| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719655
Identifier: 53719655
GI number: 53719655
Start: 2442210
End: 2442749
Strand: Reverse
Name: 53719655
Synonym: BPSL2043
Alternate gene names: NA
Gene position: 2442749-2442210 (Counterclockwise)
Preceding gene: 53719656
Following gene: 53719654
Centisome position: 59.95
GC content: 61.11
Gene sequence:
>540_bases GTGCTTGGACTAACGAAGTCAACGCTTGGTAAGCGCGGCTGTAGTTCGTGCGGAGCGATTCTTCATGGCGTGATCGCAGT CGGTGTGTCGTGCGCGATGTCTTCGGCCGTGGCAATGTCGCGCGGCCCGGTGCGCGTGGACATCAAGCGGATCGATGGTC AACCGGCCGCCCGTATTCCGGAGAGCGACGATACGGGCAACGAGTGGGTACGTCTTCATATCGCCGGTGTCGGCAGAGCG ACGGGGCCCGCTAGTCCGGCCGTCGTTTATTGGGTTATCACCGTGCCGGACGATGTGCCACCCGTTTATCTGAAGCGCGG CGAATGCGTCGTTTTCGGACAAAGGATCCCCGGGGCGACGGTGGAGACGCCGCCGAAGCCGTTCGATGTCGACAAACGGT ACAACTTTGCGCTCGTTACGAGCAGTGAGAGTGGAGCCTGGATATACAAGGGCAATTTTTGCGTGCGCGAGAAGCTCGGC AGTGGGACGCGCGCGGTGTTACTCAACGAAGACAGCGATCCTTGCCCGCGGGGACGATGA
Upstream 100 bases:
>100_bases ATCGAGGTGATTTTTCACGAGGAGAAAACGAGTGCGGCTCCGATGAGTCCTTGGGCATCGATGGATCTGGTGGGAGAGTC ATGTGCGTTACGCCGATCGA
Downstream 100 bases:
>100_bases ATCGCTTGAATGACGGGGCGCTAATTATCGTGAGTTTCGCTTCGGCGCTATCGAATTGCTGCCAAGTTTGCCAGCACTCG GCGCGAAGTACGACGTGCGT
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MLGLTKSTLGKRGCSSCGAILHGVIAVGVSCAMSSAVAMSRGPVRVDIKRIDGQPAARIPESDDTGNEWVRLHIAGVGRA TGPASPAVVYWVITVPDDVPPVYLKRGECVVFGQRIPGATVETPPKPFDVDKRYNFALVTSSESGAWIYKGNFCVREKLG SGTRAVLLNEDSDPCPRGR
Sequences:
>Translated_179_residues MLGLTKSTLGKRGCSSCGAILHGVIAVGVSCAMSSAVAMSRGPVRVDIKRIDGQPAARIPESDDTGNEWVRLHIAGVGRA TGPASPAVVYWVITVPDDVPPVYLKRGECVVFGQRIPGATVETPPKPFDVDKRYNFALVTSSESGAWIYKGNFCVREKLG SGTRAVLLNEDSDPCPRGR >Mature_179_residues MLGLTKSTLGKRGCSSCGAILHGVIAVGVSCAMSSAVAMSRGPVRVDIKRIDGQPAARIPESDDTGNEWVRLHIAGVGRA TGPASPAVVYWVITVPDDVPPVYLKRGECVVFGQRIPGATVETPPKPFDVDKRYNFALVTSSESGAWIYKGNFCVREKLG SGTRAVLLNEDSDPCPRGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19012; Mature: 19012
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGLTKSTLGKRGCSSCGAILHGVIAVGVSCAMSSAVAMSRGPVRVDIKRIDGQPAARIP CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC ESDDTGNEWVRLHIAGVGRATGPASPAVVYWVITVPDDVPPVYLKRGECVVFGQRIPGAT CCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCEEEECCCEEEECCCCCCCC VETPPKPFDVDKRYNFALVTSSESGAWIYKGNFCVREKLGSGTRAVLLNEDSDPCPRGR CCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEEEEECCCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure MLGLTKSTLGKRGCSSCGAILHGVIAVGVSCAMSSAVAMSRGPVRVDIKRIDGQPAARIP CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC ESDDTGNEWVRLHIAGVGRATGPASPAVVYWVITVPDDVPPVYLKRGECVVFGQRIPGAT CCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCEEEECCCEEEECCCCCCCC VETPPKPFDVDKRYNFALVTSSESGAWIYKGNFCVREKLGSGTRAVLLNEDSDPCPRGR CCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEEEEECCCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA