVGGRREVRYGERPRERFDWLSCGRAGAPRFVFIHG GYWQNCAKEDFAFVADGPLAAGFDVVLAEYTLAPEASMTQIVGEIARLLDRLSADRDGLGGAGRPLCLSGHSAGGHLSAV HRGHACVTSTLAISPLVDLEPISLSWLNDKLRLSEHEIADYSPLFHVGKGAPTIVAVGAHELPELVRHADDYAHACAAAG EPVRRVHVPGRTHFSVLEELAQPDGALTRLLGAFVGGA
Sequences:
>Translated_278_residues MTMGRLYRGMDRATLDRAYDNTRAVADFPAVLADFRRRSAQLYARVGGRREVRYGERPRERFDWLSCGRAGAPRFVFIHG GYWQNCAKEDFAFVADGPLAAGFDVVLAEYTLAPEASMTQIVGEIARLLDRLSADRDGLGGAGRPLCLSGHSAGGHLSAV HRGHACVTSTLAISPLVDLEPISLSWLNDKLRLSEHEIADYSPLFHVGKGAPTIVAVGAHELPELVRHADDYAHACAAAG EPVRRVHVPGRTHFSVLEELAQPDGALTRLLGAFVGGA >Mature_277_residues TMGRLYRGMDRATLDRAYDNTRAVADFPAVLADFRRRSAQLYARVGGRREVRYGERPRERFDWLSCGRAGAPRFVFIHGG YWQNCAKEDFAFVADGPLAAGFDVVLAEYTLAPEASMTQIVGEIARLLDRLSADRDGLGGAGRPLCLSGHSAGGHLSAVH RGHACVTSTLAISPLVDLEPISLSWLNDKLRLSEHEIADYSPLFHVGKGAPTIVAVGAHELPELVRHADDYAHACAAAGE PVRRVHVPGRTHFSVLEELAQPDGALTRLLGAFVGGA
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI192807282, Length=287, Percent_Identity=25.4355400696864, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI224465228, Length=297, Percent_Identity=25.5892255892256, Blast_Score=85, Evalue=7e-17, Organism=Drosophila melanogaster, GI19920830, Length=290, Percent_Identity=26.8965517241379, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30093; Mature: 29962
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMGRLYRGMDRATLDRAYDNTRAVADFPAVLADFRRRSAQLYARVGGRREVRYGERPRE CCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH RFDWLSCGRAGAPRFVFIHGGYWQNCAKEDFAFVADGPLAAGFDVVLAEYTLAPEASMTQ HHHHHHCCCCCCCEEEEEECCHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCHHHHH IVGEIARLLDRLSADRDGLGGAGRPLCLSGHSAGGHLSAVHRGHACVTSTLAISPLVDLE HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHHCCCCCCC PISLSWLNDKLRLSEHEIADYSPLFHVGKGAPTIVAVGAHELPELVRHADDYAHACAAAG CCCHHHCCCHHHCCHHHHCCCCCHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCC EPVRRVHVPGRTHFSVLEELAQPDGALTRLLGAFVGGA CCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure TMGRLYRGMDRATLDRAYDNTRAVADFPAVLADFRRRSAQLYARVGGRREVRYGERPRE CHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH RFDWLSCGRAGAPRFVFIHGGYWQNCAKEDFAFVADGPLAAGFDVVLAEYTLAPEASMTQ HHHHHHCCCCCCCEEEEEECCHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCHHHHH IVGEIARLLDRLSADRDGLGGAGRPLCLSGHSAGGHLSAVHRGHACVTSTLAISPLVDLE HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHHCCCCCCC PISLSWLNDKLRLSEHEIADYSPLFHVGKGAPTIVAVGAHELPELVRHADDYAHACAAAG CCCHHHCCCHHHCCHHHHCCCCCHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCC EPVRRVHVPGRTHFSVLEELAQPDGALTRLLGAFVGGA CCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA