| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719650
Identifier: 53719650
GI number: 53719650
Start: 2434826
End: 2437660
Strand: Reverse
Name: 53719650
Synonym: BPSL2039
Alternate gene names: NA
Gene position: 2437660-2434826 (Counterclockwise)
Preceding gene: 53719651
Following gene: 53719649
Centisome position: 59.83
GC content: 54.32
Gene sequence:
>2835_bases TTGCCGCCGACCGTCTGTCAGTTCTGCGATAAAAAAGGCCTTCCGATTCTACCGCTGCGGTATGCGGTTGCACGACAGGA CAAAGGCAATGCGCCCGTGTTGAAGGCGCCATTCTCGGCGATCGACAAGAAAAAGGAGCAGGGCAAGGAATTGAGCAAGT TCGACCTTCCCGCCGACCTTGCTCACTACACGACGCGATTGTTGCGTCCCGGCTATCTGTATGTTTACGACGAGGCGCGC AAGGAGTGGAGTGCGTACGTTGTGACGAAAGGAGCCTATCTGTTCCAGTTCGATCCTTATGCGAAAGTCCCGCCGGGTGG ATGGGGCAAGGTCGAATTCAGTTGCAAGCGAGAAGGCGATGCGTTCATTGCGCGCTGCGTCACGGTCAAGAACGCGACGA AAGCGACGAAAGTATGGCTTGGCTTTTCGGATGTCGCGTGGACGAAAGACGTGTTGGACAAACACAGTTCGCCGGCTTAT CGCGAGGCTCACATGCGCAGTATCGACATCGCAGCATGGCGAGGCGGCGGCAGTCAATCCCACGTGGCGCCGTTTTCCGA ACTGGCGAGCCGGGTGGCCGAATATGCCGCGACGCCTGACATGTTGAATAAGGAGACGGCGGCTTATGTCACGGCTTTGC TGCCGGTGCCCTATAAGGCTCCCGCGCAGATGCTTGCCACGGACGCGACGACGAAGCGCGCATTGGCGATGAGTTCGTCG TTGATCAAGGATCTGTTGCCTGCGGCGGTGAGTGCGAAATCGGCGGAAAAAGGCAAAGTCGTGTCGGCGGCTTGGGCCTT TTCACCTCAGGATTTCTATGCGGATGCGATTGACGCACAAGCGATGGTCGCGTGGGGAACGCGGACGGCAAAGCCATACC GGCCCGCTCTAGTCGCGCTTGACGACCCTGCGGGCATGGCGCTCGAGCTCAACGGCCTGGCGTTGCAGCGCAGCGCGGAA TTCAGTGAGAATCCCCAGCGCAAATGGAAGCACGATACGGCGCTGCTGATCGGTGCGCTGAAGGAAGCCGTGGGGCACGG CGCGGTCGAGGACGATATTCGAAGCAATCAGAGTGCGGCCGATATCGCGGAAGGCATGGCGAATATCGAGGGTGGCGATC AGACGACCGATGCGCTGACGCTGATGACGCAGGGCTATGGCGCCTACAAGCGGCGGCTCGCCGAGCGTGAGCGGGCGAGA ACCGAAGAGCGCGAACGCATTCGCGACGCGAGCGAAGCCAAGTCTGGCATGCTCGGGGACGAGGCTTGGAAGAAGTACAC ATCCTATTACGACAAGTCTCGTGTCGAGCAGGAACTGGCGGACTATCAGACGAAACTGACGGATTTCAGCAATCAGACAT TGGCCAAGCTCGATGTGCCGTATCTGGCTTGGTTGAGGAGCGGTGCATTTTCGAGCTATCTCAGTCACAACTTCGATTCG AAGGATCTTGATAGTGGGGCGTCTTATACGGCGCTGATCACTCAGATCATTCACAATGCTAGTGGTCGGACGACGTTATT TGATTTTTTTACGGAGTGCTTGAAGTTGGACCCCAAATTGCCAGAAGCTTGGCTACTGCGGGCTGGCGCGTTCAACAACG ACATGTTGATCAAGGGGTGGCTAAGCAAAGTGGCAGAAAACGGCGGGAAGTCTGATTTTCCGTTGGCGGATCTTGCCGAG AAGTTCCATGACAAGTTCAAGGACGTCATGGTGGCCGGAGGAAAAGGAGAGCTGAAAGCGAAATATCTGGACTGCATCGC TCGGTTTGTTTACCAATATAGTGGGCCGCTTGTCAAGTTGATAACGGATGAAATTGATAAGGTCACGACTCTCGCCGTTG GGAGTTTGAGGGTGAGATGGCAGATGGGCTTGTTGGGCTGTGTGGCACGGGAGGGAAATCCCAATTTGAAATTGGTCGAT CTGCGTGGAATGCAAAGTTTCAGCGACGCGACCAAGGCGTTGGCAAAGATGCTTGCAGCTATGGGAGGAGGCGATGAGAA ACGACTAAGAGAGAGCGTGCGCCCTTCACTGAGACGGAATATGAATACCAGTGAGAAATTTCCTTTTAGAGGGGTTGCAC TGGTGGATGCAGCCAAGGTCGCGACGCTACCGGGGGCAACAGAGGAACTCAAACAGGGGATGGCGGGCGCGCTTCAAATT CAGGATTTTGGCGAAATCATGCGTGGTACCGTTCGCAAGCTCGGTAATTTGGAGGTCAAGGTTGGTGTGGTTCAGGCAAT TTTGTCATCCGTCACGCTGGCAAATTCCTATAAGGAGATGAAAAAGGCTGGGGCAGACAAAATTGCAGATAAGACTGTGA ATTTCGTGGGCGGCGTGGCCGGGTTAGTGGGGGGGATAACTGAAACTACGGGGAATATGCTTGAGAAAACAGCATGGGGA GCGACCAAGACTAGCTGGCAATTCAAGTTTCAAGCTATTCAAATCGAATCCCGTGCATCCTGGATGACTGGGCTTGGTAA AATTTTAGGCGTAGTTGGAGGTGTGGTTGGTGGTGTGTTCGCCGTAAAGGACAGCTATGAGATGCGAGAGAGGCATCCGG TCTTTGCTATCGCAATGCTTACATTGGGAACCTTTTCAATCGCTGCTTCTTTTTTGCTTTTGTTTTCGGCGATGGCTGGG GTGGGGTTTATTTTGGGGGTGGTGATTGCAATAATTATTTTCGTTGTTGCGCTATTTAAGCCTAATGCGCTCCAGGACTG GCTGAGTGATACGGTTTATGGATTCAGAGAGAAGAGTGGTGGACGTAAGTTTCAATTTAAAGGGTTGGCAGACCAGCAAC TATCGCTGGAATCAATGAGTAAGGGGGAGGGTTGA
Upstream 100 bases:
>100_bases ATCGCTGTGACGATCTCGACGATGCGACCATGCAACGCGTGGTCGACGAAATGAACCATCCATACAAGGAACATGTATGA ATTCGTCCGCTGGCTCTTCC
Downstream 100 bases:
>100_bases ATATATGTATACGGGATGGATGGCACCTTTTCCTATAAATCGAAAATTGGAGGCATGGGAAAAAGAGGGTGGGTTGCCTC GGATTCGCCAGAATGGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 944; Mature: 943
Protein sequence:
>944_residues MPPTVCQFCDKKGLPILPLRYAVARQDKGNAPVLKAPFSAIDKKKEQGKELSKFDLPADLAHYTTRLLRPGYLYVYDEAR KEWSAYVVTKGAYLFQFDPYAKVPPGGWGKVEFSCKREGDAFIARCVTVKNATKATKVWLGFSDVAWTKDVLDKHSSPAY REAHMRSIDIAAWRGGGSQSHVAPFSELASRVAEYAATPDMLNKETAAYVTALLPVPYKAPAQMLATDATTKRALAMSSS LIKDLLPAAVSAKSAEKGKVVSAAWAFSPQDFYADAIDAQAMVAWGTRTAKPYRPALVALDDPAGMALELNGLALQRSAE FSENPQRKWKHDTALLIGALKEAVGHGAVEDDIRSNQSAADIAEGMANIEGGDQTTDALTLMTQGYGAYKRRLAERERAR TEERERIRDASEAKSGMLGDEAWKKYTSYYDKSRVEQELADYQTKLTDFSNQTLAKLDVPYLAWLRSGAFSSYLSHNFDS KDLDSGASYTALITQIIHNASGRTTLFDFFTECLKLDPKLPEAWLLRAGAFNNDMLIKGWLSKVAENGGKSDFPLADLAE KFHDKFKDVMVAGGKGELKAKYLDCIARFVYQYSGPLVKLITDEIDKVTTLAVGSLRVRWQMGLLGCVAREGNPNLKLVD LRGMQSFSDATKALAKMLAAMGGGDEKRLRESVRPSLRRNMNTSEKFPFRGVALVDAAKVATLPGATEELKQGMAGALQI QDFGEIMRGTVRKLGNLEVKVGVVQAILSSVTLANSYKEMKKAGADKIADKTVNFVGGVAGLVGGITETTGNMLEKTAWG ATKTSWQFKFQAIQIESRASWMTGLGKILGVVGGVVGGVFAVKDSYEMRERHPVFAIAMLTLGTFSIAASFLLLFSAMAG VGFILGVVIAIIIFVVALFKPNALQDWLSDTVYGFREKSGGRKFQFKGLADQQLSLESMSKGEG
Sequences:
>Translated_944_residues MPPTVCQFCDKKGLPILPLRYAVARQDKGNAPVLKAPFSAIDKKKEQGKELSKFDLPADLAHYTTRLLRPGYLYVYDEAR KEWSAYVVTKGAYLFQFDPYAKVPPGGWGKVEFSCKREGDAFIARCVTVKNATKATKVWLGFSDVAWTKDVLDKHSSPAY REAHMRSIDIAAWRGGGSQSHVAPFSELASRVAEYAATPDMLNKETAAYVTALLPVPYKAPAQMLATDATTKRALAMSSS LIKDLLPAAVSAKSAEKGKVVSAAWAFSPQDFYADAIDAQAMVAWGTRTAKPYRPALVALDDPAGMALELNGLALQRSAE FSENPQRKWKHDTALLIGALKEAVGHGAVEDDIRSNQSAADIAEGMANIEGGDQTTDALTLMTQGYGAYKRRLAERERAR TEERERIRDASEAKSGMLGDEAWKKYTSYYDKSRVEQELADYQTKLTDFSNQTLAKLDVPYLAWLRSGAFSSYLSHNFDS KDLDSGASYTALITQIIHNASGRTTLFDFFTECLKLDPKLPEAWLLRAGAFNNDMLIKGWLSKVAENGGKSDFPLADLAE KFHDKFKDVMVAGGKGELKAKYLDCIARFVYQYSGPLVKLITDEIDKVTTLAVGSLRVRWQMGLLGCVAREGNPNLKLVD LRGMQSFSDATKALAKMLAAMGGGDEKRLRESVRPSLRRNMNTSEKFPFRGVALVDAAKVATLPGATEELKQGMAGALQI QDFGEIMRGTVRKLGNLEVKVGVVQAILSSVTLANSYKEMKKAGADKIADKTVNFVGGVAGLVGGITETTGNMLEKTAWG ATKTSWQFKFQAIQIESRASWMTGLGKILGVVGGVVGGVFAVKDSYEMRERHPVFAIAMLTLGTFSIAASFLLLFSAMAG VGFILGVVIAIIIFVVALFKPNALQDWLSDTVYGFREKSGGRKFQFKGLADQQLSLESMSKGEG >Mature_943_residues PPTVCQFCDKKGLPILPLRYAVARQDKGNAPVLKAPFSAIDKKKEQGKELSKFDLPADLAHYTTRLLRPGYLYVYDEARK EWSAYVVTKGAYLFQFDPYAKVPPGGWGKVEFSCKREGDAFIARCVTVKNATKATKVWLGFSDVAWTKDVLDKHSSPAYR EAHMRSIDIAAWRGGGSQSHVAPFSELASRVAEYAATPDMLNKETAAYVTALLPVPYKAPAQMLATDATTKRALAMSSSL IKDLLPAAVSAKSAEKGKVVSAAWAFSPQDFYADAIDAQAMVAWGTRTAKPYRPALVALDDPAGMALELNGLALQRSAEF SENPQRKWKHDTALLIGALKEAVGHGAVEDDIRSNQSAADIAEGMANIEGGDQTTDALTLMTQGYGAYKRRLAERERART EERERIRDASEAKSGMLGDEAWKKYTSYYDKSRVEQELADYQTKLTDFSNQTLAKLDVPYLAWLRSGAFSSYLSHNFDSK DLDSGASYTALITQIIHNASGRTTLFDFFTECLKLDPKLPEAWLLRAGAFNNDMLIKGWLSKVAENGGKSDFPLADLAEK FHDKFKDVMVAGGKGELKAKYLDCIARFVYQYSGPLVKLITDEIDKVTTLAVGSLRVRWQMGLLGCVAREGNPNLKLVDL RGMQSFSDATKALAKMLAAMGGGDEKRLRESVRPSLRRNMNTSEKFPFRGVALVDAAKVATLPGATEELKQGMAGALQIQ DFGEIMRGTVRKLGNLEVKVGVVQAILSSVTLANSYKEMKKAGADKIADKTVNFVGGVAGLVGGITETTGNMLEKTAWGA TKTSWQFKFQAIQIESRASWMTGLGKILGVVGGVVGGVFAVKDSYEMRERHPVFAIAMLTLGTFSIAASFLLLFSAMAGV GFILGVVIAIIIFVVALFKPNALQDWLSDTVYGFREKSGGRKFQFKGLADQQLSLESMSKGEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 103057; Mature: 102926
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPTVCQFCDKKGLPILPLRYAVARQDKGNAPVLKAPFSAIDKKKEQGKELSKFDLPADL CCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEECCHHHHHHHHHHCCCHHHCCCCHHH AHYTTRLLRPGYLYVYDEARKEWSAYVVTKGAYLFQFDPYAKVPPGGWGKVEFSCKREGD HHHHHHHCCCCEEEEEEHHHHCCCEEEEECCEEEEEECCCCCCCCCCCCEEEEEECCCCC AFIARCVTVKNATKATKVWLGFSDVAWTKDVLDKHSSPAYREAHMRSIDIAAWRGGGSQS HHHHHHHHHCCCCCHHEEEECCCHHHHHHHHHHCCCCCHHHHHHHCEEEEEEECCCCCCC HVAPFSELASRVAEYAATPDMLNKETAAYVTALLPVPYKAPAQMLATDATTKRALAMSSS CCCCHHHHHHHHHHHHCCCHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH LIKDLLPAAVSAKSAEKGKVVSAAWAFSPQDFYADAIDAQAMVAWGTRTAKPYRPALVAL HHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCHHHEEECCCCCCCCCCEEEEE DDPAGMALELNGLALQRSAEFSENPQRKWKHDTALLIGALKEAVGHGAVEDDIRSNQSAA ECCCCCEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHH DIAEGMANIEGGDQTTDALTLMTQGYGAYKRRLAERERARTEERERIRDASEAKSGMLGD HHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH EAWKKYTSYYDKSRVEQELADYQTKLTDFSNQTLAKLDVPYLAWLRSGAFSSYLSHNFDS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCC KDLDSGASYTALITQIIHNASGRTTLFDFFTECLKLDPKLPEAWLLRAGAFNNDMLIKGW CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHH LSKVAENGGKSDFPLADLAEKFHDKFKDVMVAGGKGELKAKYLDCIARFVYQYSGPLVKL HHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCEEHH ITDEIDKVTTLAVGSLRVRWQMGLLGCVAREGNPNLKLVDLRGMQSFSDATKALAKMLAA HHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH MGGGDEKRLRESVRPSLRRNMNTSEKFPFRGVALVDAAKVATLPGATEELKQGMAGALQI HCCCCHHHHHHHHCHHHHHCCCCCCCCCCCCEEHHHHHHHHCCCCCHHHHHCCHHCEEEH QDFGEIMRGTVRKLGNLEVKVGVVQAILSSVTLANSYKEMKKAGADKIADKTVNFVGGVA HHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH GLVGGITETTGNMLEKTAWGATKTSWQFKFQAIQIESRASWMTGLGKILGVVGGVVGGVF HHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH AVKDSYEMRERHPVFAIAMLTLGTFSIAASFLLLFSAMAGVGFILGVVIAIIIFVVALFK HCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PNALQDWLSDTVYGFREKSGGRKFQFKGLADQQLSLESMSKGEG CCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCC >Mature Secondary Structure PPTVCQFCDKKGLPILPLRYAVARQDKGNAPVLKAPFSAIDKKKEQGKELSKFDLPADL CCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEECCHHHHHHHHHHCCCHHHCCCCHHH AHYTTRLLRPGYLYVYDEARKEWSAYVVTKGAYLFQFDPYAKVPPGGWGKVEFSCKREGD HHHHHHHCCCCEEEEEEHHHHCCCEEEEECCEEEEEECCCCCCCCCCCCEEEEEECCCCC AFIARCVTVKNATKATKVWLGFSDVAWTKDVLDKHSSPAYREAHMRSIDIAAWRGGGSQS HHHHHHHHHCCCCCHHEEEECCCHHHHHHHHHHCCCCCHHHHHHHCEEEEEEECCCCCCC HVAPFSELASRVAEYAATPDMLNKETAAYVTALLPVPYKAPAQMLATDATTKRALAMSSS CCCCHHHHHHHHHHHHCCCHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH LIKDLLPAAVSAKSAEKGKVVSAAWAFSPQDFYADAIDAQAMVAWGTRTAKPYRPALVAL HHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCHHHEEECCCCCCCCCCEEEEE DDPAGMALELNGLALQRSAEFSENPQRKWKHDTALLIGALKEAVGHGAVEDDIRSNQSAA ECCCCCEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHH DIAEGMANIEGGDQTTDALTLMTQGYGAYKRRLAERERARTEERERIRDASEAKSGMLGD HHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH EAWKKYTSYYDKSRVEQELADYQTKLTDFSNQTLAKLDVPYLAWLRSGAFSSYLSHNFDS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCC KDLDSGASYTALITQIIHNASGRTTLFDFFTECLKLDPKLPEAWLLRAGAFNNDMLIKGW CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHH LSKVAENGGKSDFPLADLAEKFHDKFKDVMVAGGKGELKAKYLDCIARFVYQYSGPLVKL HHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCEEHH ITDEIDKVTTLAVGSLRVRWQMGLLGCVAREGNPNLKLVDLRGMQSFSDATKALAKMLAA HHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH MGGGDEKRLRESVRPSLRRNMNTSEKFPFRGVALVDAAKVATLPGATEELKQGMAGALQI HCCCCHHHHHHHHCHHHHHCCCCCCCCCCCCEEHHHHHHHHCCCCCHHHHHCCHHCEEEH QDFGEIMRGTVRKLGNLEVKVGVVQAILSSVTLANSYKEMKKAGADKIADKTVNFVGGVA HHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH GLVGGITETTGNMLEKTAWGATKTSWQFKFQAIQIESRASWMTGLGKILGVVGGVVGGVF HHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH AVKDSYEMRERHPVFAIAMLTLGTFSIAASFLLLFSAMAGVGFILGVVIAIIIFVVALFK HCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PNALQDWLSDTVYGFREKSGGRKFQFKGLADQQLSLESMSKGEG CCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA