| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is quiP [H]
Identifier: 53719324
GI number: 53719324
Start: 1994317
End: 1996689
Strand: Reverse
Name: quiP [H]
Synonym: BPSL1710
Alternate gene names: 53719324
Gene position: 1996689-1994317 (Counterclockwise)
Preceding gene: 53719325
Following gene: 53719318
Centisome position: 49.0
GC content: 73.66
Gene sequence:
>2373_bases ATGGCATCTCGCACGAACCGCTTGCCGCGGTGGCTCAAGATCCTGCCCGGCGTCATTCTTCTCGGCGCGCTGCTCGTCGC GGCCGGCGCGGCGCTGTTCCTGCGCGCGAGCCTGCCGCGGCTCGACGGCGACGTGCGCGCGCCGACGCTCGGCGGCCCGA TGACGATCGAACGCGACGCCGCGGGCGTGCCGACCGTCGCCGCGCGCGACCGCTTCGACGCCGCCTACGGCATCGGCTAC CTGCATGCGCAGGACCGCTTCTTCCAGATGGATTATCTGCGCCGGACCGGAGCAGGGGAGTTGGCGGAGCTGCTCGGGCC CGCCGCGCTGGATTTCGATCGCGAGCACCGGCTGTTCCGGTTTCGCGCGCGCGCCGCGGCGGCGTTCGCGCAGTTGCCGC CCGACGAGCGGCGCCTGCTCGAACGCTACACGCAAGGCGTGAACGACGGCCTCGCCGCGCTGCGCGCCCGGCCGTTCGAA TACGCGCTGCTCGGCGAGCCGCCGGCGCGGTGGCGGCCCGAAGATTCGCTGCTCGTGATCTGGGCGATGTACTTTCAGGT GCAGGGCACGCTCGCGTCGCGCGACATCGCGCGCAACTGGCTGACGGCGCACGCGACGCAGCAGCAGCGCGCCTTCCTGC TGCCGTCGTCGAGCGGATTCGACGCGCCGCTCGATGCGCCGCGCATCGACGAAGCGCCCGCGCCGCTGCCCGACGCCGCG CCCGACTGGTTCCGCGCCGCAGGCGACGGCGCGGCCAAGCGCGCATCGCTCGATTTCCGCTCGTCGGTCGGCAGCAACAA CTGGGCCATTGCCGGCAGCCGCAGCGCACGCGGCGCGGCCATCGTCGGCGACGACATGCACCTCGTGCTCGGCCTGCCGA ACACCTGGTATCGCGCGGCCTTCACCTATCCGGGCGGCGCGGCGCCCGTGCGGCGGGCCGTCGGCGTGACGCTCGCCGGG CTGCCGGCGATCGTGGCCGGCAGCAACGGGCATGTCGCATGGGGCTTGACGGTCGGTTACGCGGATTGCCTCGACCTCGT GCCGCTCGAGCGCGACGGCGACGATTCGCGGGCGTTCCGGATGGGCGGCGCGCGCCAGGTCGCGCGCCGGTACGTCGAAT CGATCCGGGTGCGCGGCGGCGCGTCCGTTTCGCTGACCGTGCTGGAAACGACGGTCGGGCCGGTGCGGGAAATCGGCGGC CGGCCCTATGCGGTCCACTGGGTCGCGCAGTCGCCGGGCGCGGTGAACCTGGGGCTCGCGCGCCTCGCGGACGCCGTCGA CGTCGACGGCGCGATGCGCGTGGCGAATACGCTCGGCATTCCGGCCGAGAACATCGTGGTCGGCGACCGCGCCGGGCGAA TCGGCTGGACCATCGCCGGCGCGCTGCCGGACCGGCGCGCGCCGCGCGGCGGCGAGGGCGCGGCGTGGCGGTCGCTGCTG CCGCCCGACGCGTATCCGCGCGTCGTCGATCCGTCCGGCGGCCAGCTCTGGACCGCGAACAGCCGCCAGTTGGCGGGCGA CGCATACCGGTTGATCGGCGATGGCGGCACGGATCTCGGCGCGCGGGCGACCCAGTTGCGCGACGGACTGACGGCGCTCG GCCGCACCGACGAACAAGCGGCGTATCGGATCGACTTCGACGATCGCGCGCTGTTCATCGCGCAGTGGCGCGACCGCGCG CTGCGCGTGCTCGACGACGCGGCGCTCGCGGGCCACCCGTCGCGCGCGGAATTCCGCCGGCTGCTCGAGCACGGCTGGAC GGGCCGGGCGAGCGTCGACTCGGTCGGGTACACGCTCGCGCGCGGCTTTCTGTATCGGCTGTACGACGTCACGTTCGACG GGCTGAACGCACGCCTGAAGCAAGTCGATGCGGGCGCGGACTACGAACTGGCGAATCTGCGCTGGCCGGCCGTCGTCGCG CGGCTGCTCGACGCGCAGCCGCCGGGCTGGCTGCCGGCCGGCGCGTCGAGCTGGCGCGACGTGCAACTGATCGCGATCGA CCGGACCATCGCCGCGCTCACGGCCGACGGCGCGCCGCTCGCGCGGGCGAGCTGGGGCGCGCGCAACACGCTGCGGATCG CGCATCCGTTCGCCGGCAGCCTGCCGCTGCTCGGCGGATGGCTGACGGCGCCGGCCGCGCAGATGCCGGGTGATTCGCAC ATGCCGCGCGTCGCCGCGCCGGATTTCGGGCAATCCGAGCGGATGGTCGTGTCGCCGGGGCACGAGGAATTCGGGATCTT CAACATGCCGGGCGGGCAGAGCGGGCATCCGCTGAGCCCGTTTTTCCTCGCGGGCCACGATGCGTGGGTGCGCGCGGAGC CGACGCCGTTCTTGCCCGGCGTCGCGCGGCATACGTTGAGATTCGCGCCGTAG
Upstream 100 bases:
>100_bases CCGCCGCCTGCCTCCGGAGCGCCGCGTGCCGCCGCGCTCCGGAGGCGGGCGGCGCGGCGCCAACCCGTCTCCCCGTCCCG TCTCAGGAAATCGCGTACTC
Downstream 100 bases:
>100_bases CCGTGATCTTGGTCGTGACCGTGACCGCGGCGAACGCGTGAAGCGCTTCGGTGCGGTTTCGCTTCCGGATGCGGGCGCCG TGCTCAGCCCGAGTCGCTCG
Product: putative penicillin amidase
Products: NA
Alternate protein names: AHL acylase quiP; Acyl-HSL acylase quiP; Quorum signal utilization and inactivation protein; Acyl-HSL acylase quiP subunit alpha; Acyl-HSL acylase quiP subunit beta [H]
Number of amino acids: Translated: 790; Mature: 789
Protein sequence:
>790_residues MASRTNRLPRWLKILPGVILLGALLVAAGAALFLRASLPRLDGDVRAPTLGGPMTIERDAAGVPTVAARDRFDAAYGIGY LHAQDRFFQMDYLRRTGAGELAELLGPAALDFDREHRLFRFRARAAAAFAQLPPDERRLLERYTQGVNDGLAALRARPFE YALLGEPPARWRPEDSLLVIWAMYFQVQGTLASRDIARNWLTAHATQQQRAFLLPSSSGFDAPLDAPRIDEAPAPLPDAA PDWFRAAGDGAAKRASLDFRSSVGSNNWAIAGSRSARGAAIVGDDMHLVLGLPNTWYRAAFTYPGGAAPVRRAVGVTLAG LPAIVAGSNGHVAWGLTVGYADCLDLVPLERDGDDSRAFRMGGARQVARRYVESIRVRGGASVSLTVLETTVGPVREIGG RPYAVHWVAQSPGAVNLGLARLADAVDVDGAMRVANTLGIPAENIVVGDRAGRIGWTIAGALPDRRAPRGGEGAAWRSLL PPDAYPRVVDPSGGQLWTANSRQLAGDAYRLIGDGGTDLGARATQLRDGLTALGRTDEQAAYRIDFDDRALFIAQWRDRA LRVLDDAALAGHPSRAEFRRLLEHGWTGRASVDSVGYTLARGFLYRLYDVTFDGLNARLKQVDAGADYELANLRWPAVVA RLLDAQPPGWLPAGASSWRDVQLIAIDRTIAALTADGAPLARASWGARNTLRIAHPFAGSLPLLGGWLTAPAAQMPGDSH MPRVAAPDFGQSERMVVSPGHEEFGIFNMPGGQSGHPLSPFFLAGHDAWVRAEPTPFLPGVARHTLRFAP
Sequences:
>Translated_790_residues MASRTNRLPRWLKILPGVILLGALLVAAGAALFLRASLPRLDGDVRAPTLGGPMTIERDAAGVPTVAARDRFDAAYGIGY LHAQDRFFQMDYLRRTGAGELAELLGPAALDFDREHRLFRFRARAAAAFAQLPPDERRLLERYTQGVNDGLAALRARPFE YALLGEPPARWRPEDSLLVIWAMYFQVQGTLASRDIARNWLTAHATQQQRAFLLPSSSGFDAPLDAPRIDEAPAPLPDAA PDWFRAAGDGAAKRASLDFRSSVGSNNWAIAGSRSARGAAIVGDDMHLVLGLPNTWYRAAFTYPGGAAPVRRAVGVTLAG LPAIVAGSNGHVAWGLTVGYADCLDLVPLERDGDDSRAFRMGGARQVARRYVESIRVRGGASVSLTVLETTVGPVREIGG RPYAVHWVAQSPGAVNLGLARLADAVDVDGAMRVANTLGIPAENIVVGDRAGRIGWTIAGALPDRRAPRGGEGAAWRSLL PPDAYPRVVDPSGGQLWTANSRQLAGDAYRLIGDGGTDLGARATQLRDGLTALGRTDEQAAYRIDFDDRALFIAQWRDRA LRVLDDAALAGHPSRAEFRRLLEHGWTGRASVDSVGYTLARGFLYRLYDVTFDGLNARLKQVDAGADYELANLRWPAVVA RLLDAQPPGWLPAGASSWRDVQLIAIDRTIAALTADGAPLARASWGARNTLRIAHPFAGSLPLLGGWLTAPAAQMPGDSH MPRVAAPDFGQSERMVVSPGHEEFGIFNMPGGQSGHPLSPFFLAGHDAWVRAEPTPFLPGVARHTLRFAP >Mature_789_residues ASRTNRLPRWLKILPGVILLGALLVAAGAALFLRASLPRLDGDVRAPTLGGPMTIERDAAGVPTVAARDRFDAAYGIGYL HAQDRFFQMDYLRRTGAGELAELLGPAALDFDREHRLFRFRARAAAAFAQLPPDERRLLERYTQGVNDGLAALRARPFEY ALLGEPPARWRPEDSLLVIWAMYFQVQGTLASRDIARNWLTAHATQQQRAFLLPSSSGFDAPLDAPRIDEAPAPLPDAAP DWFRAAGDGAAKRASLDFRSSVGSNNWAIAGSRSARGAAIVGDDMHLVLGLPNTWYRAAFTYPGGAAPVRRAVGVTLAGL PAIVAGSNGHVAWGLTVGYADCLDLVPLERDGDDSRAFRMGGARQVARRYVESIRVRGGASVSLTVLETTVGPVREIGGR PYAVHWVAQSPGAVNLGLARLADAVDVDGAMRVANTLGIPAENIVVGDRAGRIGWTIAGALPDRRAPRGGEGAAWRSLLP PDAYPRVVDPSGGQLWTANSRQLAGDAYRLIGDGGTDLGARATQLRDGLTALGRTDEQAAYRIDFDDRALFIAQWRDRAL RVLDDAALAGHPSRAEFRRLLEHGWTGRASVDSVGYTLARGFLYRLYDVTFDGLNARLKQVDAGADYELANLRWPAVVAR LLDAQPPGWLPAGASSWRDVQLIAIDRTIAALTADGAPLARASWGARNTLRIAHPFAGSLPLLGGWLTAPAAQMPGDSHM PRVAAPDFGQSERMVVSPGHEEFGIFNMPGGQSGHPLSPFFLAGHDAWVRAEPTPFLPGVARHTLRFAP
Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of seven or more carbons in lengt
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014395 - InterPro: IPR002692 [H]
Pfam domain/function: PF01804 Penicil_amidase [H]
EC number: =3.5.1.97 [H]
Molecular weight: Translated: 84911; Mature: 84780
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRTNRLPRWLKILPGVILLGALLVAAGAALFLRASLPRLDGDVRAPTLGGPMTIERDA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCC AGVPTVAARDRFDAAYGIGYLHAQDRFFQMDYLRRTGAGELAELLGPAALDFDREHRLFR CCCCCHHHCCCCCHHHCEEEEECCCHHHHHHHHHHCCCHHHHHHHCCHHCCCCCHHHHHH FRARAAAAFAQLPPDERRLLERYTQGVNDGLAALRARPFEYALLGEPPARWRPEDSLLVI HHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEE WAMYFQVQGTLASRDIARNWLTAHATQQQRAFLLPSSSGFDAPLDAPRIDEAPAPLPDAA EEEEHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC PDWFRAAGDGAAKRASLDFRSSVGSNNWAIAGSRSARGAAIVGDDMHLVLGLPNTWYRAA CHHHHHCCCCCHHHCCCHHHHHCCCCCEEEECCCCCCCEEEECCCEEEEEECCCCCEEEE FTYPGGAAPVRRAVGVTLAGLPAIVAGSNGHVAWGLTVGYADCLDLVPLERDGDDSRAFR EECCCCCHHHHHHHCCEEECCCEEEECCCCCEEEEEEECHHHHHHCCCCCCCCCCCHHHH MGGARQVARRYVESIRVRGGASVSLTVLETTVGPVREIGGRPYAVHWVAQSPGAVNLGLA CCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHCCCCEEEEEEECCCCCEEHHHH RLADAVDVDGAMRVANTLGIPAENIVVGDRAGRIGWTIAGALPDRRAPRGGEGAAWRSLL HHHHHHCCCCHHHHHHHCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHCCC PPDAYPRVVDPSGGQLWTANSRQLAGDAYRLIGDGGTDLGARATQLRDGLTALGRTDEQA CCCCCCCEECCCCCEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCC AYRIDFDDRALFIAQWRDRALRVLDDAALAGHPSRAEFRRLLEHGWTGRASVDSVGYTLA EEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH RGFLYRLYDVTFDGLNARLKQVDAGADYELANLRWPAVVARLLDAQPPGWLPAGASSWRD HHHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCC VQLIAIDRTIAALTADGAPLARASWGARNTLRIAHPFAGSLPLLGGWLTAPAAQMPGDSH EEEEEECCEEEEEECCCCCCHHCCCCCCCEEEEECCCCCCCCCCCCHHCCCCHHCCCCCC MPRVAAPDFGQSERMVVSPGHEEFGIFNMPGGQSGHPLSPFFLAGHDAWVRAEPTPFLPG CCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCEEEECCCCEEECCCCCCCCC VARHTLRFAP HHHHHEECCC >Mature Secondary Structure ASRTNRLPRWLKILPGVILLGALLVAAGAALFLRASLPRLDGDVRAPTLGGPMTIERDA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCC AGVPTVAARDRFDAAYGIGYLHAQDRFFQMDYLRRTGAGELAELLGPAALDFDREHRLFR CCCCCHHHCCCCCHHHCEEEEECCCHHHHHHHHHHCCCHHHHHHHCCHHCCCCCHHHHHH FRARAAAAFAQLPPDERRLLERYTQGVNDGLAALRARPFEYALLGEPPARWRPEDSLLVI HHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEE WAMYFQVQGTLASRDIARNWLTAHATQQQRAFLLPSSSGFDAPLDAPRIDEAPAPLPDAA EEEEHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC PDWFRAAGDGAAKRASLDFRSSVGSNNWAIAGSRSARGAAIVGDDMHLVLGLPNTWYRAA CHHHHHCCCCCHHHCCCHHHHHCCCCCEEEECCCCCCCEEEECCCEEEEEECCCCCEEEE FTYPGGAAPVRRAVGVTLAGLPAIVAGSNGHVAWGLTVGYADCLDLVPLERDGDDSRAFR EECCCCCHHHHHHHCCEEECCCEEEECCCCCEEEEEEECHHHHHHCCCCCCCCCCCHHHH MGGARQVARRYVESIRVRGGASVSLTVLETTVGPVREIGGRPYAVHWVAQSPGAVNLGLA CCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHCCCCEEEEEEECCCCCEEHHHH RLADAVDVDGAMRVANTLGIPAENIVVGDRAGRIGWTIAGALPDRRAPRGGEGAAWRSLL HHHHHHCCCCHHHHHHHCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHCCC PPDAYPRVVDPSGGQLWTANSRQLAGDAYRLIGDGGTDLGARATQLRDGLTALGRTDEQA CCCCCCCEECCCCCEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCC AYRIDFDDRALFIAQWRDRALRVLDDAALAGHPSRAEFRRLLEHGWTGRASVDSVGYTLA EEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH RGFLYRLYDVTFDGLNARLKQVDAGADYELANLRWPAVVARLLDAQPPGWLPAGASSWRD HHHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCC VQLIAIDRTIAALTADGAPLARASWGARNTLRIAHPFAGSLPLLGGWLTAPAAQMPGDSH EEEEEECCEEEEEECCCCCCHHCCCCCCCEEEEECCCCCCCCCCCCHHCCCCHHCCCCCC MPRVAAPDFGQSERMVVSPGHEEFGIFNMPGGQSGHPLSPFFLAGHDAWVRAEPTPFLPG CCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCEEEECCCCEEECCCCCCCCC VARHTLRFAP HHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]