Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53719217

Identifier: 53719217

GI number: 53719217

Start: 1839642

End: 1840157

Strand: Reverse

Name: 53719217

Synonym: BPSL1583

Alternate gene names: NA

Gene position: 1840157-1839642 (Counterclockwise)

Preceding gene: 53719220

Following gene: 53719215

Centisome position: 45.16

GC content: 69.19

Gene sequence:

>516_bases
ATGAAAAAGATCTCGCTGACCTTCGCCGCCGCGCTCGCGCTGGCGGCCACGCTCGCGCACGCGCAAACGGGCGCGTCGGC
GCCCGCCGCGGCGGCCTCCACGCCGGCCGCGGCCGCGCGCCACGAGGCGCGCGTCGAGGAACGCATCACGTACCTGCACA
ACCAGTTGAAGATCACGCCGGAGCAGGAATCGCAATGGAAGACGTTCGCCGATACGATGCGCGACAACGGCGCGACGATG
GCGCGTTTTTATCGCGAACGAATGGAGAACAAGACCGCTTCCGCGCTCGACGACATGAAGCAGTACGCGGAGCTCATGCA
GGCGAACGCGGACGGCGCGAAAAAGCTCGCCGACGCGTTCGCGCCGCTGTACGCGAGCTTCCCGGCCGAGCAGAAGGCAC
TGGCCGACTCGACGTTCCGCAAATGGCTGCATCCGGAGCCGGGCAAGGCGCGCGCGCGCAAGCACCCGGGCAAGGCGGAC
GGCCAGCCCGCCTCGAGCGCCGGCGGCGCGCAGTAA

Upstream 100 bases:

>100_bases
CCGCCGTGCTACTAATAGCGCGGAAAGCGCGGCGTGCAAGCGCCCGGGCGCGCCGCCCCCGCCTTCCGGATGTCCGTCCG
ACGACCACCCAGGAGCTCCC

Downstream 100 bases:

>100_bases
CGCGTGCGAATGCGTGACACGCGGGCGCGGGCGCGTCTGCCGTCTGCCGTCTGCCGTCTGCCGTCTGCCGTCTGCCGTCT
GCCGTCTGCCGTCTGCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKKISLTFAAALALAATLAHAQTGASAPAAAASTPAAAARHEARVEERITYLHNQLKITPEQESQWKTFADTMRDNGATM
ARFYRERMENKTASALDDMKQYAELMQANADGAKKLADAFAPLYASFPAEQKALADSTFRKWLHPEPGKARARKHPGKAD
GQPASSAGGAQ

Sequences:

>Translated_171_residues
MKKISLTFAAALALAATLAHAQTGASAPAAAASTPAAAARHEARVEERITYLHNQLKITPEQESQWKTFADTMRDNGATM
ARFYRERMENKTASALDDMKQYAELMQANADGAKKLADAFAPLYASFPAEQKALADSTFRKWLHPEPGKARARKHPGKAD
GQPASSAGGAQ
>Mature_171_residues
MKKISLTFAAALALAATLAHAQTGASAPAAAASTPAAAARHEARVEERITYLHNQLKITPEQESQWKTFADTMRDNGATM
ARFYRERMENKTASALDDMKQYAELMQANADGAKKLADAFAPLYASFPAEQKALADSTFRKWLHPEPGKARARKHPGKAD
GQPASSAGGAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18386; Mature: 18386

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKISLTFAAALALAATLAHAQTGASAPAAAASTPAAAARHEARVEERITYLHNQLKITP
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
EQESQWKTFADTMRDNGATMARFYRERMENKTASALDDMKQYAELMQANADGAKKLADAF
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
APLYASFPAEQKALADSTFRKWLHPEPGKARARKHPGKADGQPASSAGGAQ
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKISLTFAAALALAATLAHAQTGASAPAAAASTPAAAARHEARVEERITYLHNQLKITP
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
EQESQWKTFADTMRDNGATMARFYRERMENKTASALDDMKQYAELMQANADGAKKLADAF
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
APLYASFPAEQKALADSTFRKWLHPEPGKARARKHPGKADGQPASSAGGAQ
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA