| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719295
Identifier: 53719295
GI number: 53719295
Start: 1949196
End: 1949891
Strand: Reverse
Name: 53719295
Synonym: BPSL1670
Alternate gene names: NA
Gene position: 1949891-1949196 (Counterclockwise)
Preceding gene: 53719298
Following gene: 53719282
Centisome position: 47.86
GC content: 67.53
Gene sequence:
>696_bases ATGGGTTTCGTCCGATCCGGCCGTCGTGGCAGATGGGCCGAGGCGACGGGTAAGCCAATCATTGACGACGGACTGTGGGC ACGGATCGAGCCTCTGCTACCGCCGCCAAAGCCGCGCCGCTTCAGGTATCCCGGCCGCAAGCCGGTAGCGGGCCGCGCGG CTTTGACGGGCATCCTATTTGTGCCGAAGACGGGCATTCGTTGGCGCGACTCGCCGTGCGAAATGGGATGCGGCACAGGT GCAGGTTGTTGGCGCAGGTTGCGCGATTGGCAGCAAACTGGCGTGTGGGATCGACTGCACGCAGTGCTGCTGGCGAAACC GCGTGCAGCCGGGAACATCGACTTCTCTCTCCCGCGTGATCGTCGACTCATCGTCGATTCGTGCGGTTGGGGCGGGCGAA AAACTGGCCCGAACCCCACCGGTCGAGCGCGCCCCCGGCCGAAGCACCCCATCGCCATCGACGCCAACGGAACGCCGATC GCAGCAATCCCGACCGGCGCGAATCGGAACGACGTCACCCAACGGGTTCCGCTGATCGAGGCCATCGCGCCGATCGGCGG CGTGCGTGAACGGCCTTCCGCGCCGTCCCGCCCGCGTCCACGCCGGCCGTGGCTACGACCACGGCAAATACCGACGCATC CCGCACGAGCGCGACATCCCCACCAGCATCGCGCGGCGCGGTCATCCGCACGGTAG
Upstream 100 bases:
>100_bases CATTTCACAACACCTTCCAAGTGGAACCTTACCCTTTCCGACCACACTCGAATATCAACAAATGTCAACCTCGTCGCTGC CGATTCGGCATGGTCGACTC
Downstream 100 bases:
>100_bases TGGCCTCGAAAAGCCCGTTGGGTCGTCAAGCGTACTCATGCTTGGCTGCGTCATTTCCGCCATCTACGTATTCGCTTTGA ACGTCGCGCCGACATTCACG
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MGFVRSGRRGRWAEATGKPIIDDGLWARIEPLLPPPKPRRFRYPGRKPVAGRAALTGILFVPKTGIRWRDSPCEMGCGTG AGCWRRLRDWQQTGVWDRLHAVLLAKPRAAGNIDFSLPRDRRLIVDSCGWGGRKTGPNPTGRARPRPKHPIAIDANGTPI AAIPTGANRNDVTQRVPLIEAIAPIGGVRERPSAPSRPRPRRPWLRPRQIPTHPARARHPHQHRAARSSAR
Sequences:
>Translated_231_residues MGFVRSGRRGRWAEATGKPIIDDGLWARIEPLLPPPKPRRFRYPGRKPVAGRAALTGILFVPKTGIRWRDSPCEMGCGTG AGCWRRLRDWQQTGVWDRLHAVLLAKPRAAGNIDFSLPRDRRLIVDSCGWGGRKTGPNPTGRARPRPKHPIAIDANGTPI AAIPTGANRNDVTQRVPLIEAIAPIGGVRERPSAPSRPRPRRPWLRPRQIPTHPARARHPHQHRAARSSAR >Mature_230_residues GFVRSGRRGRWAEATGKPIIDDGLWARIEPLLPPPKPRRFRYPGRKPVAGRAALTGILFVPKTGIRWRDSPCEMGCGTGA GCWRRLRDWQQTGVWDRLHAVLLAKPRAAGNIDFSLPRDRRLIVDSCGWGGRKTGPNPTGRARPRPKHPIAIDANGTPIA AIPTGANRNDVTQRVPLIEAIAPIGGVRERPSAPSRPRPRRPWLRPRQIPTHPARARHPHQHRAARSSAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 6 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25683; Mature: 25552
Theoretical pI: Translated: 12.44; Mature: 12.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFVRSGRRGRWAEATGKPIIDDGLWARIEPLLPPPKPRRFRYPGRKPVAGRAALTGILF CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHEEEEE VPKTGIRWRDSPCEMGCGTGAGCWRRLRDWQQTGVWDRLHAVLLAKPRAAGNIDFSLPRD ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEECCCC RRLIVDSCGWGGRKTGPNPTGRARPRPKHPIAIDANGTPIAAIPTGANRNDVTQRVPLIE CEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHH AIAPIGGVRERPSAPSRPRPRRPWLRPRQIPTHPARARHPHQHRAARSSAR HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure GFVRSGRRGRWAEATGKPIIDDGLWARIEPLLPPPKPRRFRYPGRKPVAGRAALTGILF CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHEEEEE VPKTGIRWRDSPCEMGCGTGAGCWRRLRDWQQTGVWDRLHAVLLAKPRAAGNIDFSLPRD ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEECCCC RRLIVDSCGWGGRKTGPNPTGRARPRPKHPIAIDANGTPIAAIPTGANRNDVTQRVPLIE CEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHH AIAPIGGVRERPSAPSRPRPRRPWLRPRQIPTHPARARHPHQHRAARSSAR HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1650732 [H]