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The map label for this gene is tcp [H]

Identifier: 53719442

GI number: 53719442

Start: 2180671

End: 2182575

Strand: Reverse

Name: tcp [H]

Synonym: BPSL1829

Alternate gene names: 53719442

Gene position: 2182575-2180671 (Counterclockwise)

Preceding gene: 53719443

Following gene: 53719441

Centisome position: 53.57

GC content: 71.29

Gene sequence:

>1905_bases
TTGCGACGCCTCACAGGAAGAACCATGCTGCTGAAGAACATCACGATCCGAGCGCGCCTCGCCGTCACGATGGCGCTCCT
TTCCGTCCTGCTGTGCGCCGTCGGTGCGCTCGGCCTCTTCGGCATGAGCCGGGCCAACGACGCGAACGAGCAAACGTCGT
CGAATCAACTGCCGAGCGCGATCGACGTGGCGAGCGCGGAGTTGTTCGCCGCCCGAGAGCGCCTCGTGCTCGATCGCGCG
GCGCTCCTCGCGGGCACGCCGGACGTCGCGCCGACGATCGAGCGCGCGCGCCAGATGCGCGGAGTCTCCGATTCGTGGTG
GAAAAAATACCTCGACCTGCCGCGCGACGCGCAGGAGGATCGCCTCGCGCAGGACCTCGCGTCGAAACGGCAGATTCTGC
AGCGTGAGCTCGACGCGGCCGCCGCGTTGATCAACGCGAACGATCGCGACAGAATCCTCGAATCCGCCAAGCGGATGCAG
AACGTATTCAACGATTTCTCGCTGGCGAGCGAGGCGCTGCGCGCGTTTCAGCTCAAGCAGGCGAGCGTCAACTTCAGCGA
TGCGCAAAGCGTATACGCGGCGAGCCGGGTCGCCAGCATCGCCGCGCTCGCGCTCGGCCTCGCGCTCTCGCTGTACTGCT
TCCTGAGCCTGCGCGCGGCGATCGCCCGGCCGCTCGCCGACGCGCTCGGTCATTTCGACGCGATCGCCGCGGGCGAGCTG
CGCCGCCCGATCGTCGTCGAACGGCGCGACGAGATGGGCCTGCTGCTCGAAGGGCTCGCGAAGATGCAGGCAAGCCTCGC
GGGCACCGTGCGCGCGGTGCGCGTCGGCAGCGAATCGATCGCGACGGCGGCCCGGCAGATCGCGGCGGGCAACATCGATC
TGTCCTCGCGCACCGAGGAGCAGGCGGCGGCGCTCGAACAGACGGCGTCGAGCATGGAGGAACTGACGGGCACGGTGCGG
CGCAACGCGGATAACGCGCGGCAGGCGAGCGCGCTCGCGGCGAGCGCGTCGGAGATCGCGAACAAGGGCAACGCGGTGGT
CGGCCAGGTGGTCGGCACGATGGGCGACATCAACCAGAGCTCCGCGAAGATCGCCGACATCATCACGATCATCGAGGGAA
TCGCGTTCCAGACCAACATCCTCGCGCTGAACGCGGCGGTCGAGGCGGCGCGCGCGGGCGAGGAAGGGCGCGGCTTCGCG
GTCGTCGCGGGCGAGGTGCGCAGCCTCGCGCAGCGTTCGTCGACGGCCGCCAAGGAGATCAAGGAGCTGATCGACACGTC
GGTCGAGCGCGTGCGCACGGGCTCCATGCTCGTCGACGACGCGGGACGCACGATGAGCGAGGTGATCGGCGCGGTGCGGC
GCGTGACCGACATCATGGGCGAGATCGCGGCGGCCTCGGACGAGCAGAGCACCGGCATCGACCAGGTGTCGCGCGCCGTA
TCGCAGATGGACGAGGTCACGCAGCAGAACGCGGCGCTCGTCGAGCAGGCCGCGGCGGCCGCGCAATCGCTCGACGAGCA
GGCCGCGCGGCTGCGCGCGACCGTTTCGGTGTTCCATGTCGATGACGGCGATGCGCGCGATGTCGCCTCGCGCCCGCCGG
CCCGGCCGGGGGCCGGCGCCGTGCACCGGGCGGCGGGCGCGGCCGCGCCGGCGCAGGCCGGCGCGTCTTCGGGCGCGCAC
GCCGCGCCGGCGGCGCATGCGGCGCGCAAGCCCGCGCCGTCCGCTGCGCTCGCGAAAGCCGCGCCTGTTGCGTCCGTTGC
ATCCGCTGCATCCGTTACGCCCGCTGCGCCTGCGCCGACGCTTGCCGCGGCAGCGGCGACGCCCAAACCCGCGCCCGCCG
CGCCGCGCGCCGGGTCGGTTACTGCGGCGTCCGCCGCGAGCGACGACGATTGGGAGACCTTCTAA

Upstream 100 bases:

>100_bases
GGCGGCTGCCCAAATCAAGTCTTCCTGTCGAGCGCCGTAAACCAAGCGTGGCGAAGCAAACGTTTCGCCGCCGCGGGCCG
GTCGAGCCGCCTCCGTCGCC

Downstream 100 bases:

>100_bases
GATGAATGGGAAAACGTATCGGACAACGATCTACCCCCAATTTGATTGAACGATGACGCCCGCGCCAGCGGGCGTTTTTG
CATCGGGACCAGTCGCTCGC

Product: putative methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Citrate chemoreceptor protein [H]

Number of amino acids: Translated: 634; Mature: 634

Protein sequence:

>634_residues
MRRLTGRTMLLKNITIRARLAVTMALLSVLLCAVGALGLFGMSRANDANEQTSSNQLPSAIDVASAELFAARERLVLDRA
ALLAGTPDVAPTIERARQMRGVSDSWWKKYLDLPRDAQEDRLAQDLASKRQILQRELDAAAALINANDRDRILESAKRMQ
NVFNDFSLASEALRAFQLKQASVNFSDAQSVYAASRVASIAALALGLALSLYCFLSLRAAIARPLADALGHFDAIAAGEL
RRPIVVERRDEMGLLLEGLAKMQASLAGTVRAVRVGSESIATAARQIAAGNIDLSSRTEEQAAALEQTASSMEELTGTVR
RNADNARQASALAASASEIANKGNAVVGQVVGTMGDINQSSAKIADIITIIEGIAFQTNILALNAAVEAARAGEEGRGFA
VVAGEVRSLAQRSSTAAKEIKELIDTSVERVRTGSMLVDDAGRTMSEVIGAVRRVTDIMGEIAAASDEQSTGIDQVSRAV
SQMDEVTQQNAALVEQAAAAAQSLDEQAARLRATVSVFHVDDGDARDVASRPPARPGAGAVHRAAGAAAPAQAGASSGAH
AAPAAHAARKPAPSAALAKAAPVASVASAASVTPAAPAPTLAAAAATPKPAPAAPRAGSVTAASAASDDDWETF

Sequences:

>Translated_634_residues
MRRLTGRTMLLKNITIRARLAVTMALLSVLLCAVGALGLFGMSRANDANEQTSSNQLPSAIDVASAELFAARERLVLDRA
ALLAGTPDVAPTIERARQMRGVSDSWWKKYLDLPRDAQEDRLAQDLASKRQILQRELDAAAALINANDRDRILESAKRMQ
NVFNDFSLASEALRAFQLKQASVNFSDAQSVYAASRVASIAALALGLALSLYCFLSLRAAIARPLADALGHFDAIAAGEL
RRPIVVERRDEMGLLLEGLAKMQASLAGTVRAVRVGSESIATAARQIAAGNIDLSSRTEEQAAALEQTASSMEELTGTVR
RNADNARQASALAASASEIANKGNAVVGQVVGTMGDINQSSAKIADIITIIEGIAFQTNILALNAAVEAARAGEEGRGFA
VVAGEVRSLAQRSSTAAKEIKELIDTSVERVRTGSMLVDDAGRTMSEVIGAVRRVTDIMGEIAAASDEQSTGIDQVSRAV
SQMDEVTQQNAALVEQAAAAAQSLDEQAARLRATVSVFHVDDGDARDVASRPPARPGAGAVHRAAGAAAPAQAGASSGAH
AAPAAHAARKPAPSAALAKAAPVASVASAASVTPAAPAPTLAAAAATPKPAPAAPRAGSVTAASAASDDDWETF
>Mature_634_residues
MRRLTGRTMLLKNITIRARLAVTMALLSVLLCAVGALGLFGMSRANDANEQTSSNQLPSAIDVASAELFAARERLVLDRA
ALLAGTPDVAPTIERARQMRGVSDSWWKKYLDLPRDAQEDRLAQDLASKRQILQRELDAAAALINANDRDRILESAKRMQ
NVFNDFSLASEALRAFQLKQASVNFSDAQSVYAASRVASIAALALGLALSLYCFLSLRAAIARPLADALGHFDAIAAGEL
RRPIVVERRDEMGLLLEGLAKMQASLAGTVRAVRVGSESIATAARQIAAGNIDLSSRTEEQAAALEQTASSMEELTGTVR
RNADNARQASALAASASEIANKGNAVVGQVVGTMGDINQSSAKIADIITIIEGIAFQTNILALNAAVEAARAGEEGRGFA
VVAGEVRSLAQRSSTAAKEIKELIDTSVERVRTGSMLVDDAGRTMSEVIGAVRRVTDIMGEIAAASDEQSTGIDQVSRAV
SQMDEVTQQNAALVEQAAAAAQSLDEQAARLRATVSVFHVDDGDARDVASRPPARPGAGAVHRAAGAAAPAQAGASSGAH
AAPAAHAARKPAPSAALAKAAPVASVASAASVTPAAPAPTLAAAAATPKPAPAAPRAGSVTAASAASDDDWETF

Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=331, Percent_Identity=59.5166163141994, Blast_Score=342, Evalue=4e-95,
Organism=Escherichia coli, GI2367378, Length=522, Percent_Identity=45.2107279693487, Blast_Score=339, Evalue=4e-94,
Organism=Escherichia coli, GI1788194, Length=523, Percent_Identity=42.4474187380497, Blast_Score=335, Evalue=4e-93,
Organism=Escherichia coli, GI1787690, Length=319, Percent_Identity=58.6206896551724, Blast_Score=320, Evalue=2e-88,
Organism=Escherichia coli, GI1789453, Length=328, Percent_Identity=37.1951219512195, Blast_Score=213, Evalue=4e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 65637; Mature: 65637

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLTGRTMLLKNITIRARLAVTMALLSVLLCAVGALGLFGMSRANDANEQTSSNQLPSA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
IDVASAELFAARERLVLDRAALLAGTPDVAPTIERARQMRGVSDSWWKKYLDLPRDAQED
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHH
RLAQDLASKRQILQRELDAAAALINANDRDRILESAKRMQNVFNDFSLASEALRAFQLKQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASVNFSDAQSVYAASRVASIAALALGLALSLYCFLSLRAAIARPLADALGHFDAIAAGEL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RRPIVVERRDEMGLLLEGLAKMQASLAGTVRAVRVGSESIATAARQIAAGNIDLSSRTEE
CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHH
QAAALEQTASSMEELTGTVRRNADNARQASALAASASEIANKGNAVVGQVVGTMGDINQS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCH
SAKIADIITIIEGIAFQTNILALNAAVEAARAGEEGRGFAVVAGEVRSLAQRSSTAAKEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHH
KELIDTSVERVRTGSMLVDDAGRTMSEVIGAVRRVTDIMGEIAAASDEQSTGIDQVSRAV
HHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
SQMDEVTQQNAALVEQAAAAAQSLDEQAARLRATVSVFHVDDGDARDVASRPPARPGAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHCCCCCCCCCCCH
VHRAAGAAAPAQAGASSGAHAAPAAHAARKPAPSAALAKAAPVASVASAASVTPAAPAPT
HHHHHCCCCCHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH
LAAAAATPKPAPAAPRAGSVTAASAASDDDWETF
HHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure
MRRLTGRTMLLKNITIRARLAVTMALLSVLLCAVGALGLFGMSRANDANEQTSSNQLPSA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
IDVASAELFAARERLVLDRAALLAGTPDVAPTIERARQMRGVSDSWWKKYLDLPRDAQED
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHH
RLAQDLASKRQILQRELDAAAALINANDRDRILESAKRMQNVFNDFSLASEALRAFQLKQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASVNFSDAQSVYAASRVASIAALALGLALSLYCFLSLRAAIARPLADALGHFDAIAAGEL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RRPIVVERRDEMGLLLEGLAKMQASLAGTVRAVRVGSESIATAARQIAAGNIDLSSRTEE
CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHH
QAAALEQTASSMEELTGTVRRNADNARQASALAASASEIANKGNAVVGQVVGTMGDINQS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCH
SAKIADIITIIEGIAFQTNILALNAAVEAARAGEEGRGFAVVAGEVRSLAQRSSTAAKEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHH
KELIDTSVERVRTGSMLVDDAGRTMSEVIGAVRRVTDIMGEIAAASDEQSTGIDQVSRAV
HHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
SQMDEVTQQNAALVEQAAAAAQSLDEQAARLRATVSVFHVDDGDARDVASRPPARPGAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHCCCCCCCCCCCH
VHRAAGAAAPAQAGASSGAHAAPAAHAARKPAPSAALAKAAPVASVASAASVTPAAPAPT
HHHHHCCCCCHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH
LAAAAATPKPAPAAPRAGSVTAASAASDDDWETF
HHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8419927; 11677609 [H]