| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is blh [H]
Identifier: 53719195
GI number: 53719195
Start: 1811369
End: 1812292
Strand: Reverse
Name: blh [H]
Synonym: BPSL1561
Alternate gene names: 53719195
Gene position: 1812292-1811369 (Counterclockwise)
Preceding gene: 53719199
Following gene: 53719194
Centisome position: 44.48
GC content: 69.26
Gene sequence:
>924_bases ATGGGCTCCAGGAGAAACCTCGTGACAACAGCGTCCACGATGACGGTCGAAGGCTTTTTCGACCCGGCGACATGCACGAT CAGCTATTTGCTGTTCGATTCCGGCAGCGGCGAATGCGCGCTGATCGACAGCGTGCTCGACTACGACCCGAAATCCGGCC GCACGCGCACCGCGAGCGCGGACCAGTTGATCGCGCGCGTCGCGGCGCTCGGCGCGCGCGTGCGCTGGCTGCTCGAGACG CACGTGCACGCCGACCATCTGTCGGCCGCGCCGTACCTGAAAACGCGGGTCGGCGGCGAGATCGCGATCGGCCGCCACGT GACGCGCGTGCAGGACGTGTTCGGCAAGCTGTTCAACGCAGGCCCCGCGTTCGCGCACGACGGCAGCCAGTTCGACCGCC TGCTCGACGACGGCGACACGCTCGCGCTCGGCGCGCTCTCGATCCGCGCGATGCATACGCCGGGCCACACGCCGGCGTGC ATGACCTACGTCGTCACCGAAGCGCATGCGGCGCACGACGCGCGCGACGCGGCCGCGTTCGTCGGCGATACGCTGTTCAT GCCCGACTACGGCACCGCGCGCTGCGACTTCCCCGGCGGCGACGCGCGCTCGCTGTACCGGTCGATCCGCAAGGTGCTGA GCCTGCCGCCCGCGACGCGCCTGTACATGTGCCACGACTATCAGCCGAACGGCCGCGCGATCCAGTACGCGAGCACCGTC GCCGACGAGTTGCGCGAGAACGTGCACATCCGCGAAGGCGTCACCGAGGACGATTTCGTCGCGATGCGCACCGCGCGCGA CGCGACGCTCGACATGCCGGTGCTGATGCTGCCCTCGGTGCAGGTCAACATGCGCGCGGGCCGCCTGCCCGAGCCCGAGG ACAACGGCGTGCGCTACCTGAAGATCCCGCTCGACGCGATCTGA
Upstream 100 bases:
>100_bases GGAGGAACAAAACACGATTTGAATCAAGTACCTGTGCTCGCCGATCGGCAATGCTGTCAACTTGGCACGGTTCTTGTTCG AATGAACGCCATCTCGACGA
Downstream 100 bases:
>100_bases GCCCGCGGCCCGCCTTCCCCAACGACGCACGACATACGACCACGCCCATCATGGAAATCCGCAAGCTGACCGACACGCTA TCGGTCTCCCCCCAGCTCGT
Product: putative metallo-beta-lactamase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MGSRRNLVTTASTMTVEGFFDPATCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLET HVHADHLSAAPYLKTRVGGEIAIGRHVTRVQDVFGKLFNAGPAFAHDGSQFDRLLDDGDTLALGALSIRAMHTPGHTPAC MTYVVTEAHAAHDARDAAAFVGDTLFMPDYGTARCDFPGGDARSLYRSIRKVLSLPPATRLYMCHDYQPNGRAIQYASTV ADELRENVHIREGVTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGRLPEPEDNGVRYLKIPLDAI
Sequences:
>Translated_307_residues MGSRRNLVTTASTMTVEGFFDPATCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLET HVHADHLSAAPYLKTRVGGEIAIGRHVTRVQDVFGKLFNAGPAFAHDGSQFDRLLDDGDTLALGALSIRAMHTPGHTPAC MTYVVTEAHAAHDARDAAAFVGDTLFMPDYGTARCDFPGGDARSLYRSIRKVLSLPPATRLYMCHDYQPNGRAIQYASTV ADELRENVHIREGVTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGRLPEPEDNGVRYLKIPLDAI >Mature_306_residues GSRRNLVTTASTMTVEGFFDPATCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLETH VHADHLSAAPYLKTRVGGEIAIGRHVTRVQDVFGKLFNAGPAFAHDGSQFDRLLDDGDTLALGALSIRAMHTPGHTPACM TYVVTEAHAAHDARDAAAFVGDTLFMPDYGTARCDFPGGDARSLYRSIRKVLSLPPATRLYMCHDYQPNGRAIQYASTVA DELRENVHIREGVTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGRLPEPEDNGVRYLKIPLDAI
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=289, Percent_Identity=30.1038062283737, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17538952, Length=266, Percent_Identity=29.6992481203008, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI221330176, Length=277, Percent_Identity=29.2418772563177, Blast_Score=110, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 33467; Mature: 33336
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSRRNLVTTASTMTVEGFFDPATCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASA CCCCCCEEEEECEEEEECCCCCHHEEEEEEEEECCCCCEEEEEHHHCCCCCCCCCCCCCH DQLIARVAALGARVRWLLETHVHADHLSAAPYLKTRVGGEIAIGRHVTRVQDVFGKLFNA HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHCCCEEEECHHHHHHHHHHHHHHCC GPAFAHDGSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEAHAAHDARDAAAF CCCCCCCCHHHHHHHCCCCEEEEEEEEEEEEECCCCCCHHHHEEHHHHHHHHHHHHHHHH VGDTLFMPDYGTARCDFPGGDARSLYRSIRKVLSLPPATRLYMCHDYQPNGRAIQYASTV HCCEEECCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEHHHHH ADELRENVHIREGVTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGRLPEPEDNGVRYL HHHHHHCCCHHCCCCCCHHEEEECCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCEEEE KIPLDAI EEECCCC >Mature Secondary Structure GSRRNLVTTASTMTVEGFFDPATCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASA CCCCCEEEEECEEEEECCCCCHHEEEEEEEEECCCCCEEEEEHHHCCCCCCCCCCCCCH DQLIARVAALGARVRWLLETHVHADHLSAAPYLKTRVGGEIAIGRHVTRVQDVFGKLFNA HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHCCCEEEECHHHHHHHHHHHHHHCC GPAFAHDGSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEAHAAHDARDAAAF CCCCCCCCHHHHHHHCCCCEEEEEEEEEEEEECCCCCCHHHHEEHHHHHHHHHHHHHHHH VGDTLFMPDYGTARCDFPGGDARSLYRSIRKVLSLPPATRLYMCHDYQPNGRAIQYASTV HCCEEECCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEHHHHH ADELRENVHIREGVTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGRLPEPEDNGVRYL HHHHHHCCCHHCCCCCCHHEEEECCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCEEEE KIPLDAI EEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]