| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719660
Identifier: 53719660
GI number: 53719660
Start: 2449384
End: 2449977
Strand: Reverse
Name: 53719660
Synonym: BPSL2048
Alternate gene names: NA
Gene position: 2449977-2449384 (Counterclockwise)
Preceding gene: 53719661
Following gene: 53719659
Centisome position: 60.13
GC content: 47.81
Gene sequence:
>594_bases ATGAATAAGTGCTTTGTTAAATTGAATGGACTTATTGCGTTGTTTGTGTTTGCGATTTTGATGTGTGGCGGCTGTTCGCG TACATCGCAAAGCTCGTCCGATGAAGCTGAAATGAAACATGAAGTGACATCATCCTCGGAAAGTGAGGTGATGAGTTTGA ATTTAAATGCGCTGAATTATACGGAAATTCCAATAGGGAAATTCTATGTCGATGGCACTTGGGGCGGCAATGTCAGATCC CGCATCGGAAGCGGTGGACTTGGCATCCTGTGTTGCGTTTCGCTGCCCAAGAAATGGCGCCCCGGATTGACTGTAACAGT CGAGTGGCGCGACGATGAGATGTATAAAAATGATCCAAATTCATTGACAAGTCGAGTGGTTCCTGTCGAAAAGTACGAGT ACTTCTCGGATGGATTCCTCTGGGTATTATTTTTTCCAGGCGGAAAGATTAAGGCCTATGCATCGCAATGGATGCCGGGA TTTCCCGGGTTTCCAGAAGGGCTGCAAGCACCAAATGTAGCCTGCCCCGGGCATTTCACCTTATTGAACAGTGACCCGCG ATGCCCCGCGCCTGATAACAGGATCAAGCCATGA
Upstream 100 bases:
>100_bases TCCCGGAAGGGTTGCAGACGCCGGACAGCCCGTGTCCGGAGCACTTCACGCGTCTGAGCGACGATCCGCGCTGTTCGCAG CCTGGCAAGAGAATCAAATT
Downstream 100 bases:
>100_bases GTTATCGTTTCGCATCCGCCGACCGATTTGATGTTAATGTCGTTACGAAAGACGAGCAGGACGCTATTTTGCGGAGGCTG CATGAAGATGACGGCATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MNKCFVKLNGLIALFVFAILMCGGCSRTSQSSSDEAEMKHEVTSSSESEVMSLNLNALNYTEIPIGKFYVDGTWGGNVRS RIGSGGLGILCCVSLPKKWRPGLTVTVEWRDDEMYKNDPNSLTSRVVPVEKYEYFSDGFLWVLFFPGGKIKAYASQWMPG FPGFPEGLQAPNVACPGHFTLLNSDPRCPAPDNRIKP
Sequences:
>Translated_197_residues MNKCFVKLNGLIALFVFAILMCGGCSRTSQSSSDEAEMKHEVTSSSESEVMSLNLNALNYTEIPIGKFYVDGTWGGNVRS RIGSGGLGILCCVSLPKKWRPGLTVTVEWRDDEMYKNDPNSLTSRVVPVEKYEYFSDGFLWVLFFPGGKIKAYASQWMPG FPGFPEGLQAPNVACPGHFTLLNSDPRCPAPDNRIKP >Mature_197_residues MNKCFVKLNGLIALFVFAILMCGGCSRTSQSSSDEAEMKHEVTSSSESEVMSLNLNALNYTEIPIGKFYVDGTWGGNVRS RIGSGGLGILCCVSLPKKWRPGLTVTVEWRDDEMYKNDPNSLTSRVVPVEKYEYFSDGFLWVLFFPGGKIKAYASQWMPG FPGFPEGLQAPNVACPGHFTLLNSDPRCPAPDNRIKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21744; Mature: 21744
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKCFVKLNGLIALFVFAILMCGGCSRTSQSSSDEAEMKHEVTSSSESEVMSLNLNALNY CCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEE TEIPIGKFYVDGTWGGNVRSRIGSGGLGILCCVSLPKKWRPGLTVTVEWRDDEMYKNDPN EECCCCEEEECCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCC SLTSRVVPVEKYEYFSDGFLWVLFFPGGKIKAYASQWMPGFPGFPEGLQAPNVACPGHFT HHHHHCCCHHHHHCCCCCEEEEEEECCCCEEEEHHHCCCCCCCCCCCCCCCCCCCCCEEE LLNSDPRCPAPDNRIKP EECCCCCCCCCCCCCCC >Mature Secondary Structure MNKCFVKLNGLIALFVFAILMCGGCSRTSQSSSDEAEMKHEVTSSSESEVMSLNLNALNY CCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEE TEIPIGKFYVDGTWGGNVRSRIGSGGLGILCCVSLPKKWRPGLTVTVEWRDDEMYKNDPN EECCCCEEEECCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCC SLTSRVVPVEKYEYFSDGFLWVLFFPGGKIKAYASQWMPGFPGFPEGLQAPNVACPGHFT HHHHHCCCHHHHHCCCCCEEEEEEECCCCEEEEHHHCCCCCCCCCCCCCCCCCCCCCEEE LLNSDPRCPAPDNRIKP EECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA