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The map label for this gene is 53719230

Identifier: 53719230

GI number: 53719230

Start: 1855778

End: 1856272

Strand: Reverse

Name: 53719230

Synonym: BPSL1600

Alternate gene names: NA

Gene position: 1856272-1855778 (Counterclockwise)

Preceding gene: 53719231

Following gene: 53719229

Centisome position: 45.56

GC content: 72.93

Gene sequence:

>495_bases
ATGAAGCTTCGAAACCTGTCGATCACCGCCGCCGCCTTCGCGCTCGCATTCGGCCTGTCCGCCTGCGGCCAGCGCGACGC
CGGCGCGCCGCCCGCCGCCGCCGCGTCCGCATCGATCGCGCCGGCCGCCTCCGTCACGCTCGACGCATCCGCGAACGCGA
GCCCGTCGGCCGCATCCGCGCCCGCCGCGTCGAGCGAGGCGGCGCCCGCCGCCACGACGGCCGCCGCCGCGGATACGCCG
AACCCCGGCGGCGAGAAGGTGTTCAAGAGCGTGTGCTTCATGTGCCACCAGACGGGCGCGGCCGGCGCGCCGATCGCCGG
CAACAAGGACGATTGGGCGCCGCGCATCGCGCAAGGCAAGCCGACGCTGTACAAGCACGCGCTCGAAGGCTTCACCGGCA
ACAAGGGCACGATGCCGCCGCGCGGCGGCAACCCGAGCCTGAAGGACAACGAAGTCGAAGCCGCCGTCGACTTCATGGTC
GCCAAGGCGCACTGA

Upstream 100 bases:

>100_bases
CGCCGCCGCGCCGCTGCTCGGCCACGAACCCCCATCCGCGCACGGGCTGCCGTCCGACGCGCGGGCAATCGCATCCTGAC
TCCCCTACGAGGAAAAGACC

Downstream 100 bases:

>100_bases
CCGCGTTCGCGCGGGCGCCGCGCGCGGCCGCCCGCGCGACTTCCTCCAAGTGACCCCCATGAAAGCACTGTTCCGGATCC
TGCTCATCGCGTTCTTCGTC

Product: putative cytochrome c-related lipoprotein

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKLRNLSITAAAFALAFGLSACGQRDAGAPPAAAASASIAPAASVTLDASANASPSAASAPAASSEAAPAATTAAAADTP
NPGGEKVFKSVCFMCHQTGAAGAPIAGNKDDWAPRIAQGKPTLYKHALEGFTGNKGTMPPRGGNPSLKDNEVEAAVDFMV
AKAH

Sequences:

>Translated_164_residues
MKLRNLSITAAAFALAFGLSACGQRDAGAPPAAAASASIAPAASVTLDASANASPSAASAPAASSEAAPAATTAAAADTP
NPGGEKVFKSVCFMCHQTGAAGAPIAGNKDDWAPRIAQGKPTLYKHALEGFTGNKGTMPPRGGNPSLKDNEVEAAVDFMV
AKAH
>Mature_164_residues
MKLRNLSITAAAFALAFGLSACGQRDAGAPPAAAASASIAPAASVTLDASANASPSAASAPAASSEAAPAATTAAAADTP
NPGGEKVFKSVCFMCHQTGAAGAPIAGNKDDWAPRIAQGKPTLYKHALEGFTGNKGTMPPRGGNPSLKDNEVEAAVDFMV
AKAH

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 16118; Mature: 16118

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRNLSITAAAFALAFGLSACGQRDAGAPPAAAASASIAPAASVTLDASANASPSAASA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCEEEECCCCCCCCCCCCC
PAASSEAAPAATTAAAADTPNPGGEKVFKSVCFMCHQTGAAGAPIAGNKDDWAPRIAQGK
CCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PTLYKHALEGFTGNKGTMPPRGGNPSLKDNEVEAAVDFMVAKAH
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLRNLSITAAAFALAFGLSACGQRDAGAPPAAAASASIAPAASVTLDASANASPSAASA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCEEEECCCCCCCCCCCCC
PAASSEAAPAATTAAAADTPNPGGEKVFKSVCFMCHQTGAAGAPIAGNKDDWAPRIAQGK
CCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PTLYKHALEGFTGNKGTMPPRGGNPSLKDNEVEAAVDFMVAKAH
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]