| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is 53719430
Identifier: 53719430
GI number: 53719430
Start: 2165065
End: 2165478
Strand: Reverse
Name: 53719430
Synonym: BPSL1817
Alternate gene names: NA
Gene position: 2165478-2165065 (Counterclockwise)
Preceding gene: 53719431
Following gene: 53719429
Centisome position: 53.15
GC content: 77.29
Gene sequence:
>414_bases ATGGCGATTCGACCGGAACACACCACGCGCCGGCGCGCGTCGCGCGCGGTGGCCGCGTGCGCGGCGCTCGCGGCGCTCGC CGGCTGCATGTCCGGCCACCCGCCGTACGGGATGCCCGATGCGTCGACGATCGGCTACGACGCGCGCACGGGCCTTGCGC GCGCGCCGGACTGCGCGGCGCTCGAGCAGCGCTCGCAGATGATCGACGCGGGCCGCGCGCGGCCCGGCGTGAGCTTCGGC TGCGCGACCTACGGCAACCTCGCGGCGATGCTCGCGCGGCCCGCCGATCTCGTCGCGCCGCTGCCGTACGCGGGCGCGGA CGCGGCGCTCGGCGCGAGCGCGGTGCGCCGCTACGACGAAGGCCGCGCGACGCCGCTGAACCCGACGTCGACGACGACGT CCGTCACGCACTAG
Upstream 100 bases:
>100_bases GCTCGGCATCGATCCGCTCGGCGGCGATGCGCCGCGGCTCGCGGGCCCGGCGGGGTTCGTCTACTGACGACGGAAGACAA GAGGGACACGGAGGCATTCG
Downstream 100 bases:
>100_bases CGGGGGCGAAATGGGCGCATTCGACCGGGTGGGCGGCGCGCGGCCCGTGAAGGAACTGCGCGACGCGGCGGGCGGCGCGC GCCTCGTCGCGATCGTCGCC
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MAIRPEHTTRRRASRAVAACAALAALAGCMSGHPPYGMPDASTIGYDARTGLARAPDCAALEQRSQMIDAGRARPGVSFG CATYGNLAAMLARPADLVAPLPYAGADAALGASAVRRYDEGRATPLNPTSTTTSVTH
Sequences:
>Translated_137_residues MAIRPEHTTRRRASRAVAACAALAALAGCMSGHPPYGMPDASTIGYDARTGLARAPDCAALEQRSQMIDAGRARPGVSFG CATYGNLAAMLARPADLVAPLPYAGADAALGASAVRRYDEGRATPLNPTSTTTSVTH >Mature_136_residues AIRPEHTTRRRASRAVAACAALAALAGCMSGHPPYGMPDASTIGYDARTGLARAPDCAALEQRSQMIDAGRARPGVSFGC ATYGNLAAMLARPADLVAPLPYAGADAALGASAVRRYDEGRATPLNPTSTTTSVTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14057; Mature: 13926
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRPEHTTRRRASRAVAACAALAALAGCMSGHPPYGMPDASTIGYDARTGLARAPDCAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LEQRSQMIDAGRARPGVSFGCATYGNLAAMLARPADLVAPLPYAGADAALGASAVRRYDE HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHC GRATPLNPTSTTTSVTH CCCCCCCCCCCCCCCCC >Mature Secondary Structure AIRPEHTTRRRASRAVAACAALAALAGCMSGHPPYGMPDASTIGYDARTGLARAPDCAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LEQRSQMIDAGRARPGVSFGCATYGNLAAMLARPADLVAPLPYAGADAALGASAVRRYDE HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHC GRATPLNPTSTTTSVTH CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA