| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is zntR [C]
Identifier: 53719128
GI number: 53719128
Start: 1732557
End: 1733057
Strand: Reverse
Name: zntR [C]
Synonym: BPSL1494
Alternate gene names: 53719128
Gene position: 1733057-1732557 (Counterclockwise)
Preceding gene: 53719129
Following gene: 53719127
Centisome position: 42.53
GC content: 70.66
Gene sequence:
>501_bases ATGAGCGATGCCCCGCCCACCCTGCTTCTGACCGTGCGCGACGCCGCCGAGCGGCTCGGCGTGACGCCGCGCACGCTCAA GTACTACGAGGAGCGCGGGCTCGTCACGCCGTCGCGCAGCGAGGGCCGCTATCGGCTGTATGACGCCGCGGACCTCGAAC GCTTCGAGCGCATCCTGCGGCTGCGCGCGCTCGGGTTCTCGCTGCACGGCATCACGGAAATGCTCAAGCGCCCGCTCGAG CCGGCAGGCGACGGGCGGCGGCGCTATTCGGACGCATCGTTGCGTGACATTCACGCGGATCTGTCGCAGCAGATCGCGAC GCTCGACGCGCGCATCGCCGCCGCGCAGCGCGAACTGAAGGAAGTGCGCGCGCTGAAGCAGGAGTTGCAGCACGACATCG ACTATGTCGAGCGCCGGCTCGCCGGCGAAAACGCCGACGAGCTGATCGCGCAGCGCCGCGCCGCCGCGCGCGCGCGCAAG ACGGGCGGGACAAGCGCATGA
Upstream 100 bases:
>100_bases CTCGCCGGGCGGTTTTTTTATCGCCAAACATATACGTGAACGTACACGTTGATCTATAATCGCGAACATCGATCCTTCGT CATCCGGAGAATGCCGCGCC
Downstream 100 bases:
>100_bases GTGCCGCGCCGGGCCGACCGCCGCTCTGGAGCGCCGCGAACCTGCGCGGCGATTTCTTTCCATGGGTGCTCGCGATCGTC ACCGGCCTCGATTACTTCGA
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MerR Family
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSDAPPTLLLTVRDAAERLGVTPRTLKYYEERGLVTPSRSEGRYRLYDAADLERFERILRLRALGFSLHGITEMLKRPLE PAGDGRRRYSDASLRDIHADLSQQIATLDARIAAAQRELKEVRALKQELQHDIDYVERRLAGENADELIAQRRAAARARK TGGTSA
Sequences:
>Translated_166_residues MSDAPPTLLLTVRDAAERLGVTPRTLKYYEERGLVTPSRSEGRYRLYDAADLERFERILRLRALGFSLHGITEMLKRPLE PAGDGRRRYSDASLRDIHADLSQQIATLDARIAAAQRELKEVRALKQELQHDIDYVERRLAGENADELIAQRRAAARARK TGGTSA >Mature_165_residues SDAPPTLLLTVRDAAERLGVTPRTLKYYEERGLVTPSRSEGRYRLYDAADLERFERILRLRALGFSLHGITEMLKRPLEP AGDGRRRYSDASLRDIHADLSQQIATLDARIAAAQRELKEVRALKQELQHDIDYVERRLAGENADELIAQRRAAARARKT GGTSA
Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18755; Mature: 18623
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAPPTLLLTVRDAAERLGVTPRTLKYYEERGLVTPSRSEGRYRLYDAADLERFERILR CCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHH LRALGFSLHGITEMLKRPLEPAGDGRRRYSDASLRDIHADLSQQIATLDARIAAAQRELK HHHHCCHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVRALKQELQHDIDYVERRLAGENADELIAQRRAAARARKTGGTSA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SDAPPTLLLTVRDAAERLGVTPRTLKYYEERGLVTPSRSEGRYRLYDAADLERFERILR CCCCCEEEEEHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHH LRALGFSLHGITEMLKRPLEPAGDGRRRYSDASLRDIHADLSQQIATLDARIAAAQRELK HHHHCCHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVRALKQELQHDIDYVERRLAGENADELIAQRRAAARARKTGGTSA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA