| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719399
Identifier: 53719399
GI number: 53719399
Start: 2122834
End: 2123850
Strand: Reverse
Name: 53719399
Synonym: BPSL1785
Alternate gene names: NA
Gene position: 2123850-2122834 (Counterclockwise)
Preceding gene: 53719400
Following gene: 53719398
Centisome position: 52.12
GC content: 70.99
Gene sequence:
>1017_bases ATGACTCAGCTTTCGATGCCGGCCGCGGCGGCCTGCCCGACGCTCGGCGATCTGCGCGTCGAGCCTGGCCTGCCCACCGT CGTGTCGCCGCGCGACGGCGCGGACATCGCGCTTCACGAGGCCGCGCCGCTGCTGCGCGAGATCGCCGACGACGTCCTCG AGCGTGCGGGCGGCGTGCTTTTCACCGGCTTTCGCGTCGCGTCGATCGAGACCTTCCAGCGCTTCGCGGCCGATTTCGGC GATCCGCTGATCGGCTACGAGTTCGCGTCGACGCCGCGCAGCCAGGTCGAGGGCGCGGTCTACACGTCGACCGAATATCC GCCGCACCGCTCGATCCCGCTGCACAACGAGCAGTCGTACACGCGCGAGTGGCCGCTGCGGATCTGGTTCCACTGCGCGC TCGCCGCGCGCACGGGCGGCGCGACGCCGATCGCCGATAGCCGCGCCGTGTATCGCGCGCTCGATCCGGCGCTCGTCGCG CGCTTCGCCGAGCGCGAGCTCCTGTACGTGCGCAATTTCGGGCAAGGGCTCGATCTGCCTTGGCAGCAGGCGTTCGGCAC CGGCGATCCGCGCGAAGTCGAGCGCATCTGCGCGGCGCGCGGGATCGGCTGCGAATGGCGCGACGGCGACGACGGCGAGC CGCTTTTGCGCACCCGCGAGCGCTGCCAGGCGGTCGCGCGCCATCCGCGCACGGGCGAGCTCGTATGGTTCAACCAGGCG AACCTCTTTCACCTGTCGGCGCTCGACGAGGACATGCAGGAAGCGCTCGTCGACGCGGTCGGCATCGAGAACGTGCCGCG CAACGTCTATTACGGCGACGGCGCGCCGCTCGAGCCGGACGCGCTCGCCGAGATCCGCGCGGTGCTCGACGGCCAGCGGA TCGTGTTCCCGTGGCAGACGGGCGACGTGCTGATGCTCGACAACATGCTGAGCGCGCACGCGCGCGATCCGTTCGAGGGG CCGCGCAAGGTGGTGGTCGCGATGGCGCGAAGCTACCGCGAAAAGCGGGGCGCCTAG
Upstream 100 bases:
>100_bases GCGAGCCTGCGCCGCCATCTGGACGCGGCGCGCGCGTCGTGATGCGCCGCGCGCGCCGCTCGTTTCATCCACGCCGTTCG TACCGCAAGGGGATTTCCGG
Downstream 100 bases:
>100_bases CGGATTTGGCGGATGACGAAACGATGAACAACGAACGATGAACAACGAAACGGTGGCGGCGCTCGCGGCGCGCGCGTTGA GCGTCGGCTACCGGGATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: SyrP Protein; SyrP-Like Protein; Non-Ribosomal Peptide Synthetase; Regulatory Protein; Regulatory Protein B; Amino Acid Adenylation Domain Protein; Taurine Catabolism Dioxygenase TauD/TfdA Family; Amino Acid Adenylation Domain-Containing Protein; Pyoverdine Biosynthesis Regulatory Gene; Condensation Domain-Containing Protein; Taurine Catabolism Dioxygenase TauD TfdA Family; Taurine Catabolism Dioxygenase Taud/Tfda; SyrP-Like Regulatory Protein; NRPS-Like Protein; Peptide Synthase; Syringomycin Biosynthesis; Oxidoreductase; Clavaminic Acid Synthetase-Like Protein; Pyoverdine Biosynthesis Regulatory Gene SyrP-Like; Non Ribosomal Peptide Synthase Antibiotic Synthesis; Multi-Domain Non-Ribosomal Peptide Synthetase; Syrp Like Protein Albicidin Biosynthesis Regulation; Regulatory Protein SyrP-Like; Syringomycin Biosynthesis ; Pyoverdine Biosynthesis Regulatory Protein SyrP-Like; Syringomycin Synthesis Regulator SyrP
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MTQLSMPAAAACPTLGDLRVEPGLPTVVSPRDGADIALHEAAPLLREIADDVLERAGGVLFTGFRVASIETFQRFAADFG DPLIGYEFASTPRSQVEGAVYTSTEYPPHRSIPLHNEQSYTREWPLRIWFHCALAARTGGATPIADSRAVYRALDPALVA RFAERELLYVRNFGQGLDLPWQQAFGTGDPREVERICAARGIGCEWRDGDDGEPLLRTRERCQAVARHPRTGELVWFNQA NLFHLSALDEDMQEALVDAVGIENVPRNVYYGDGAPLEPDALAEIRAVLDGQRIVFPWQTGDVLMLDNMLSAHARDPFEG PRKVVVAMARSYREKRGA
Sequences:
>Translated_338_residues MTQLSMPAAAACPTLGDLRVEPGLPTVVSPRDGADIALHEAAPLLREIADDVLERAGGVLFTGFRVASIETFQRFAADFG DPLIGYEFASTPRSQVEGAVYTSTEYPPHRSIPLHNEQSYTREWPLRIWFHCALAARTGGATPIADSRAVYRALDPALVA RFAERELLYVRNFGQGLDLPWQQAFGTGDPREVERICAARGIGCEWRDGDDGEPLLRTRERCQAVARHPRTGELVWFNQA NLFHLSALDEDMQEALVDAVGIENVPRNVYYGDGAPLEPDALAEIRAVLDGQRIVFPWQTGDVLMLDNMLSAHARDPFEG PRKVVVAMARSYREKRGA >Mature_337_residues TQLSMPAAAACPTLGDLRVEPGLPTVVSPRDGADIALHEAAPLLREIADDVLERAGGVLFTGFRVASIETFQRFAADFGD PLIGYEFASTPRSQVEGAVYTSTEYPPHRSIPLHNEQSYTREWPLRIWFHCALAARTGGATPIADSRAVYRALDPALVAR FAERELLYVRNFGQGLDLPWQQAFGTGDPREVERICAARGIGCEWRDGDDGEPLLRTRERCQAVARHPRTGELVWFNQAN LFHLSALDEDMQEALVDAVGIENVPRNVYYGDGAPLEPDALAEIRAVLDGQRIVFPWQTGDVLMLDNMLSAHARDPFEGP RKVVVAMARSYREKRGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37397; Mature: 37265
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLSMPAAAACPTLGDLRVEPGLPTVVSPRDGADIALHEAAPLLREIADDVLERAGGVL CCCCCCCHHHHCCCCCCEEECCCCCCEECCCCCCCEEHHHHHHHHHHHHHHHHHHCCCEE FTGFRVASIETFQRFAADFGDPLIGYEFASTPRSQVEGAVYTSTEYPPHRSIPLHNEQSY EECEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCCCCCCC TREWPLRIWFHCALAARTGGATPIADSRAVYRALDPALVARFAERELLYVRNFGQGLDLP CCCCCHHEEHHHHHHHCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHEEEECCCCCCCCCC WQQAFGTGDPREVERICAARGIGCEWRDGDDGEPLLRTRERCQAVARHPRTGELVWFNQA HHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCC NLFHLSALDEDMQEALVDAVGIENVPRNVYYGDGAPLEPDALAEIRAVLDGQRIVFPWQT CEEEEHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECC GDVLMLDNMLSAHARDPFEGPRKVVVAMARSYREKRGA CCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQLSMPAAAACPTLGDLRVEPGLPTVVSPRDGADIALHEAAPLLREIADDVLERAGGVL CCCCCCHHHHCCCCCCEEECCCCCCEECCCCCCCEEHHHHHHHHHHHHHHHHHHCCCEE FTGFRVASIETFQRFAADFGDPLIGYEFASTPRSQVEGAVYTSTEYPPHRSIPLHNEQSY EECEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCCCCCCC TREWPLRIWFHCALAARTGGATPIADSRAVYRALDPALVARFAERELLYVRNFGQGLDLP CCCCCHHEEHHHHHHHCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHEEEECCCCCCCCCC WQQAFGTGDPREVERICAARGIGCEWRDGDDGEPLLRTRERCQAVARHPRTGELVWFNQA HHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCC NLFHLSALDEDMQEALVDAVGIENVPRNVYYGDGAPLEPDALAEIRAVLDGQRIVFPWQT CEEEEHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECC GDVLMLDNMLSAHARDPFEGPRKVVVAMARSYREKRGA CCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA