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The map label for this gene is cbiD [H]

Identifier: 53719371

GI number: 53719371

Start: 2070286

End: 2071377

Strand: Reverse

Name: cbiD [H]

Synonym: BPSL1757

Alternate gene names: 53719371

Gene position: 2071377-2070286 (Counterclockwise)

Preceding gene: 53719372

Following gene: 53719370

Centisome position: 50.84

GC content: 73.53

Gene sequence:

>1092_bases
ATGCGCGACGAAACCCCCGAGCAGCCGGCGCCGCTGCGCTTCGGCTACACGACGGGCAGCTGCGCGAGCGCGACGTCGCT
CGCCGCCGCGCGCCTGCTGCTCACGGGCGTCGCGAGCGACACGGTCGACATCGTGCTGCCGAAGGGCCAGCACGTCGCGA
TGCGCCTCGCGTTCTGCCGCGCGACCGACGACGGCGGCGCCGAGGCGGGCACGATCAAGGACGCGGGCGACGACCCCGAC
GTCACGCACGGCGCGCTCGTGTTCGCGCGCGTGCGGCTCGTCCACGAGCCGGGCGTGCGCTTTCGCGCGGGGCCGGGCGT
CGGCACGGTCACGCGCGCGGGGCTGCCGATCGCCGTCGGCGAGCCGGCGATCAACCCGGTGCCGCGCCGGATGATGACCG
AGCACCTCGCGGCGCTCGCGGCCGAGCACGGCTATGCGGGCGGCTTCGACGTCGCGATCGGCGTCGAGAACGGCGAGGCG
CTCGCGCGCAAGACGATGAACCCGCGCCTCGGCATCGTCGGCGGATTGTCGATTCTCGGCACGACGGGCATCGTGCGGCC
GTTCTCGTGCTCCGCTTACATCGCGTCGATTCATCAGGGGATCGACGTCGCGCGCGCCAACGGCGTCACGCACATCGCCG
CGTGCACCGGCAACGCGAGCGAGGACGCGGTGCGCGCGCGCTACGGCCTGCCCGACATCGCGCTGATCGAGATGGGCGAT
TTCGCGGGCGCGGTGCTCAAGTACCTGCGCCGCGCGAGCGTCGCGCGGCTCACGCTGTGCGGCGGCTTCGGCAAGCTGAG
CAAGCTCGCGGCGGGCCATCTCGATCTGCACAGCCGCCATTCGAGCATCGATTTGCCGCTGCTCGCCGAATGGGCGGGCG
AAGCGGGCGCGAGCGCCGTGCTGCAGCACGAGATCCGCGCGGCGAACACGAGCCAGCAGGCGTTGGCGCTCGCGCTCGCG
CACCACGTGCCGCTCGGCGACGTCGTCTGCGCGCATGCGCGCCGCGTGGCGCGCGACATCGTGCCCGGCGAGGTCGACGT
CGAGACGCTCGCGATCGACCGCGAGGGCCGCATCGTCGGCGTCGCGCCATGA

Upstream 100 bases:

>100_bases
ACGCGCAGCCGCTCGGCGGCTTCGACGCGTGGCGGCAGGCGCTGCCCGTCACGCTGTACGACGCGCGCAAGCCGCGCGGC
GCGCAGCCGGAGCACGCATG

Downstream 100 bases:

>100_bases
GCGTGCGCCGCGTGTTGCTGCTCGGCGGCACGGGCGACGCGCTGCGCACCGCGCGCGCGCTCGCGCCGCACGACGTGTAC
AGCCTCGCCGGCCTCGGCCG

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MRDETPEQPAPLRFGYTTGSCASATSLAAARLLLTGVASDTVDIVLPKGQHVAMRLAFCRATDDGGAEAGTIKDAGDDPD
VTHGALVFARVRLVHEPGVRFRAGPGVGTVTRAGLPIAVGEPAINPVPRRMMTEHLAALAAEHGYAGGFDVAIGVENGEA
LARKTMNPRLGIVGGLSILGTTGIVRPFSCSAYIASIHQGIDVARANGVTHIAACTGNASEDAVRARYGLPDIALIEMGD
FAGAVLKYLRRASVARLTLCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAEWAGEAGASAVLQHEIRAANTSQQALALALA
HHVPLGDVVCAHARRVARDIVPGEVDVETLAIDREGRIVGVAP

Sequences:

>Translated_363_residues
MRDETPEQPAPLRFGYTTGSCASATSLAAARLLLTGVASDTVDIVLPKGQHVAMRLAFCRATDDGGAEAGTIKDAGDDPD
VTHGALVFARVRLVHEPGVRFRAGPGVGTVTRAGLPIAVGEPAINPVPRRMMTEHLAALAAEHGYAGGFDVAIGVENGEA
LARKTMNPRLGIVGGLSILGTTGIVRPFSCSAYIASIHQGIDVARANGVTHIAACTGNASEDAVRARYGLPDIALIEMGD
FAGAVLKYLRRASVARLTLCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAEWAGEAGASAVLQHEIRAANTSQQALALALA
HHVPLGDVVCAHARRVARDIVPGEVDVETLAIDREGRIVGVAP
>Mature_363_residues
MRDETPEQPAPLRFGYTTGSCASATSLAAARLLLTGVASDTVDIVLPKGQHVAMRLAFCRATDDGGAEAGTIKDAGDDPD
VTHGALVFARVRLVHEPGVRFRAGPGVGTVTRAGLPIAVGEPAINPVPRRMMTEHLAALAAEHGYAGGFDVAIGVENGEA
LARKTMNPRLGIVGGLSILGTTGIVRPFSCSAYIASIHQGIDVARANGVTHIAACTGNASEDAVRARYGLPDIALIEMGD
FAGAVLKYLRRASVARLTLCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAEWAGEAGASAVLQHEIRAANTSQQALALALA
HHVPLGDVVCAHARRVARDIVPGEVDVETLAIDREGRIVGVAP

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 37595; Mature: 37595

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDETPEQPAPLRFGYTTGSCASATSLAAARLLLTGVASDTVDIVLPKGQHVAMRLAFCR
CCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEEE
ATDDGGAEAGTIKDAGDDPDVTHGALVFARVRLVHEPGVRFRAGPGVGTVTRAGLPIAVG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHCCCCEEEC
EPAINPVPRRMMTEHLAALAAEHGYAGGFDVAIGVENGEALARKTMNPRLGIVGGLSILG
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHCCCCCEEEECHHHHC
TTGIVRPFSCSAYIASIHQGIDVARANGVTHIAACTGNASEDAVRARYGLPDIALIEMGD
CCCCCCCCCHHHHHHHHHHCCHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCEEEEECCH
FAGAVLKYLRRASVARLTLCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAEWAGEAGASAV
HHHHHHHHHHHHHHHEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHH
LQHEIRAANTSQQALALALAHHVPLGDVVCAHARRVARDIVPGEVDVETLAIDREGRIVG
HHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEE
VAP
ECC
>Mature Secondary Structure
MRDETPEQPAPLRFGYTTGSCASATSLAAARLLLTGVASDTVDIVLPKGQHVAMRLAFCR
CCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEEE
ATDDGGAEAGTIKDAGDDPDVTHGALVFARVRLVHEPGVRFRAGPGVGTVTRAGLPIAVG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHCCCCEEEC
EPAINPVPRRMMTEHLAALAAEHGYAGGFDVAIGVENGEALARKTMNPRLGIVGGLSILG
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHCCCCCEEEECHHHHC
TTGIVRPFSCSAYIASIHQGIDVARANGVTHIAACTGNASEDAVRARYGLPDIALIEMGD
CCCCCCCCCHHHHHHHHHHCCHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCEEEEECCH
FAGAVLKYLRRASVARLTLCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAEWAGEAGASAV
HHHHHHHHHHHHHHHEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHH
LQHEIRAANTSQQALALALAHHVPLGDVVCAHARRVARDIVPGEVDVETLAIDREGRIVG
HHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEE
VAP
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA