| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is mntH [H]
Identifier: 53719188
GI number: 53719188
Start: 1802768
End: 1804075
Strand: Reverse
Name: mntH [H]
Synonym: BPSL1554
Alternate gene names: 53719188
Gene position: 1804075-1802768 (Counterclockwise)
Preceding gene: 53719193
Following gene: 53719187
Centisome position: 44.28
GC content: 73.32
Gene sequence:
>1308_bases ATGAACAGTCGCCCGCTTGCCGCCCGCAGCCCGTCGTCGCGCCGCCCGTCCGCTTCCGGCGGGCCGGGCGGCGGCCGCCG CTGGGCCGCGTTCGTCGGCGCGGGCGTGCTCGTCGCGGTCGGCTACATGGACCCCGGCAACTGGGCGACCGCGCTCGCGG GCGGCGCGGGCTACGGCTACGCGCTCCTCGGCGTCGTGATCGCCGCGAGCCTGATGGCGATGCTGCTGCAATGGCTCGCC GCGCGGATCGGCGTCGTGTCCGGGCGCGACCTCGCGCAACTGTGCCGCGAGCGCTTCGACCCGCGCGCGACCGTGCTGCT GTGGATTGCCGCCGAAATCGCGATCGTCGCGTGCGACGTCGCCGAAGTCGTCGGCGCGGCGGTCGCGCTGCAGATGCTGC TCGGCGTGTCGCTGAGCACGGGCGTGCTCGTGTCGGCGGTGGGCACGCTCGCGATGCTCGCGCTCGAGCGGCACGGCCGG CGCACGCTCGAGGCGGCGATCGCATCGCTGATCTTCTTCGTCGGCCTGTGCTTCGTGATCGAGGTCGCGCTCGCGCGGCC CGACTGGCACGCGGCGCTCGCCGGCGCCGCGCCGTCGCCGCGGCTGCTGCGCGAGCCCGGCATGCTGTGGCTCGCGGCCG GCATCCTCGGCGCGACCGTGATGCCGCACAACCTCTACTTGCACTCGATGCTGGTCAAGCATCACGCGAGCGCGCGCGAC GAGCCGTCGATCCGCCGCGCGCTGTTCGGCGTCAATCTCGACACGTTCGTGTCACTCGGATTCGCGTTCGTGATCAACGC GGCGCTTCTCATCGTCGCGGCGGCAGTGTTCCACGCGAGCGGCCACGACGACGTCACCGATCTCGCCGACGCGCACCGGC TGATCGCGCCGCTCGTCGGCAATCGCTGGGCGGGCCCGCTGTTCGCGGCCGCCTTGCTCGCATGCGGGCTGTCGGCAACG GTGACGGGCACGCTCGCCGGCCAGGCGATCATGGAAGGGTTCCTGAAGCTGACGCTGCCGCGCTGGCAGCGCGCGCTCCT CACCCGCGCGCTCGCGATCGGCCCCGCGCTCGCCGCGGTCGGCCTGTTCGGGCAGCACGGATCGAATCAACTGCTCGTCG CGAGCCAGGTCGTGCTGAGCCTGCAATTGCCGCTCGCGATGGTGCCGCTCGTCGTGTTCGCGTCGAGCCGCGCGCTGATG GGGCGCTGGCGGGTCCGCGGCCTGCCGCTCGCGGCCGCATGGATGTGTGCCGCGGCGATCGTGGCGCTGAACGGCGCGCT CGTCTGGCAGGTGGTTGCGGCGGGGTGA
Upstream 100 bases:
>100_bases GCCCGTTCGTCGTTCCGGGTAGGAGGACGCGCGCCCGCCCGTCCGAACGCCGCGCCCGCCGCCCGGCCGTGCACGGCAAA CCGTTGGCCGAACCGCCGCC
Downstream 100 bases:
>100_bases GCGGGTGACGATCGTCGCGATGGGGGCAATCGGCGCCGGCCCGGTGCGGCGCAACGCAACGGGGCGCGACGGCCATTCCG CCGTTCGATTGAAAAACCGC
Product: putative metal-ion transport system, membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MNSRPLAARSPSSRRPSASGGPGGGRRWAAFVGAGVLVAVGYMDPGNWATALAGGAGYGYALLGVVIAASLMAMLLQWLA ARIGVVSGRDLAQLCRERFDPRATVLLWIAAEIAIVACDVAEVVGAAVALQMLLGVSLSTGVLVSAVGTLAMLALERHGR RTLEAAIASLIFFVGLCFVIEVALARPDWHAALAGAAPSPRLLREPGMLWLAAGILGATVMPHNLYLHSMLVKHHASARD EPSIRRALFGVNLDTFVSLGFAFVINAALLIVAAAVFHASGHDDVTDLADAHRLIAPLVGNRWAGPLFAAALLACGLSAT VTGTLAGQAIMEGFLKLTLPRWQRALLTRALAIGPALAAVGLFGQHGSNQLLVASQVVLSLQLPLAMVPLVVFASSRALM GRWRVRGLPLAAAWMCAAAIVALNGALVWQVVAAG
Sequences:
>Translated_435_residues MNSRPLAARSPSSRRPSASGGPGGGRRWAAFVGAGVLVAVGYMDPGNWATALAGGAGYGYALLGVVIAASLMAMLLQWLA ARIGVVSGRDLAQLCRERFDPRATVLLWIAAEIAIVACDVAEVVGAAVALQMLLGVSLSTGVLVSAVGTLAMLALERHGR RTLEAAIASLIFFVGLCFVIEVALARPDWHAALAGAAPSPRLLREPGMLWLAAGILGATVMPHNLYLHSMLVKHHASARD EPSIRRALFGVNLDTFVSLGFAFVINAALLIVAAAVFHASGHDDVTDLADAHRLIAPLVGNRWAGPLFAAALLACGLSAT VTGTLAGQAIMEGFLKLTLPRWQRALLTRALAIGPALAAVGLFGQHGSNQLLVASQVVLSLQLPLAMVPLVVFASSRALM GRWRVRGLPLAAAWMCAAAIVALNGALVWQVVAAG >Mature_435_residues MNSRPLAARSPSSRRPSASGGPGGGRRWAAFVGAGVLVAVGYMDPGNWATALAGGAGYGYALLGVVIAASLMAMLLQWLA ARIGVVSGRDLAQLCRERFDPRATVLLWIAAEIAIVACDVAEVVGAAVALQMLLGVSLSTGVLVSAVGTLAMLALERHGR RTLEAAIASLIFFVGLCFVIEVALARPDWHAALAGAAPSPRLLREPGMLWLAAGILGATVMPHNLYLHSMLVKHHASARD EPSIRRALFGVNLDTFVSLGFAFVINAALLIVAAAVFHASGHDDVTDLADAHRLIAPLVGNRWAGPLFAAALLACGLSAT VTGTLAGQAIMEGFLKLTLPRWQRALLTRALAIGPALAAVGLFGQHGSNQLLVASQVVLSLQLPLAMVPLVVFASSRALM GRWRVRGLPLAAAWMCAAAIVALNGALVWQVVAAG
Specific function: H(+)-stimulated, highly selective, manganese uptake system [H]
COG id: COG1914
COG function: function code P; Mn2+ and Fe2+ transporters of the NRAMP family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NRAMP family [H]
Homologues:
Organism=Homo sapiens, GI295293167, Length=417, Percent_Identity=36.21103117506, Blast_Score=198, Evalue=7e-51, Organism=Homo sapiens, GI295293178, Length=465, Percent_Identity=33.9784946236559, Blast_Score=198, Evalue=8e-51, Organism=Homo sapiens, GI295293175, Length=417, Percent_Identity=36.21103117506, Blast_Score=198, Evalue=8e-51, Organism=Homo sapiens, GI295293173, Length=417, Percent_Identity=36.21103117506, Blast_Score=198, Evalue=8e-51, Organism=Homo sapiens, GI10835169, Length=417, Percent_Identity=36.21103117506, Blast_Score=198, Evalue=8e-51, Organism=Homo sapiens, GI295293171, Length=465, Percent_Identity=33.9784946236559, Blast_Score=198, Evalue=9e-51, Organism=Homo sapiens, GI295293169, Length=465, Percent_Identity=33.9784946236559, Blast_Score=198, Evalue=9e-51, Organism=Homo sapiens, GI109255241, Length=421, Percent_Identity=35.6294536817102, Blast_Score=197, Evalue=1e-50, Organism=Escherichia coli, GI1788736, Length=423, Percent_Identity=37.8250591016548, Blast_Score=255, Evalue=4e-69, Organism=Caenorhabditis elegans, GI193210616, Length=429, Percent_Identity=31.9347319347319, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17569473, Length=377, Percent_Identity=35.0132625994695, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI71999499, Length=443, Percent_Identity=31.3769751693002, Blast_Score=191, Evalue=8e-49, Organism=Caenorhabditis elegans, GI71993856, Length=210, Percent_Identity=36.6666666666667, Blast_Score=136, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6323062, Length=395, Percent_Identity=37.7215189873418, Blast_Score=243, Evalue=6e-65, Organism=Saccharomyces cerevisiae, GI6321841, Length=427, Percent_Identity=36.0655737704918, Blast_Score=215, Evalue=9e-57, Organism=Saccharomyces cerevisiae, GI6324450, Length=419, Percent_Identity=32.6968973747017, Blast_Score=200, Evalue=4e-52, Organism=Drosophila melanogaster, GI24648607, Length=417, Percent_Identity=34.5323741007194, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI281362176, Length=417, Percent_Identity=34.5323741007194, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24648609, Length=417, Percent_Identity=34.5323741007194, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI45553443, Length=417, Percent_Identity=34.5323741007194, Blast_Score=213, Evalue=1e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023056 - InterPro: IPR001046 [H]
Pfam domain/function: PF01566 Nramp [H]
EC number: NA
Molecular weight: Translated: 45109; Mature: 45109
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSRPLAARSPSSRRPSASGGPGGGRRWAAFVGAGVLVAVGYMDPGNWATALAGGAGYGY CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHEEEECCCCCCHHHHHCCCCCHHH ALLGVVIAASLMAMLLQWLAARIGVVSGRDLAQLCRERFDPRATVLLWIAAEIAIVACDV HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AEVVGAAVALQMLLGVSLSTGVLVSAVGTLAMLALERHGRRTLEAAIASLIFFVGLCFVI HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH EVALARPDWHAALAGAAPSPRLLREPGMLWLAAGILGATVMPHNLYLHSMLVKHHASARD HHHHCCCCHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC EPSIRRALFGVNLDTFVSLGFAFVINAALLIVAAAVFHASGHDDVTDLADAHRLIAPLVG CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC NRWAGPLFAAALLACGLSATVTGTLAGQAIMEGFLKLTLPRWQRALLTRALAIGPALAAV CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLFGQHGSNQLLVASQVVLSLQLPLAMVPLVVFASSRALMGRWRVRGLPLAAAWMCAAAI HHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHH VALNGALVWQVVAAG HHHCCHHHHHEEECC >Mature Secondary Structure MNSRPLAARSPSSRRPSASGGPGGGRRWAAFVGAGVLVAVGYMDPGNWATALAGGAGYGY CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHEEEECCCCCCHHHHHCCCCCHHH ALLGVVIAASLMAMLLQWLAARIGVVSGRDLAQLCRERFDPRATVLLWIAAEIAIVACDV HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AEVVGAAVALQMLLGVSLSTGVLVSAVGTLAMLALERHGRRTLEAAIASLIFFVGLCFVI HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH EVALARPDWHAALAGAAPSPRLLREPGMLWLAAGILGATVMPHNLYLHSMLVKHHASARD HHHHCCCCHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC EPSIRRALFGVNLDTFVSLGFAFVINAALLIVAAAVFHASGHDDVTDLADAHRLIAPLVG CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC NRWAGPLFAAALLACGLSATVTGTLAGQAIMEGFLKLTLPRWQRALLTRALAIGPALAAV CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLFGQHGSNQLLVASQVVLSLQLPLAMVPLVVFASSRALMGRWRVRGLPLAAAWMCAAAI HHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHH VALNGALVWQVVAAG HHHCCHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]