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The map label for this gene is yccA [C]

Identifier: 53719143

GI number: 53719143

Start: 1747645

End: 1748358

Strand: Reverse

Name: yccA [C]

Synonym: BPSL1509

Alternate gene names: 53719143

Gene position: 1748358-1747645 (Counterclockwise)

Preceding gene: 53719161

Following gene: 53719141

Centisome position: 42.91

GC content: 63.59

Gene sequence:

>714_bases
ATGTTAGGAGAAACCATGAACGACTATCCGTACAACTTCGGCCGCGGCGGCGCGATCGGCACGGCCGAGACCCGCAACCG
CGTGCTGCGCAACACCTACTGGCTCCTCGCGCTGTCGATGGTGCCGACCGTGCTCGGCGCCTGGGTCGGCGTCGCGACGG
GTTTCTCGCTGTTCGCCGCGACGAGCCCGATGATGAGCCTCCTCGCGTTCTTCGCGATCGCGTTCGGCTTCATGTTCGCG
ATCGAGCGCACGAAGAACAGCTCGGCCGGCGTGTTCGTGCTGCTCGGCTTCACGTTCTTCATGGGCCTGATGCTGTCGCG
CCTCTTGAGCTTCATCCTCGGCTTCTCGAACGGCCCGTCGCTCATCATGCTCGCATTCGGCGGCACCGGCGTGATCTTCG
CCGCGATGGCGACGGTCGCGACCGTCAGCAAGCGCGACTTCTCGGGCCTCGGCAAATGGCTCTTCGTCGGCGTGATCGTG
CTGCTGCTCGCGATGGTCGCGAACATGTTCCTGCAACTGCCGGCGCTGATGCTGACCGTGTCGGTGCTCGCGATCGTGAT
CTTCTCGGCGTACATGCTGTTTGACGTCCAGCGCGTCGTGAACGGCGGCGAGACGAATTACATCAGCGCGACGCTCGCGA
TCTACCTCGATCTGTACAACGTGTTCACGAACCTGCTCGCGCTGCTCGGCATCTTCGGCGGCAACCGCAACTGA

Upstream 100 bases:

>100_bases
GTTGAAACCTCCGCCGTCGAAACCTATCTTAGGGGTAGCGGCCACACGGCTTTTTGCGACGCAACACGCGCGTCGCCCGC
CGGCGGCGCCGCCACGTTCC

Downstream 100 bases:

>100_bases
AGGCCGGCGCCCCCTGCCCCAAAACCGGCCTTCGGGCCGGTTTTTTTCATGCACGCGCCACCCGGCTCCCGCGTCAATCG
CGCTCGAACAGCGCGATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MLGETMNDYPYNFGRGGAIGTAETRNRVLRNTYWLLALSMVPTVLGAWVGVATGFSLFAATSPMMSLLAFFAIAFGFMFA
IERTKNSSAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLAFGGTGVIFAAMATVATVSKRDFSGLGKWLFVGVIV
LLLAMVANMFLQLPALMLTVSVLAIVIFSAYMLFDVQRVVNGGETNYISATLAIYLDLYNVFTNLLALLGIFGGNRN

Sequences:

>Translated_237_residues
MLGETMNDYPYNFGRGGAIGTAETRNRVLRNTYWLLALSMVPTVLGAWVGVATGFSLFAATSPMMSLLAFFAIAFGFMFA
IERTKNSSAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLAFGGTGVIFAAMATVATVSKRDFSGLGKWLFVGVIV
LLLAMVANMFLQLPALMLTVSVLAIVIFSAYMLFDVQRVVNGGETNYISATLAIYLDLYNVFTNLLALLGIFGGNRN
>Mature_237_residues
MLGETMNDYPYNFGRGGAIGTAETRNRVLRNTYWLLALSMVPTVLGAWVGVATGFSLFAATSPMMSLLAFFAIAFGFMFA
IERTKNSSAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLAFGGTGVIFAAMATVATVSKRDFSGLGKWLFVGVIV
LLLAMVANMFLQLPALMLTVSVLAIVIFSAYMLFDVQRVVNGGETNYISATLAIYLDLYNVFTNLLALLGIFGGNRN

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787205, Length=207, Percent_Identity=37.6811594202899, Blast_Score=130, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 25574; Mature: 25574

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGETMNDYPYNFGRGGAIGTAETRNRVLRNTYWLLALSMVPTVLGAWVGVATGFSLFAA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSPMMSLLAFFAIAFGFMFAIERTKNSSAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LIMLAFGGTGVIFAAMATVATVSKRDFSGLGKWLFVGVIVLLLAMVANMFLQLPALMLTV
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVLAIVIFSAYMLFDVQRVVNGGETNYISATLAIYLDLYNVFTNLLALLGIFGGNRN
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLGETMNDYPYNFGRGGAIGTAETRNRVLRNTYWLLALSMVPTVLGAWVGVATGFSLFAA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSPMMSLLAFFAIAFGFMFAIERTKNSSAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LIMLAFGGTGVIFAAMATVATVSKRDFSGLGKWLFVGVIVLLLAMVANMFLQLPALMLTV
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVLAIVIFSAYMLFDVQRVVNGGETNYISATLAIYLDLYNVFTNLLALLGIFGGNRN
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]