| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719657
Identifier: 53719657
GI number: 53719657
Start: 2443066
End: 2443557
Strand: Reverse
Name: 53719657
Synonym: BPSL2045
Alternate gene names: NA
Gene position: 2443557-2443066 (Counterclockwise)
Preceding gene: 53719658
Following gene: 53719656
Centisome position: 59.97
GC content: 57.52
Gene sequence:
>492_bases ATGCATCGAATCTTCCGAAATAGTGTGATTGGCGTATTGTGGTGCGGGTGTGTTGCGCAAGCGGGAGCGATGTCTCGAGG CCCGGTGCCTTTGGATGTCAAGCGCATCGATGGCAAGCCGGCGGCGTGTATTCCGACGAGCGACGAAGGGCAAGCCGAAA TGCGGCTCGGTTTCATTGGCGTGAGCCGAGCCACGGGGCCAGTCAGTCCCGATGTCATTTATTGGCAAGTCGAAGTGTCG GACAACGTTCCCCCCGTCTACCTTAAGCGTGGCGACTGCATTGTTTATGGTCAGTCGATTCCCGGGGCAACGGTGCTGAC GCCGCCAAAGCGGTTCGATATCGGCAAGTGGTACAACTTCGCGGTCATGCCGGGGGGGAAGGCCGAGGGCCCCATATATA GAGGAACGTTTTGCATATCCGGAAAGCAGGGCGATAGTGGGCGCGTCGTATTGCGTTCCGAAAACAAGGATGCATGCTCT AGCGGAAGATGA
Upstream 100 bases:
>100_bases CTCATTGTCGTGGACAATCGAGGTGAGTTGATTCATGCGCAACCAGGAAGCAAGAATCAACTTCGCCAAGTGCTGGCTCC ACTTCTACAGGATCCCAAGG
Downstream 100 bases:
>100_bases CGGTGTGAGCAGGGGCTGGATATGCGCTTCACGACATGCGAAACGCTGCATGCCCCACACGTACGATGCGGATTCCGCGT TGCACGTGCGTGCATGTGTA
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MHRIFRNSVIGVLWCGCVAQAGAMSRGPVPLDVKRIDGKPAACIPTSDEGQAEMRLGFIGVSRATGPVSPDVIYWQVEVS DNVPPVYLKRGDCIVYGQSIPGATVLTPPKRFDIGKWYNFAVMPGGKAEGPIYRGTFCISGKQGDSGRVVLRSENKDACS SGR
Sequences:
>Translated_163_residues MHRIFRNSVIGVLWCGCVAQAGAMSRGPVPLDVKRIDGKPAACIPTSDEGQAEMRLGFIGVSRATGPVSPDVIYWQVEVS DNVPPVYLKRGDCIVYGQSIPGATVLTPPKRFDIGKWYNFAVMPGGKAEGPIYRGTFCISGKQGDSGRVVLRSENKDACS SGR >Mature_163_residues MHRIFRNSVIGVLWCGCVAQAGAMSRGPVPLDVKRIDGKPAACIPTSDEGQAEMRLGFIGVSRATGPVSPDVIYWQVEVS DNVPPVYLKRGDCIVYGQSIPGATVLTPPKRFDIGKWYNFAVMPGGKAEGPIYRGTFCISGKQGDSGRVVLRSENKDACS SGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17489; Mature: 17489
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRIFRNSVIGVLWCGCVAQAGAMSRGPVPLDVKRIDGKPAACIPTSDEGQAEMRLGFIG CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEECCCCCCCEEEEEEEEE VSRATGPVSPDVIYWQVEVSDNVPPVYLKRGDCIVYGQSIPGATVLTPPKRFDIGKWYNF ECCCCCCCCCCEEEEEEEECCCCCEEEEECCCEEEECCCCCCCEEECCCCCCCCCCEEEE AVMPGGKAEGPIYRGTFCISGKQGDSGRVVLRSENKDACSSGR EEECCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MHRIFRNSVIGVLWCGCVAQAGAMSRGPVPLDVKRIDGKPAACIPTSDEGQAEMRLGFIG CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEECCCCCCCEEEEEEEEE VSRATGPVSPDVIYWQVEVSDNVPPVYLKRGDCIVYGQSIPGATVLTPPKRFDIGKWYNF ECCCCCCCCCCEEEEEEEECCCCCEEEEECCCEEEECCCCCCCEEECCCCCCCCCCEEEE AVMPGGKAEGPIYRGTFCISGKQGDSGRVVLRSENKDACSSGR EEECCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA