| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is purR [H]
Identifier: 53719444
GI number: 53719444
Start: 2183735
End: 2184766
Strand: Reverse
Name: purR [H]
Synonym: BPSL1831
Alternate gene names: 53719444
Gene position: 2184766-2183735 (Counterclockwise)
Preceding gene: 53719445
Following gene: 53719443
Centisome position: 53.62
GC content: 70.06
Gene sequence:
>1032_bases ATGGCGACGATCAAGGATGTGGCGGCCATCGCCGGCGTATCGTTCACGACGGTATCGCACGTGGTCAACAACTCGCGGCC CGTGTCGGCCGACGTGCGGGCGAAGGTGGAGCGGGCGATCCGCGAGCTCAACTACGTGCCGTCGGCCGTCGCGCGCTCGC TGAAGGCGCGCTCGACGGCCACCATCGGCCTCGTGGTGCCGAACAGCACGAACCCGTATTTCGCCGAGCTCGCGCGCGGC ATCGAAGACCAGTGCGCGCTGTCCGGCTACTGCGTGTTCCTGTGCAATTCGGACGACGATCCCGAGAAGCAGCGCAACTA CCTGCGCGTGCTGCAGGAAAAGCGCATCGACGGGCTCATCATCGCGTCGGCGGGCGACGACGCGGTGCTCGCGCAGACGC TCGCCGACACGCGCGAGCCGCTCGTCGTCGTCGACCGCAACATCGAGGGGCTCCCGGCCGATCTCGTGCAGATCGACCAC GAGCGCGGCGCGTATCTCGCCACGCGCCACCTGCTCGAACTCGGCCACGCGAAGATCGGCTGCATCACGGGCGCCGTGTC GACCGCGGTGAGCGCGATGCGCGTGCACGGCTTCATCCGCGCGATGGCCGAACGCGGGATCGACATCGTGCCGGGCGCGA TCGCCGAAAGCGACTTTTCGTGCATGGGCGGCTATCACGCAGCCGTGCGCCTGTTCGACAGCGTGCGCCCGAGCGCGATC TTCGCCGGCAACGATCTGATGGGGCTCGGCGCGCTGCGCGCGGCCGCCGAGCGCGGCATCCGCGTGCCCGCCGACTGCTC GATCATCGGCTTCGACGACATCGAGCTGTCGCGCTACACGTATCCGGCGCTGTCGACGGTCGGGCAATCGGTGCGCGCGC TGGGCGAGATGGCCGCGCAGACGCTGATCGAGCGGATCGGCGGCGGCGCGTCGGGCGCGCCGCAGCGCCGCCGCGTCGTG TCGCCGCGCCTCGTGCTGCGCGAATCGACGACTGTCTACGTGGAGCCGGCCGACGCCGGGTATCGCGGATGA
Upstream 100 bases:
>100_bases TCATCACCGGCGCCGTGATCGTCGTGGCCGTCGTGCTCGACACGTATCGCAGCCGGCGCGCGCGGGGATAGCAAAGAACA ACGAACCAGAGAGAAACGGA
Downstream 100 bases:
>100_bases CGGCCGCCGTCGAACGCGCGGCCGGCGGGGCCTCGCCCGCGCGCGCCGGCAGGGTGATGGTGGTCGGCAGCCTGAACATG GACCTCGTCGTGCGCTCGGC
Product: putative ribose operon repressor
Products: NA
Alternate protein names: Pur regulon repressor; Purine nucleotide synthesis repressor [H]
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MATIKDVAAIAGVSFTTVSHVVNNSRPVSADVRAKVERAIRELNYVPSAVARSLKARSTATIGLVVPNSTNPYFAELARG IEDQCALSGYCVFLCNSDDDPEKQRNYLRVLQEKRIDGLIIASAGDDAVLAQTLADTREPLVVVDRNIEGLPADLVQIDH ERGAYLATRHLLELGHAKIGCITGAVSTAVSAMRVHGFIRAMAERGIDIVPGAIAESDFSCMGGYHAAVRLFDSVRPSAI FAGNDLMGLGALRAAAERGIRVPADCSIIGFDDIELSRYTYPALSTVGQSVRALGEMAAQTLIERIGGGASGAPQRRRVV SPRLVLRESTTVYVEPADAGYRG
Sequences:
>Translated_343_residues MATIKDVAAIAGVSFTTVSHVVNNSRPVSADVRAKVERAIRELNYVPSAVARSLKARSTATIGLVVPNSTNPYFAELARG IEDQCALSGYCVFLCNSDDDPEKQRNYLRVLQEKRIDGLIIASAGDDAVLAQTLADTREPLVVVDRNIEGLPADLVQIDH ERGAYLATRHLLELGHAKIGCITGAVSTAVSAMRVHGFIRAMAERGIDIVPGAIAESDFSCMGGYHAAVRLFDSVRPSAI FAGNDLMGLGALRAAAERGIRVPADCSIIGFDDIELSRYTYPALSTVGQSVRALGEMAAQTLIERIGGGASGAPQRRRVV SPRLVLRESTTVYVEPADAGYRG >Mature_342_residues ATIKDVAAIAGVSFTTVSHVVNNSRPVSADVRAKVERAIRELNYVPSAVARSLKARSTATIGLVVPNSTNPYFAELARGI EDQCALSGYCVFLCNSDDDPEKQRNYLRVLQEKRIDGLIIASAGDDAVLAQTLADTREPLVVVDRNIEGLPADLVQIDHE RGAYLATRHLLELGHAKIGCITGAVSTAVSAMRVHGFIRAMAERGIDIVPGAIAESDFSCMGGYHAAVRLFDSVRPSAIF AGNDLMGLGALRAAAERGIRVPADCSIIGFDDIELSRYTYPALSTVGQSVRALGEMAAQTLIERIGGGASGAPQRRRVVS PRLVLRESTTVYVEPADAGYRG
Specific function: Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepre
COG id: COG1609
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1790194, Length=338, Percent_Identity=40.5325443786982, Blast_Score=246, Evalue=2e-66, Organism=Escherichia coli, GI1787948, Length=332, Percent_Identity=42.4698795180723, Blast_Score=239, Evalue=2e-64, Organism=Escherichia coli, GI1790369, Length=332, Percent_Identity=34.0361445783133, Blast_Score=194, Evalue=6e-51, Organism=Escherichia coli, GI1788474, Length=333, Percent_Identity=36.9369369369369, Blast_Score=179, Evalue=2e-46, Organism=Escherichia coli, GI1789202, Length=334, Percent_Identity=34.4311377245509, Blast_Score=164, Evalue=7e-42, Organism=Escherichia coli, GI1786540, Length=331, Percent_Identity=32.9305135951662, Blast_Score=159, Evalue=3e-40, Organism=Escherichia coli, GI1789068, Length=338, Percent_Identity=31.9526627218935, Blast_Score=156, Evalue=2e-39, Organism=Escherichia coli, GI1787580, Length=328, Percent_Identity=31.4024390243902, Blast_Score=138, Evalue=6e-34, Organism=Escherichia coli, GI48994940, Length=310, Percent_Identity=27.0967741935484, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1790715, Length=316, Percent_Identity=25, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1787906, Length=323, Percent_Identity=26.9349845201238, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1786268, Length=306, Percent_Identity=28.1045751633987, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1789456, Length=320, Percent_Identity=27.8125, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1790689, Length=315, Percent_Identity=24.7619047619048, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1790192, Length=244, Percent_Identity=28.2786885245902, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 36565; Mature: 36434
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIKDVAAIAGVSFTTVSHVVNNSRPVSADVRAKVERAIRELNYVPSAVARSLKARSTA CCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCE TIGLVVPNSTNPYFAELARGIEDQCALSGYCVFLCNSDDDPEKQRNYLRVLQEKRIDGLI EEEEEECCCCCHHHHHHHCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEE IASAGDDAVLAQTLADTREPLVVVDRNIEGLPADLVQIDHERGAYLATRHLLELGHAKIG EECCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCHHH CITGAVSTAVSAMRVHGFIRAMAERGIDIVPGAIAESDFSCMGGYHAAVRLFDSVRPSAI HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHCHHHHHHHHHHHCCCCEE FAGNDLMGLGALRAAAERGIRVPADCSIIGFDDIELSRYTYPALSTVGQSVRALGEMAAQ EECCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHH TLIERIGGGASGAPQRRRVVSPRLVLRESTTVYVEPADAGYRG HHHHHHCCCCCCCCHHHHHCCCCEEEECCCEEEEECCCCCCCC >Mature Secondary Structure ATIKDVAAIAGVSFTTVSHVVNNSRPVSADVRAKVERAIRELNYVPSAVARSLKARSTA CCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCE TIGLVVPNSTNPYFAELARGIEDQCALSGYCVFLCNSDDDPEKQRNYLRVLQEKRIDGLI EEEEEECCCCCHHHHHHHCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEE IASAGDDAVLAQTLADTREPLVVVDRNIEGLPADLVQIDHERGAYLATRHLLELGHAKIG EECCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCHHH CITGAVSTAVSAMRVHGFIRAMAERGIDIVPGAIAESDFSCMGGYHAAVRLFDSVRPSAI HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHCHHHHHHHHHHHCCCCEE FAGNDLMGLGALRAAAERGIRVPADCSIIGFDDIELSRYTYPALSTVGQSVRALGEMAAQ EECCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHH TLIERIGGGASGAPQRRRVVSPRLVLRESTTVYVEPADAGYRG HHHHHHCCCCCCCCHHHHHCCCCEEEECCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA