| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719124
Identifier: 53719124
GI number: 53719124
Start: 1727666
End: 1729504
Strand: Reverse
Name: 53719124
Synonym: BPSL1490
Alternate gene names: NA
Gene position: 1729504-1727666 (Counterclockwise)
Preceding gene: 53719125
Following gene: 53719123
Centisome position: 42.45
GC content: 69.66
Gene sequence:
>1839_bases GTGCCGGCCGGCGCGTCTACAATGCCGGATGCCCGAAACCGCCCGCCGCTCGCGCGCCGGCATGTCGTCCATCCTCTTGC CCCCATCTGCATGAAGCCTGTCGTTCGCCTTACCGCTTCCGCCACCCGCGCGCTGCCGCGCTGGCTGCTGCTCACGCTCT GCATCGTCTACGCGGCGTTCGGGCTGTTCGGCCGCGATCCGTGGAAGAACGAGGACGCGGCAGGCTTCGGCGTGATGTGG ACGATGGCGCAAGGCGGCCTGCACGACTGGCTGCTGCCCAATCTCGTCGGCAAATTCGTCACGTCCGACGGGCCGCTCGG CTACTGGCTCGGCGGCCTCGCGATTCGCGCGCTGCCGTGGGTCGACGCGAGCAACGCGTCGCGCGTCTACACGGGTGTGC TGTTCTGCGTCGCGTGCGCATTCGTCTGGTACGCGGCCTATCTGCTCGGCCGGCGCGCCGAGATCCAGCCGTTCAAGTAC GCGTTCGGCGGCGAGCCCGAGCCGCGCGACTACGGGCGCACGCTCGCCGACGGCGCGCTGCTCGTGCTGCTCGCGTGCTT CGGCCTTGCCGAGCGCGGCCACGAAACGACGCCGCAGCTCGCGCAGTTCGCATGCATCGCGACGTTCGTCTACGGACTCG TGCGCGCGATCGACAAGCCGACGCAAGGCGCGCTCTGGTGGGGCCTCGCGCTCGGCCTCGTCGCGCTGTCGGGCAACCCG GTGCTCGTCGCCGCGCTCGCGCTCGGCACGCTCGCGCTCTATCTCGTCACGCCCGAGATCCGCTGCGTGCAACTGCCGGC GATCGGGCTGCCGCTCGCCGTGGCCGTGTTCGCGATCTGGCCGCTCGCCGCGTACATCGCGTTTCCCGACGACGCGAACT GGTTCTTCAACCAATGGCTGCACGGCAGCCTGATGCGCTTCTCCGGCCCGCCCACGACGGTGCTCGCGTACGCGGCGAAG AACCTGCCGCTCTTCACGTGGCCCGCGTGGCCGCTCGCGATCTGGGCATGGGTGAGCTGGGCGGGGCTGCGCCGCCGGCC GCACATCGCGATTCCGCTGTCGGTCGCCGCGCCGCTCCTCGCGCTCGTGATCCTGCAGAGCCAGCAGACGAACCGGATGT ACATGCTGCTGCTGCCCGCCCTCGCCGTCATCGCGACGTTCGCGCTGCCGACGCTCAAGCGCGGCGCGATCAACGCGATC GACTGGTTCGCGGTGCTGAGCTTCACGATCCTCGGCACGTTCGTGTGGCTCGTGTGGCTCGCGTCGCTCACGGGCTTCCC GCATCCGCTCGCGCGCAACCTCGGCCGCCTGGTGCCGGGCTACGAGCCGCACTTCAAGGTGCTGTCGTTCGTGTGCGCGG TCGCCGCGACCGCATGCTGGCTGATGCTCGTGCGCTGGCGCATCTCGCGGCAGCCGAAGGTGCTCTGGCGCAGCGTGGTG CTGTCGAGCGCCGGCACGACGCTGATGTGGGTGCTGCTGATGACGCTGTGGCTGCCGATCGTCAATTACAGCCGGACCTA TCGCGACGTCGCGCAGCAGATCGCCGCGCACCTGCCGTCCGATTACGAATGCATCTCGCCCGTGCGGCTCGGCGACGCGC AGATCGCGACGTTCGCGTATTTCGGCGACATGCACTTCTCGTTCACCGACGACTGCGACGTGATCCTGCGCCAGGATCGC GCGGACTTCGGCGAGCCGAGTTCGATCTCGCAATACGTGTGGCGCCTCGTGTGGGAAGGCCGCCGCGTCGCCGACCGCGA CGAGCGCTTCCGCCTGTACGAACGAATCGAGCGCCCGAAGACGCCCGTCAAGCGCCGCCCGCCGCGCAAAGCCCGCTGA
Upstream 100 bases:
>100_bases CGGGCCGGTTCCGCAAGAAAGGCAGCCCAGGCTGCCTTTTTTTATCCCTGTCGATCCCGCGCGCCACCGGTGCCGCGCGG GCCCGCCGATTCGCTGACGC
Downstream 100 bases:
>100_bases CCGATGTTCGGCGACATCCGCCGGATCGCCGGTCTCGCCTGGCCGGTGCTCGTCGGCCAGCTCGCGATCATCGCGTTCGG CGTGATCGATACCGCGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Inner Membrane Protein; Glycosyl Transferase Family Protein; Glycosyltransferase; Glycosyl Transferase Family; PMT Family Glycosyltransferase; Glycosyltransferase Pmt Family
Number of amino acids: Translated: 612; Mature: 611
Protein sequence:
>612_residues MPAGASTMPDARNRPPLARRHVVHPLAPICMKPVVRLTASATRALPRWLLLTLCIVYAAFGLFGRDPWKNEDAAGFGVMW TMAQGGLHDWLLPNLVGKFVTSDGPLGYWLGGLAIRALPWVDASNASRVYTGVLFCVACAFVWYAAYLLGRRAEIQPFKY AFGGEPEPRDYGRTLADGALLVLLACFGLAERGHETTPQLAQFACIATFVYGLVRAIDKPTQGALWWGLALGLVALSGNP VLVAALALGTLALYLVTPEIRCVQLPAIGLPLAVAVFAIWPLAAYIAFPDDANWFFNQWLHGSLMRFSGPPTTVLAYAAK NLPLFTWPAWPLAIWAWVSWAGLRRRPHIAIPLSVAAPLLALVILQSQQTNRMYMLLLPALAVIATFALPTLKRGAINAI DWFAVLSFTILGTFVWLVWLASLTGFPHPLARNLGRLVPGYEPHFKVLSFVCAVAATACWLMLVRWRISRQPKVLWRSVV LSSAGTTLMWVLLMTLWLPIVNYSRTYRDVAQQIAAHLPSDYECISPVRLGDAQIATFAYFGDMHFSFTDDCDVILRQDR ADFGEPSSISQYVWRLVWEGRRVADRDERFRLYERIERPKTPVKRRPPRKAR
Sequences:
>Translated_612_residues MPAGASTMPDARNRPPLARRHVVHPLAPICMKPVVRLTASATRALPRWLLLTLCIVYAAFGLFGRDPWKNEDAAGFGVMW TMAQGGLHDWLLPNLVGKFVTSDGPLGYWLGGLAIRALPWVDASNASRVYTGVLFCVACAFVWYAAYLLGRRAEIQPFKY AFGGEPEPRDYGRTLADGALLVLLACFGLAERGHETTPQLAQFACIATFVYGLVRAIDKPTQGALWWGLALGLVALSGNP VLVAALALGTLALYLVTPEIRCVQLPAIGLPLAVAVFAIWPLAAYIAFPDDANWFFNQWLHGSLMRFSGPPTTVLAYAAK NLPLFTWPAWPLAIWAWVSWAGLRRRPHIAIPLSVAAPLLALVILQSQQTNRMYMLLLPALAVIATFALPTLKRGAINAI DWFAVLSFTILGTFVWLVWLASLTGFPHPLARNLGRLVPGYEPHFKVLSFVCAVAATACWLMLVRWRISRQPKVLWRSVV LSSAGTTLMWVLLMTLWLPIVNYSRTYRDVAQQIAAHLPSDYECISPVRLGDAQIATFAYFGDMHFSFTDDCDVILRQDR ADFGEPSSISQYVWRLVWEGRRVADRDERFRLYERIERPKTPVKRRPPRKAR >Mature_611_residues PAGASTMPDARNRPPLARRHVVHPLAPICMKPVVRLTASATRALPRWLLLTLCIVYAAFGLFGRDPWKNEDAAGFGVMWT MAQGGLHDWLLPNLVGKFVTSDGPLGYWLGGLAIRALPWVDASNASRVYTGVLFCVACAFVWYAAYLLGRRAEIQPFKYA FGGEPEPRDYGRTLADGALLVLLACFGLAERGHETTPQLAQFACIATFVYGLVRAIDKPTQGALWWGLALGLVALSGNPV LVAALALGTLALYLVTPEIRCVQLPAIGLPLAVAVFAIWPLAAYIAFPDDANWFFNQWLHGSLMRFSGPPTTVLAYAAKN LPLFTWPAWPLAIWAWVSWAGLRRRPHIAIPLSVAAPLLALVILQSQQTNRMYMLLLPALAVIATFALPTLKRGAINAID WFAVLSFTILGTFVWLVWLASLTGFPHPLARNLGRLVPGYEPHFKVLSFVCAVAATACWLMLVRWRISRQPKVLWRSVVL SSAGTTLMWVLLMTLWLPIVNYSRTYRDVAQQIAAHLPSDYECISPVRLGDAQIATFAYFGDMHFSFTDDCDVILRQDRA DFGEPSSISQYVWRLVWEGRRVADRDERFRLYERIERPKTPVKRRPPRKAR
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68192; Mature: 68061
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAGASTMPDARNRPPLARRHVVHPLAPICMKPVVRLTASATRALPRWLLLTLCIVYAAF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLFGRDPWKNEDAAGFGVMWTMAQGGLHDWLLPNLVGKFVTSDGPLGYWLGGLAIRALPW HHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC VDASNASRVYTGVLFCVACAFVWYAAYLLGRRAEIQPFKYAFGGEPEPRDYGRTLADGAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHH LVLLACFGLAERGHETTPQLAQFACIATFVYGLVRAIDKPTQGALWWGLALGLVALSGNP HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC VLVAALALGTLALYLVTPEIRCVQLPAIGLPLAVAVFAIWPLAAYIAFPDDANWFFNQWL HHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH HGSLMRFSGPPTTVLAYAAKNLPLFTWPAWPLAIWAWVSWAGLRRRPHIAIPLSVAAPLL HCCHHHCCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH ALVILQSQQTNRMYMLLLPALAVIATFALPTLKRGAINAIDWFAVLSFTILGTFVWLVWL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ASLTGFPHPLARNLGRLVPGYEPHFKVLSFVCAVAATACWLMLVRWRISRQPKVLWRSVV HHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LSSAGTTLMWVLLMTLWLPIVNYSRTYRDVAQQIAAHLPSDYECISPVRLGDAQIATFAY HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEE FGDMHFSFTDDCDVILRQDRADFGEPSSISQYVWRLVWEGRRVADRDERFRLYERIERPK ECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC TPVKRRPPRKAR CCCCCCCCCCCC >Mature Secondary Structure PAGASTMPDARNRPPLARRHVVHPLAPICMKPVVRLTASATRALPRWLLLTLCIVYAAF CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLFGRDPWKNEDAAGFGVMWTMAQGGLHDWLLPNLVGKFVTSDGPLGYWLGGLAIRALPW HHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC VDASNASRVYTGVLFCVACAFVWYAAYLLGRRAEIQPFKYAFGGEPEPRDYGRTLADGAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHH LVLLACFGLAERGHETTPQLAQFACIATFVYGLVRAIDKPTQGALWWGLALGLVALSGNP HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC VLVAALALGTLALYLVTPEIRCVQLPAIGLPLAVAVFAIWPLAAYIAFPDDANWFFNQWL HHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH HGSLMRFSGPPTTVLAYAAKNLPLFTWPAWPLAIWAWVSWAGLRRRPHIAIPLSVAAPLL HCCHHHCCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH ALVILQSQQTNRMYMLLLPALAVIATFALPTLKRGAINAIDWFAVLSFTILGTFVWLVWL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ASLTGFPHPLARNLGRLVPGYEPHFKVLSFVCAVAATACWLMLVRWRISRQPKVLWRSVV HHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LSSAGTTLMWVLLMTLWLPIVNYSRTYRDVAQQIAAHLPSDYECISPVRLGDAQIATFAY HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEE FGDMHFSFTDDCDVILRQDRADFGEPSSISQYVWRLVWEGRRVADRDERFRLYERIERPK ECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC TPVKRRPPRKAR CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA