| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719187
Identifier: 53719187
GI number: 53719187
Start: 1802147
End: 1802350
Strand: Reverse
Name: 53719187
Synonym: BPSL1553
Alternate gene names: NA
Gene position: 1802350-1802147 (Counterclockwise)
Preceding gene: 53719188
Following gene: 53719183
Centisome position: 44.23
GC content: 61.76
Gene sequence:
>204_bases ATGACCTCGAATCTTCACGACAAACCCGACAGCCCGTGCATCGGCGTCTGCTCGACGCTCTTCGACGAAGTCTGCAAAGG CTGCGGGCGCACGGCGCTCGAAGTCGCGAACTGGGTGTTCATGACGGACGCCGAAAAGCAGGCGGTGTGGGAGCGCATCA CGCGCGAAGGCACCGCAATGCGCTTCCAGTACGACAAGCTGTAG
Upstream 100 bases:
>100_bases CCTTGCGGGCCGCCGCGGCCGGCTGCGCAGGACGTTTCGCGCACATGCTTTAACATAGCGGCTGGCCGCTCGCGCGGCGA TCACCGAATTCCATGCTCCG
Downstream 100 bases:
>100_bases GCGTGCCGCGCACCACCGCGGCGCGCACGCATTCGATCAGCATACCGAAACGAACGCATTAAAAAAAAGGACGGCACGCA TGAAGCCGTGCCGCCAACCC
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Hypothethical Protein DUF
Number of amino acids: Translated: 67; Mature: 66
Protein sequence:
>67_residues MTSNLHDKPDSPCIGVCSTLFDEVCKGCGRTALEVANWVFMTDAEKQAVWERITREGTAMRFQYDKL
Sequences:
>Translated_67_residues MTSNLHDKPDSPCIGVCSTLFDEVCKGCGRTALEVANWVFMTDAEKQAVWERITREGTAMRFQYDKL >Mature_66_residues TSNLHDKPDSPCIGVCSTLFDEVCKGCGRTALEVANWVFMTDAEKQAVWERITREGTAMRFQYDKL
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7602; Mature: 7471
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNLHDKPDSPCIGVCSTLFDEVCKGCGRTALEVANWVFMTDAEKQAVWERITREGTAM CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCE RFQYDKL EEECCCC >Mature Secondary Structure TSNLHDKPDSPCIGVCSTLFDEVCKGCGRTALEVANWVFMTDAEKQAVWERITREGTAM CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCE RFQYDKL EEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA