| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719456
Identifier: 53719456
GI number: 53719456
Start: 2196592
End: 2197083
Strand: Reverse
Name: 53719456
Synonym: BPSL1843
Alternate gene names: NA
Gene position: 2197083-2196592 (Counterclockwise)
Preceding gene: 53719459
Following gene: 53719452
Centisome position: 53.92
GC content: 63.62
Gene sequence:
>492_bases ATGGCTAGCTACAAGAAGATTCTGCTGTGCTACGACGGCACGCTCGAAGGCCGAAAGGCGCTGCGATGCGGTGCCGACCT GGCGCTCGAACTGAAAGCGGAGACGCATCTGCTGTCGGTCGTCGACATGCGTTCGAGCATTGCGCAAAGCGCGGGCCTGT TGACCGACGTCGCGTGCAGCCGCTTCGAGGAAACCGCGCGGGAGATCCTGCAGGAGGGCGTCAACTGGCTGACCGAGCGC GGCGTGCACGCACAGGGGCATTTTGCGTTCGGCTACCCGATCGACGAGATCGCGAATCTTGCGACGAAGCTGAACGTCGA TCTCGTCGTGGTCGGCCATCGTTGCCGCAGCGGCTTGTCGCGCTGGTGGATGGGGGCCGGCAATACGCAATTGCTCGACC GGGTGTCGTGCAGCATTCTGGTGGCGTGTGCTTCGCCGGCCGAACAGAAAGCGGAAAGCGCGAAAGAGGGGGCCGCGACG ATCGGACACTGA
Upstream 100 bases:
>100_bases TTCGCGGTGCAACGCGAATCAGCGTTTTCCAGCGCTTGCATCCTGAATTGCGGCGCAGCATGATGAATCCATGCGCGAGG CGCGCATTGGGGAGGCCGCA
Downstream 100 bases:
>100_bases CGGGCCGCCGGTTCGGCGACGCGCCGCCGGGCAAAACGGCGAGTGGGCGACGCTGCCGCCCGGCCGCGGCGGACCTATGC GGCGCGCTCGTCGACGACCG
Product: putative stress-like protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Family Protein; Universal Stress Protein; Universal Stress Protein Family
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MASYKKILLCYDGTLEGRKALRCGADLALELKAETHLLSVVDMRSSIAQSAGLLTDVACSRFEETAREILQEGVNWLTER GVHAQGHFAFGYPIDEIANLATKLNVDLVVVGHRCRSGLSRWWMGAGNTQLLDRVSCSILVACASPAEQKAESAKEGAAT IGH
Sequences:
>Translated_163_residues MASYKKILLCYDGTLEGRKALRCGADLALELKAETHLLSVVDMRSSIAQSAGLLTDVACSRFEETAREILQEGVNWLTER GVHAQGHFAFGYPIDEIANLATKLNVDLVVVGHRCRSGLSRWWMGAGNTQLLDRVSCSILVACASPAEQKAESAKEGAAT IGH >Mature_162_residues ASYKKILLCYDGTLEGRKALRCGADLALELKAETHLLSVVDMRSSIAQSAGLLTDVACSRFEETAREILQEGVNWLTERG VHAQGHFAFGYPIDEIANLATKLNVDLVVVGHRCRSGLSRWWMGAGNTQLLDRVSCSILVACASPAEQKAESAKEGAATI GH
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17602; Mature: 17471
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASYKKILLCYDGTLEGRKALRCGADLALELKAETHLLSVVDMRSSIAQSAGLLTDVACS CCCCEEEEEEECCCCCCHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHH RFEETAREILQEGVNWLTERGVHAQGHFAFGYPIDEIANLATKLNVDLVVVGHRCRSGLS HHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCEEEEECHHHHHHHH RWWMGAGNTQLLDRVSCSILVACASPAEQKAESAKEGAATIGH HHHCCCCCHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure ASYKKILLCYDGTLEGRKALRCGADLALELKAETHLLSVVDMRSSIAQSAGLLTDVACS CCCEEEEEEECCCCCCHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHH RFEETAREILQEGVNWLTERGVHAQGHFAFGYPIDEIANLATKLNVDLVVVGHRCRSGLS HHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCEEEEECHHHHHHHH RWWMGAGNTQLLDRVSCSILVACASPAEQKAESAKEGAATIGH HHHCCCCCHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA