Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53719467

Identifier: 53719467

GI number: 53719467

Start: 2209149

End: 2209394

Strand: Reverse

Name: 53719467

Synonym: BPSL1854

Alternate gene names: NA

Gene position: 2209394-2209149 (Counterclockwise)

Preceding gene: 53719468

Following gene: 53719466

Centisome position: 54.22

GC content: 60.98

Gene sequence:

>246_bases
ATGGACGAAAGTGCTACGATGGAACGAAACCGACGGCGGAGGCGGGCCATGTTTCCTACCCTGAGTCCCGAAGCGATCGA
AGCGCTGAAATGGATCGACCAGTTCGGCTCCGGCCGCCCGTTGCCGGTGGGTTTCCGGTTGGCGCTCGAGGAGCTCCTGA
ACGACGGTTTCGTCTATCAGAGCGGCCCGGACCGGGTCGATATCACAGACGACGGCAAGGCTTACCTGTCTGAGGCGTAC
GATTGA

Upstream 100 bases:

>100_bases
TATCGATCGCCCGCCTCTGAGCGGGCGCCGCCGCGCCCCCCGTGCCCGGCCCGTGCGGACGGCGCCTTGCGCCCGCGCGC
GCTTTGCCGTTGTTCCGCGC

Downstream 100 bases:

>100_bases
CGGGGGCGGCGGACGCCGGGCGAGGCTCGCCGCGCCGACGCCGGCACGACCGCCCGGATCGGGAGGCGACGAAATGGAAC
CGAAAGGCAGGGACATCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MDESATMERNRRRRRAMFPTLSPEAIEALKWIDQFGSGRPLPVGFRLALEELLNDGFVYQSGPDRVDITDDGKAYLSEAY
D

Sequences:

>Translated_81_residues
MDESATMERNRRRRRAMFPTLSPEAIEALKWIDQFGSGRPLPVGFRLALEELLNDGFVYQSGPDRVDITDDGKAYLSEAY
D
>Mature_81_residues
MDESATMERNRRRRRAMFPTLSPEAIEALKWIDQFGSGRPLPVGFRLALEELLNDGFVYQSGPDRVDITDDGKAYLSEAY
D

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9253; Mature: 9253

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDESATMERNRRRRRAMFPTLSPEAIEALKWIDQFGSGRPLPVGFRLALEELLNDGFVYQ
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEC
SGPDRVDITDDGKAYLSEAYD
CCCCEEEECCCCHHHHHHCCC
>Mature Secondary Structure
MDESATMERNRRRRRAMFPTLSPEAIEALKWIDQFGSGRPLPVGFRLALEELLNDGFVYQ
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEC
SGPDRVDITDDGKAYLSEAYD
CCCCEEEECCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA