Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53719295

Identifier: 53719295

GI number: 53719295

Start: 1949196

End: 1949891

Strand: Reverse

Name: 53719295

Synonym: BPSL1670

Alternate gene names: NA

Gene position: 1949891-1949196 (Counterclockwise)

Preceding gene: 53719298

Following gene: 53719282

Centisome position: 47.86

GC content: 67.53

Gene sequence:

>696_bases
ATGGGTTTCGTCCGATCCGGCCGTCGTGGCAGATGGGCCGAGGCGACGGGTAAGCCAATCATTGACGACGGACTGTGGGC
ACGGATCGAGCCTCTGCTACCGCCGCCAAAGCCGCGCCGCTTCAGGTATCCCGGCCGCAAGCCGGTAGCGGGCCGCGCGG
CTTTGACGGGCATCCTATTTGTGCCGAAGACGGGCATTCGTTGGCGCGACTCGCCGTGCGAAATGGGATGCGGCACAGGT
GCAGGTTGTTGGCGCAGGTTGCGCGATTGGCAGCAAACTGGCGTGTGGGATCGACTGCACGCAGTGCTGCTGGCGAAACC
GCGTGCAGCCGGGAACATCGACTTCTCTCTCCCGCGTGATCGTCGACTCATCGTCGATTCGTGCGGTTGGGGCGGGCGAA
AAACTGGCCCGAACCCCACCGGTCGAGCGCGCCCCCGGCCGAAGCACCCCATCGCCATCGACGCCAACGGAACGCCGATC
GCAGCAATCCCGACCGGCGCGAATCGGAACGACGTCACCCAACGGGTTCCGCTGATCGAGGCCATCGCGCCGATCGGCGG
CGTGCGTGAACGGCCTTCCGCGCCGTCCCGCCCGCGTCCACGCCGGCCGTGGCTACGACCACGGCAAATACCGACGCATC
CCGCACGAGCGCGACATCCCCACCAGCATCGCGCGGCGCGGTCATCCGCACGGTAG

Upstream 100 bases:

>100_bases
CATTTCACAACACCTTCCAAGTGGAACCTTACCCTTTCCGACCACACTCGAATATCAACAAATGTCAACCTCGTCGCTGC
CGATTCGGCATGGTCGACTC

Downstream 100 bases:

>100_bases
TGGCCTCGAAAAGCCCGTTGGGTCGTCAAGCGTACTCATGCTTGGCTGCGTCATTTCCGCCATCTACGTATTCGCTTTGA
ACGTCGCGCCGACATTCACG

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MGFVRSGRRGRWAEATGKPIIDDGLWARIEPLLPPPKPRRFRYPGRKPVAGRAALTGILFVPKTGIRWRDSPCEMGCGTG
AGCWRRLRDWQQTGVWDRLHAVLLAKPRAAGNIDFSLPRDRRLIVDSCGWGGRKTGPNPTGRARPRPKHPIAIDANGTPI
AAIPTGANRNDVTQRVPLIEAIAPIGGVRERPSAPSRPRPRRPWLRPRQIPTHPARARHPHQHRAARSSAR

Sequences:

>Translated_231_residues
MGFVRSGRRGRWAEATGKPIIDDGLWARIEPLLPPPKPRRFRYPGRKPVAGRAALTGILFVPKTGIRWRDSPCEMGCGTG
AGCWRRLRDWQQTGVWDRLHAVLLAKPRAAGNIDFSLPRDRRLIVDSCGWGGRKTGPNPTGRARPRPKHPIAIDANGTPI
AAIPTGANRNDVTQRVPLIEAIAPIGGVRERPSAPSRPRPRRPWLRPRQIPTHPARARHPHQHRAARSSAR
>Mature_230_residues
GFVRSGRRGRWAEATGKPIIDDGLWARIEPLLPPPKPRRFRYPGRKPVAGRAALTGILFVPKTGIRWRDSPCEMGCGTGA
GCWRRLRDWQQTGVWDRLHAVLLAKPRAAGNIDFSLPRDRRLIVDSCGWGGRKTGPNPTGRARPRPKHPIAIDANGTPIA
AIPTGANRNDVTQRVPLIEAIAPIGGVRERPSAPSRPRPRRPWLRPRQIPTHPARARHPHQHRAARSSAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25683; Mature: 25552

Theoretical pI: Translated: 12.44; Mature: 12.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFVRSGRRGRWAEATGKPIIDDGLWARIEPLLPPPKPRRFRYPGRKPVAGRAALTGILF
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHEEEEE
VPKTGIRWRDSPCEMGCGTGAGCWRRLRDWQQTGVWDRLHAVLLAKPRAAGNIDFSLPRD
ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEECCCC
RRLIVDSCGWGGRKTGPNPTGRARPRPKHPIAIDANGTPIAAIPTGANRNDVTQRVPLIE
CEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHH
AIAPIGGVRERPSAPSRPRPRRPWLRPRQIPTHPARARHPHQHRAARSSAR
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
GFVRSGRRGRWAEATGKPIIDDGLWARIEPLLPPPKPRRFRYPGRKPVAGRAALTGILF
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHEEEEE
VPKTGIRWRDSPCEMGCGTGAGCWRRLRDWQQTGVWDRLHAVLLAKPRAAGNIDFSLPRD
ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEECCCC
RRLIVDSCGWGGRKTGPNPTGRARPRPKHPIAIDANGTPIAAIPTGANRNDVTQRVPLIE
CEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHH
AIAPIGGVRERPSAPSRPRPRRPWLRPRQIPTHPARARHPHQHRAARSSAR
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1650732 [H]